Dlim022094.2
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- kn
- Assembly
- GCA_963924055.1
- Location
- OZ001355.1:560586-563398[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-138 1.7e-134 449.9 0.0 183 385 87 318 83 321 0.99 2 2 3e-06 0.012 14.6 15.5 425 518 324 416 319 436 0.59
Sequence Information
- Coding Sequence
- atgttgctgctgctgggtaTATTTTACCATTTAAATGCGCGACACACGGGTGTCAATTTCGAATATCCTGCCTGCAGGACATCCCATTCACATAACTGTCACCCCAAGTCCAACTACGACtctgactccgactccgactccatGTCCGTGTCCATATCCGAGTCCGTATCCGAGTCCATGCTCGGCGCTTATCGCACGCTGCGATGCCTCGGGCGAGCACAGGGATGTGGCAGCAGCGAGGGCAAGTGGCGGCTCTTCTTTTTCCTCAAGTTCTTCTTGAAGTGCAATCAGAATTGCCTGAAAAATGCAGGAAACCCGCGGGACATGAGAAGATTTCAGGTCGTCATATCCACCCAAGTGGCCGTTGACGGTCCACTGCTGGCCATCTCGGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGGCGCGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCTCCGCTGCCCGTTGCCACGCCTTGCATTAAGGCGATCTCGCCCAGCGAGGGCTGGACCACAGGTGGCGCCACCGTGATTATTGTGGGCGACAATTTCTTTGACGGATTGCAGGTGGTCTTTGGCACGATGCTGGTGTGGAGTGAGCTCATCACATCGCACGCGATACGGGTCCAGACGCCGCCACGTCACATCCCCGGCGTAGTCGAGGTGACGCTTTCCTACAAGAGCAAACAGTTCTGCAAGGGATCACCCGGACGCTTCGTCTATGTCTCAGCACTCAACGAACCCACTATCGACTACGGCTTTCAGCGTCTGCAGAAGCTCATACCCCGTCACCCCGGGGATCCGGAGAAGCTTCAAAAGGAGATCATCCTCAAGCGCGCTGCGGACCTCGTGGAGGCCCTCTACTCCATGCCCAGATCGCCAGGCGGCTCCACCAGCTTCAACTCCTACGCCGGCCAGCTGGCGGTGAGCGTGCAGGACGGATCCGGTCAGTGGACGGAAGACGACTACCAGCGCGCCCAATCCAGCAGCGTCAGTCCTCGCGGCGGCTACTGCAGCAGCGCCTCGACGCCCCACAGCTCAGGTGGCTCCTATGGCGCCTCAGCAGCCACCGCCGCCGTTGCCGCCTCCGCAAATGGATATGCGCCAGCACCGAATATGGGCACCCTCTCCTCGTCGCCGGGCAGCGTTTTCAACTCCACCTCAATGTCCGTATCGACGCCTTGGCATTCGGCGCTCGTTCAGCATCATCATGCGGCCGCCACCCACCCGCACCATTATCCGCATCCCCACCAGCCCTGGCATAATCCCGCCGTGTCAGCAGCGACTGCGGCGGCCGTTTAA
- Protein Sequence
- MLLLLGIFYHLNARHTGVNFEYPACRTSHSHNCHPKSNYDSDSDSDSMSVSISESVSESMLGAYRTLRCLGRAQGCGSSEGKWRLFFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASAATAAVAASANGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHAAATHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00521135;
- 90% Identity
- iTF_00510322;
- 80% Identity
- -