Dlim020026.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- JARID2
- Assembly
- GCA_963924055.1
- Location
- OZ001354.1:11916650-11924699[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-22 2.1e-18 67.1 0.0 6 89 1884 1965 1879 1965 0.92
Sequence Information
- Coding Sequence
- ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGTAAGGAGACCGAGACACCGCCAACGTCATCgtcagcggcggcagcagtaGCGTTGGCTGTAGAGTCATCACCCGAGATGCCTAAAAGAACGAAGGTGCAGGCACAGCGTAAATTTGCACAAGGCCAAAATGCGCCCAGTTCAGCAGGTGCCTACAGCGCTGCCAGtgtagcagcagcggcggcggcagcagcagcagcatccgGACCGAGTACCTCTGGAGACAGTCTTCAGCCACCGATTGAGATACTTCCCAACAAGTGTCCCAAGCCGCAGGATTTCTTAACATTTCTGTGTTTTCGCGGCACACCCGCATTGCCCGCGCACTTGGATTATCTGAATCAGGGCAAGTCTAAAACAAACGAAGTTCCgcccaaaagcagcagcatcaacgacaacaataacaagaagaaaaacaacagcaacaacagcaaaaagaaACGTGGTAGACCcgccaaaacaacaacaggaaaaaaatcaagtgatgaacaccaacaacaacaacagttgccagCTGATCAAACTGATAAAGCAGCAAGTGATAAAATTGAAGCAACAACGtcgcctcctcctcctcatccCCTAGTGGGTGCAGTGCGTAAGCGAGCCGAGGTGATTACAGAGGGGAACAGACGAGGAGCACGACGCACGGAGACATTGAAACGACGCTCAAATAGGGCCAATAACAAGGATAAGGATGATGACcatgagcagcagctgcagcagcagaatAATGAAGACGATGCTGAGGAGGAGGATGACGAGGATGAATTCTTTTCAGCGCACGATGCGAGCTCACGCAATGGCGGTGCTGATGAGACACTTTCCAAGTCGGAGATCACAAGTTCGAATGTTAAGCGTGGTCGCAATCAGGCAGCACTAACCAGAAAAGCAGCTGCAGCATCACCAGCTGCCACAGAGAGCAGTGTTACGAAGGATAAGGAAAAGGCGCCCGTAAAACGTGTGCGACAACGTGAATCACCCATATTTATACCATCACCAGAATCATCTGGACGCATGACACGACAACGTGCTTTTTTTGAGCCCGTCAAGGTGATGCCAAAGCAGCCAGAACCAGAGGAGCAAGAGAAGCAGGTGAAAGAAGAAAAGGAGTTGAAGGAGGAGCTACAAGAGGAAAAACAACCGCCCAAGAAAGCAACTGACTCAGGAACTGCTGGaaataagcaacaacagctcaaCAAGGAGAAGACAAACTCCAGCATTTATGCCAAAGATGCtgccaagcagcagcagcagcaactggagAATGGAGGCACTGCGTCCGCTATTGCCGCTGAGCAACAAAAGGGTCTTAATGTCTTTGACTTTAGCTCGGATGATGAGCAGCCATTAGCCAAGTCCATAAAGCTGAAAAAGGGCGCCAAAAAAGgtgcaacaacagcggcagctGCAACAGTTTCAGCACGTGGACGTAAATCCGCTGGAGGTGCAGCCAAGAAGCAACAAGAACAGCGGGAAGAGGAGAAAGTGGAGACCACAGCAAGCAAAACAGAAGAACAGCCAAAAACAAAGCGGGGCAAGGCGCTTAAAAAGAAAGCAGACGAGGAACATTTAGAAAAAGATCTGGAGCAACAGCAAGAGAAAAAGGAGctcgaggaggaggaggagcagctgTCACCACCCCAGTCCAAGAAGCAGAGCAATAGCCAACACAATGCACGTCCAGTGCGTCGTCAGGCGCAAGTCAAAGCGACCAAAGCTCAAGCTGAACGTTCCGTGAGTCCAAGTCCACAGCGAAGTCAGCGGCCATCGCGTAAGACAAAAGAAGCGGCAGCCATATACATGGGCATCATTGGTCACAAGCTGCAGCTGGCGGATGACGAGGAGGATGACCTCTCGCTAAGCAGCTTTCCCGACATACCCAATGTCAAGGAAATGGAGAAAATGGAAAAGGAAATCAAGAAGAATGCGGCGGGCAAAACAAGTGAAGTTGCGACGAGAAAAAAGTCACCCAGCAAcaagacagcagcagcagcaacagaaaccGTAGCAGCagcacctgttgctgttgtggagCAAGTGCAGCCGGAGacaacagtagcaacaacaacagcacctcGACGTGGCAGACCACCAAAGCAGGCAAAAGCTGCTGCAACAACctcggcagcaacaacatcaggagcagcagcaacaggcaaGCCTCAAATTGAGGGAATGCTGGTTAAAAAGGGCGCATTGGCGCTGGCAAAAGCAAAGTccgaacagcaacaacaacaacatcaacaacaaaaagtcgATTCCGATGCGGAGGAAGATTTTTTAATCAACGAGGAGCTAAACGAAACGAAGCGTAAGTTGGAAAAGAGTTTTAGTGACTCGGATGATGAACCATTGGCCATAAAAgtgccaacagcagcagcaacaacaacagcaggagcagcagcagcaacaccagccaaagccagcaacagcagcagcaaattaGAAACTactccaacaacagcagcaacggttgcagcaactacagcagcagcagcagcacccaCAACAACTGCTGCCACAActgcagcagtagcagcaacaacaactcttGCAACAACCACATTAAACTGCACGCCGCCCAAGCAACAAtcacaagcacaacaacaaccgttGCAActaccacaacaacaacagcagcaaccatCGTTAGCGTCACAGTTGGGCATGTCTgtaagtgccacgcccacaacgcAACTAACAATGTTGCCGCTGACAGCGAAGCCAACACAATTTTCGATATCTCCGCCGAGTTATGCGCCTCTGAAGACAATGGAAAAGAAATCACCAGTGCCCACATCAAAGATTCTTAATGTGCCAGCAACATATGCGTTGCCGGGAACAGGTGCGGGATTAGGAGCTGTTGGTTTTGCCAAGACGACGTCGTATTTGCCACAAGCATCGCCGCATTATCATACGCCATATGTGCGACCAGCAACATTTGTTGCGGCAGCTGCTTCTGCCGTTGGCAACAAGACGCCGCAACAGCAAATGACGGCAACATtggcaacaacgacaacagtgACATCGCCATTGAAATATCAAACACCGCCCACCACGTATCCGCCACCAATTGAGGCGTATCAATGTCCCAAAATTAATCCAAATTTTTTAACGCCCAAATATGATCGTAGCAGCGTTTTGCCGCgcgccaacaacagcagcagtagcaacagcaacaacaccagcaataTTAACAATTTCACGTCTCCAACTGTGGCACGTGCCACACTGAGTAGCTTAAGTAGTCCAGTTGGTGTGGCAGCTACTGTGAAAAGTGTCCTGCCGCCTCCTGTTGTCAGTCAGGGTCAGAGTTTGAATTTGAGTCTGCCAGCTGTGGCAtccacatcagcagcagcggcggctgctgtgcaacagcaacagcagcaacaacaacaccatcatcagcaacagcagcagcaacaacagcagcagcagcaacagttgttggcacaaaacagcaacaacaatgcagctgcaacagtaagtgcaactgcaacagatCCGTTGAAAGATGAAATTGGCAGCATTTTGGCCCAGGCAACACTCATGCCCAGCAAAGAGGAATCCGGCAAGATCTTTGGCATTGCCAGCGTGAGTCTGGCACAAAGTTCCGGACCGGATAACACGAAATGCACGCTGGGTAAATGCGGATCCATACATAAACCAGTGCTGGGTCCCGTGGTGCCCACAGAGGGTTACTTTGGCGATCAGTTAACCAGCAAGGAGCGACGCAAGGCCAAGGTGAATATGACCCATGAACAGATACAGAAATGGCTCATCGAGTGCAGCTCGAATCCCGACGAGATTCAGGATGATCTCGATGATGAGTTCGACGAGAGCATGAGACCCCAACAGGCACAAACGCCGCCAGGACCAGGTGCAACACGCGATGACAAGGAGAGCACAAGTTTTAGCAGCTCGTCGAATAAGACACGTGGCGAGCTGGGCAAAAGCGAAAGTGCCTGGTCAGCCAAGGGACCATCGTTGAAGGCAACTCCCGTCCTGGTTAGcacggcagcggcagcaacagctgccgcCGAGTCGGATGCCTTGGACTTTGACAAGTGTGTGACGGCTGTGAATCTGACACAGAAATCACAGCTAGATAGCGATAAGAAATTGCCCGATAAAAAGGTCAAGAATACAGCCAGCAACAGTGTCAAGGCAACTGTTGCAagcgccacaacaacaaccacagcagcaacaacagccggCAGCAAGCGTAGCGCAGCAGCAACGCCCACAGCGAGTCCAACGCCGCCCATTAAACAAAAGGCAGGCAACAAAAAGAATGCAAcaagtgcaacagcagcagcagcaacaacaacaacaacagcagcaactacaacaccTACCAAGCGCACGCCTGTCTATCAGAATCAGAGCAATAAAAGCAAGGCACAATTGCAGCTGGacaacaagcagcaacaacaacagcagcagcaactgctacaacgacaacagcaaacGGCAAAGACAACAAAATCGATCTATGTCTTTGGCAAGGATgaagagacaacaacaacagcaactgttgctgccagCAAAGCAGCAAATCGACGACGCAATGCTGCCGAGGTGgaagcaacgacaacaacgccGCCGCCTGCGCTCAGCGAACGATCGCCGACCAAAAAAcgagcggcagcagcagcagctgccacagcGGTGCAATTAACATTGAGTCCCACAGATAAACTCGAGAAGCCcaaggcaacagcagcagcagcacgaaatgccaaaaaacaacagcagcaacaagaaaaacaacagcagcagcaggaaaaacaacagcagcaacaactgcagacGACAACTGCAACTCCCGGCGCTGATTCGGATGCAGAAGGTGCCACCTTTTACATACCACTGATGCAAGGCGTCAGCGGAGGCGCTGGTGGCATACAAGGCGTGGCCGTTAAGTTGGGACGCGAGGGCCCCGACGGGCCCAATCAGAAGGTGGTGATGCAGGCAACACTTGTGACCAAGGCACAAATGGACACCAATTCAAAGCCATTGCCGGATAATGAGCTGGTCAAAACATTACTGAATGCAGCAACAACCGGCAATGATGTTGCAGCAAcggcggcaacagcaacaacagcagcagcaacaacaacaacaacagttgccgGCAGTAGCACCAGCTTAAAGGCTAGCAcctcagcagcagctgctgctgcttctgctacGGCAACGACGACAGCTACAAATCTCGTGCGTGTCAATTCCAATTCATCGCTTTTTTCCGGCTCTGCCAAGTCACGaaccgcagcagcagccgctgcGGCGACGGCAGCAAGCACAGCCTTGGCTAAAAAGTACAAAGATGACACGCCCATTAAGATGGCCAATAACACGGCGTTCCCGCGACACGACGATCCCACGCAAATGGTCGAGGCGCCCATCTTTAAGCCCACCGAGAAGGAATTTGCCGATCCCATAGAGTTTATCGAACGCATCACACCAATTGCAGCTAGATTTGGCATCTGTAAGATTATACCGCCGGCAAGCTTCAAGCCCGAGTGTCGCATCTCGGACGAGATGAGATTCACCGCCTACAATCAGTATGTCCACAAGATGCTGCATCGTTGGGGTCCGAGTGCCAAAGAGTTGAGTGCTATCAAAAAGTATTTGGCCACCCAGAGCATTGTGATGAATCATGCACCATGGATTGGCGGCATGGAGGTGGATCTGCCGCGTCTCTATCACACGGTCCAGGAGCTTGGTGGCCTCAAAGAGGTTATCGAGAAGAAGAAATGGGCACGTGTCGCCGAGGAAATGTGCATACCAAAACTGGCACAAGATCGTGTCACCAAATTGGATGACATCTACTGCAAGTATCTGTTGCCCTATGACACTCTCTCGCCGGCTGAGCGACAGAAGCTCTTCGATGAGGTCGAAGCGGATTGGGCAAAGCGGGAGGCACGTGCTCGTCGCAATGCGGATCGTTTTGTCAATAGCACTGAGAGCGTATCCAATGAGGAGGATGACGTCTCCACGGACGAGGATGAGGAGTCCGAGGAGGAGATCGATGGTGTGTCCATGGAGTGCATTGTCAAGGGTCGCAGCATGCCACTCAGTCAATTCTATCGCATTGCCCGCAACACCATGGCCTTGTGGTTCAAGAGTACCGATCCTACGGTCAATGAAGTCGAGGCGGAATTCTGGCGTCATGTCGCCGTTCGCGATAGTCATGTCTGTGTCCATTCCGGCTCCATTGATAGCTCCGGCTGGGGCTATGGCTTTCCCAGTCCGGGGCCCAAGGGCAAGGGATCCAACTATGCCCGACATCCGTGGAATCTTAAGGTGCTGACCAATAATTCGGGATCTGTGTTGCGCTCCCTGGGACCTGTCATGGGCGTCACGGTGCCTACGCTCCACGTGGGCATGCTCTTCTCCGCCTGCTGTTGGTATCGGGATCCACACGGTTTGTCCTGGATCGAGTATCTGCATACTGGCGCCTCGAAACTCTGGTACGGCATACCCGACGATCAGAGTGCCAATTTCCGTTCGGCGTTAACGTCACTGATTCCAACGCATTGTCAGAACAAGACGATTTGGTTGCCCTGTGATACGGTGATGGTGCCACCACATATGCTCACTGATCGCGGCGTCTCTCTGTGCCGCATCGAGCAGAAGCCTGGCGAGTTCATTGTCGTCTTTCCCCGTGCCTACACCTCCAGCCTGGCCACCGGATATGTCGTCTCGGAGAGTGTCTACTTTGCCACCATGTCGTGGCTGGATTTGGCCAAGGATGACTTTAGGGACATTCACGAGAGCTGTGAACCGGCCATGTTCTCGTTGGAGCAGCTGCTCTTTGCCTTGGGCTACGATCAGCGCGTCAACTCAGACACATTGCAGCAGATGCTGCCCATGCTGAACGAGGTCTGCGAGAAGGAATCAGCAGCACGTGAGCAACTCAGGgCTGCTGGAGTGACATCCACCGAGAAGGTGCAGGCAGAGAAGGGACAAAAGGCgaagaagcaacagcagccaccgCACAAATCCATCGAGAGCGAATGCGATCTGTGTCGTGCCAATTTGTACATATCGATGGTGCGCACCGAAGATGGCAATGTTTATTGTCTGCAGCATGCGCTTAAAAATCTCAACAATGGCAATATACAAGCCAAACAATGTAAACTGATTTATGCCTACAACGTGGACGATATTCAGCAACTGATACGTCAGCTGCAGGAGAAGATTCAACACAAGGCGGCGGTTAAGAAAAAGTAG
- Protein Sequence
- MVVSKDNKRRRKETETPPTSSSAAAAVALAVESSPEMPKRTKVQAQRKFAQGQNAPSSAGAYSAASVAAAAAAAAAASGPSTSGDSLQPPIEILPNKCPKPQDFLTFLCFRGTPALPAHLDYLNQGKSKTNEVPPKSSSINDNNNKKKNNSNNSKKKRGRPAKTTTGKKSSDEHQQQQQLPADQTDKAASDKIEATTSPPPPHPLVGAVRKRAEVITEGNRRGARRTETLKRRSNRANNKDKDDDHEQQLQQQNNEDDAEEEDDEDEFFSAHDASSRNGGADETLSKSEITSSNVKRGRNQAALTRKAAAASPAATESSVTKDKEKAPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVMPKQPEPEEQEKQVKEEKELKEELQEEKQPPKKATDSGTAGNKQQQLNKEKTNSSIYAKDAAKQQQQQLENGGTASAIAAEQQKGLNVFDFSSDDEQPLAKSIKLKKGAKKGATTAAAATVSARGRKSAGGAAKKQQEQREEEKVETTASKTEEQPKTKRGKALKKKADEEHLEKDLEQQQEKKELEEEEEQLSPPQSKKQSNSQHNARPVRRQAQVKATKAQAERSVSPSPQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKEMEKMEKEIKKNAAGKTSEVATRKKSPSNKTAAAATETVAAAPVAVVEQVQPETTVATTTAPRRGRPPKQAKAAATTSAATTSGAAATGKPQIEGMLVKKGALALAKAKSEQQQQQHQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAAATTTAGAAAATPAKASNSSSKLETTPTTAATVAATTAAAAAPTTTAATTAAVAATTTLATTTLNCTPPKQQSQAQQQPLQLPQQQQQQPSLASQLGMSVSATPTTQLTMLPLTAKPTQFSISPPSYAPLKTMEKKSPVPTSKILNVPATYALPGTGAGLGAVGFAKTTSYLPQASPHYHTPYVRPATFVAAAASAVGNKTPQQQMTATLATTTTVTSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYDRSSVLPRANNSSSSNSNNTSNINNFTSPTVARATLSSLSSPVGVAATVKSVLPPPVVSQGQSLNLSLPAVASTSAAAAAAVQQQQQQQQHHHQQQQQQQQQQQQQLLAQNSNNNAAATVSATATDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLTSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDEFDESMRPQQAQTPPGPGATRDDKESTSFSSSSNKTRGELGKSESAWSAKGPSLKATPVLVSTAAAATAAAESDALDFDKCVTAVNLTQKSQLDSDKKLPDKKVKNTASNSVKATVASATTTTTAATTAGSKRSAAATPTASPTPPIKQKAGNKKNATSATAAAATTTTTAATTTPTKRTPVYQNQSNKSKAQLQLDNKQQQQQQQQLLQRQQQTAKTTKSIYVFGKDEETTTTATVAASKAANRRRNAAEVEATTTTPPPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKATAAAARNAKKQQQQQEKQQQQQEKQQQQQLQTTTATPGADSDAEGATFYIPLMQGVSGGAGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDNELVKTLLNAATTGNDVAATAATATTAAATTTTTVAGSSTSLKASTSAAAAAASATATTTATNLVRVNSNSSLFSGSAKSRTAAAAAAATAASTALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSTDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPHKSIESECDLCRANLYISMVRTEDGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIQHKAAVKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568757;
- 90% Identity
- -
- 80% Identity
- -