Dlim022948.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- grh
- Assembly
- GCA_963924055.1
- Location
- OZ001355.1:6786879-6820423[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 1.6e+03 -1.2 3.4 77 111 188 223 140 262 0.56 2 2 2.6e-63 3.6e-59 200.4 0.6 24 221 613 805 599 807 0.93
Sequence Information
- Coding Sequence
- ATGCAGGATGCAACGAGCAGTTATGCGATATCCTATACAGACTGGATAACTGAGTCACGACGCAGCTCCAACAGCTACAACCTGGAAGCAGCGCAGTCAACGTCGACGCCGCAGCAACTTCTTCATCAGCGTCATCTTGATCAtgaagagcagcagcagcagcagcagcatcatcatcatcattactATGAGCCAGCCAAGGACGaggagttgcagttgcagcaccTGCCACTGACTGCCGCAGGCCAACTCATGCCACCTCATGTGGCCAGCGAGTTGCAACAGCTTCCACATCCACATACGCctccaactgcaactgcaactgcaactgttgccCCAACAGATGCCAACGATTCTATTGACGCCTCCGgttccgtctccgtctccgccGCCTCCTATGCTGTCTATGACTATTACCGGAATGAGCAGGATCCACAGCAGTGGAGcaATGCGAACAGCGCCGGCAAACTAAATGGACAGACCACACCTATCGATGTCTCTGGCCTATCgcaaaatgaaattcaagGCTTTCTGCTTGGCTCACACCCCTCATCGTCGTCGGCCACAACCGGCGTTGtgtccacaacaacaatttcgaatcagcagcagcagcagcatcagcagcagcagcagcaacaacaacagcagcagcaacaacagcatcaacaacaacaacaacaacaacaacaggggCAACATCCCAGCGACATTGTAACCATAACCACTTCGGGTGTGGGGGGCTCAATTGTCTCCGCTGCcgtgcagcaacaacaacagcagcaacagttgctgagCATCAAACGAGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCACTGCTAACGGTGGCGGTTCGGTGATAACGCAGAAGATATGTCGCGTGGATGCCAGCGGAAGTGAGGCACAAATTAGCGATAgtacagctgcaacaacaacaacagcaacagcaactgtaacagaagcagcagctgcaactgcaactagTCCCGCCAGTTCCACAGCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCCGAGCAGCACTGGcccaacacaacaacagcaacagcaacagagctCGCTGCAAGCGCAGAGTCCCAGTCCGGGTCCGTATATCACAGCCGATGGCTATGGCATGTATACGACCGCCCGACTGCCGCCCGGTCCCCCGCCCACAACGACCTTCATAACGGAACCGTATTATCGGGAATACTTTGCACCCGATGGCCAAGGCGGCTACGTTCCCGCCGGTACCGCTCGCAGTCTCTACGGCGAGGATGTTTCCGTCTCGGCGGCGACTCAGGCGCAGCCCGTGGGCGGTGTTTATGAGGCACGTTTTACGAGTAATGCGCCAACGACAACCACAGTGCTAACCAGCAGTAATGCACACCATCAcagtcaacaacagcagcagcagcaacaacaacagcagcaacaggaacaATCGGTCAAAAATGGCGGTACACCTTTATATGCCAAGGCCATAACGGCAGCTGGTCTCACTGTGGATCTGCCGAGTCCCGATTCGGGCATTGGCACGGATGCCATCACGCCGCGGGATCAGAATCACATACAGCAGTCCTTTGACTACACGGAACTTTGCCAGCCGGGCACATTGATCGATGCTAATGGCAGCAGCATACCCGTCTCGGTGAACAGCATCCAACAGCGCACTGTGGTGCACGGCAGCCAGAATAGTCCAACCACATCACTGGTGGATACCAGCACAAATGGTTCAACGCGCTCGAGGCCCTGGCACGATTTTGGCCGTCAAAACGATGCTGATAAAATCCAAATACCAAAAATCTTCACAAATGTGGGCTTTCGATATAATCTGGAGAGTCCGATTAGCTCGTCCCAGCGTCGTGAGGACGATCGCATCACCTACATCAATAAGGGGCAGTTTTATGGCATCACCTTGGAGTATGTGCACGATGCGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGCCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGACACTAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTATTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCCGTACAGTGCCTCAGCACGGATTTCAGCAGCCAAAAAGGTGTCAAGGGTCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCGCGAGATGCGACGGTCTTCCACCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCGGAGCGCAAGACGCGGGACGAGGAGCGACGTGCGGCAAAGCGCAAGATGACAGCAACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTGACGGATCGCTCCGAGTTCTATGGCATGCAGGATTTGGCCAAGCCGCCGGTGCTGTTCTCGCCCGCCGAGGATATTGAGaagAGCTTCTATGGCCACGAGACTGACTCGCCGGAACTGAAGGGCGCCTCACCCTTCTTGTTGCACGGCCAGAAggttgccacgcccacgctcAAGTTTCACAATCACTTTCCGCCCGACATGCAGACTGACAAGAAGGATCACATATTGGATCAGAGTATGTTAACCAGCACGCCCATGTCCGACTTTGGGCCACCGATGAAGCGTGGCAGGATGACGCCACCGACCACGGAGCGTGTCATGTTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCCCTCCATGTGGTGCCGCCCACCACAATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatctCAACAACGAgcataaataacatttatcGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTTTACTGCAACGAGGACATTTTCTTGCTGGAGGTGCAACAAATCGAGGATGATCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAATAG
- Protein Sequence
- MQDATSSYAISYTDWITESRRSSNSYNLEAAQSTSTPQQLLHQRHLDHEEQQQQQQHHHHHYYEPAKDEELQLQHLPLTAAGQLMPPHVASELQQLPHPHTPPTATATATVAPTDANDSIDASGSVSVSAASYAVYDYYRNEQDPQQWSNANSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISNQQQQQHQQQQQQQQQQQQQQHQQQQQQQQQGQHPSDIVTITTSGVGGSIVSAAVQQQQQQQQLLSIKREPEDLSKDPKNGTANGGGSVITQKICRVDASGSEAQISDSTAATTTTATATVTEAAAATATSPASSTADLEMYATTGGTQIYLQTSHPSSTGPTQQQQQQQSSLQAQSPSPGPYITADGYGMYTTARLPPGPPPTTTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAATQAQPVGGVYEARFTSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQEQSVKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDIEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476386;
- 90% Identity
- iTF_00601524;
- 80% Identity
- -