Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_008042735.1
Location
VNKB01005464.1:40577-53925[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-09 6.1e-06 25.9 0.0 1 37 367 404 367 409 0.89
2 2 7.5e-19 1.8e-15 56.4 0.0 1 43 797 840 797 842 0.95

Sequence Information

Coding Sequence
atgcaatttttacACTGCGAAAAGTTTGAACATGCCGCTCCACTTTTGCGCCGGAATGAGCAGCTGCAGTGCGTCTGcctctccagctcctgctcctcgtaTTGCACCTgtgcctgctcctgctcctgctcccgttCCTGCTGCTCCACTTCAGCCCCAAGCTTAGAACGCGTTGCTGAGGAATTTATGGGTCGCAGGCAATGGAAACACTACCAAGAGCAACTGACGCGCAGCCACTTGAATATCGAGGAGCAACAGCCCATAGCAATAGTTTCCGGTTCCGAGGACGAGCCACCGCAATACAACCACAGCAGCAAGGATCACTTTAAGACAGAAAACCACCACCGTTTAGAGCAGTATCATAGCCAGCTGGAGGAAGATTTTGAAAACAACCAAACATCACACGATTCATCACGTACTCCGACACCTGGTTCCACAGTGACAGCCACCAGTACACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGCCAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAATGCCCAAGGCGATTTGGTGGCcgaaacagcagcaacagtagcTAACATAAATAGCTATAATAGTAATAGCCACATTCATCAGCTCGACAGTGACAGCAACTCGAGCGCATCACTGCCccaccaaaacaacaacaacagcagtagcAACTGCAGCAAGGCACACAAcattgctgctgcaactgcaactgcatcagcagcaacacccGCTAATTCCCTGGAACTGTACAAGCTGCTGACCCAGCGGGCAGCCAAGATGACATCGATGGACTCAATGGCCGCACAGCTGGCGCAGTTCTCGCTGCTCGCGGACTTTAACTTGATCAActcgctgcagcagcatcagcagcagcaacagcaacagatcGCTAGTTCGGTAACGCCAACTACCTCAGAAGTATCTGCAGCCGCAATCAGTCCCGCACTCAAAGATACAAGCAGTCCCAGTGCCGATGCACCGCTCGATCTTAGCAGCAAACCCTCGCCGAACTCATCGATTAGCGGCGATGTCAAGTCCAGCAGAGCCTGTGCCACGCCAACGCCCACGGGAAGGCGGTCGTACAGCGAGGAGGACCTGAACCGGGCCCTGCAGGATGTGGTGGCCAACAAGCTGGGCACCCGCAAGGCGGCCAGCCAGCATCATGTGCCCCGCTCTATTCTGGTCAATCGGTTGTACAagatacagcagcagcaggacagcGACCAGGAGCAGCCAGATCAACAGGAGCCAGATCCCGAAGACTCCAACGATGATGGCGAAGGCGAAGTGGACAGCAATGCGTCCACTCCGGCGCCGGGTTATCCCGCTGATTTCGCCCTCCGAAAGCTGAGTCACCTGTCGTCCGAGCACAATGGCAGTGATCTGGGCGATGATCTTGATCGGGGAGGATCTCCAAAGCTCGGCCGGCTTCCGGGTGGCGGAGGTGCAAATGTCAGTGTTAATACCGATGGCTTGCCCTCCATACCGCTGGATGCCAAGGTCCTGATGCATACCCTCATGCTGGCCGCTGGCATCGGGGCGATGCCCAAGCTGGACGAATCGCAGACTGTTGGTGACTTCTTCAAAGGTCTGCTTGGTCGAGGGATGTTGACCGAGCCACTGCTCAGTCTGCTGTTGGCCAGTCAAGAGAGCAACGGTAGTGCCTCGTTGctgcttcagcagcagcagcagcagcaacagcagcaacacgtGGCCGCCGCCTTTCGCCATCGCCTGCCCAAATCGGAAACACCGGAGACGAACTCCTCGCTGGATCCGAACGAGGCAGGCGAGGATCCCATATTGAAGATTCCGTCCTTCAAGGTCAGCGGcccggccagcagcagcagcctctcCCCGGGCCTGGGTCACCATTCGCtgaacaataataacaacaataacagcaactgcagcagcaacaggaatGGCAGCAACCGCAGTCCCCACTCCGCCTCACCCTTGCTGGCCGCGGCAGTAGCCCAGAGTGGTTACTCCGCCGGGAACAGTTTGCTGCCCTCATCCTCGTCCAGCATACAGAAGATGATGGCCAGCAATATCCAGCGACAGATCAACGAGCAGAGTGGTCAAGAGGTTCTAAGGAATGGCAATGCCAGcgattgcagcagcaacaacggtggcggcggtggctctTCCTCTTCGATGGGCTACAAGAAGCCGAGCATATCGGTGGCAAAGATCATTGGCGGCACGGATACCTCGCGATTCGGGGCCTCTCCCAATCTCCTGtcgcagcagcaccatcaccCCGGTCATTCCGGCCACCTGAGTcacctccagcagcagcagcagctaagtGCCCAGGATGCGGCGGGCAAGGGCACGCGGCCCAAGAGGGGTAAATATAGGAACTACGATCGCGACAGTTTGGTGGAGGCAGTGAAGGCGGTCCAACGAGGTGAAATGTCGGTCCATCGAGCCGGTAGCTACTATGGCGTGCCCCACTCCACGCTGGAGTACAAGGTCAAGGAGCGTCATCTGATGCGGCCGCGCAAGCGGGAGCCCAAGCCGCAGCCGGATTTGGTTGGCCTGACGGGACCCGCCAACAAAATTCATCTGGACAAGTTGAAGCCGGGCAACCACAGCTCCAAGCTGAGCAATGCCCTCAAGAACAACAGCCAGGCGGCAGCGactgcggcggcggctgcggcggcagctgctgcggcagcCACGCCCAACGGCCTGAAACTCCCCCTCTTCGAGGGTACTCCTCACCAGCTTCCGTTCCAGTCGAACATGTTCTGGCCCCAGCCGAATGCCACGAATGCCTATGGCCTGGACTGGAGACAGCAACCACCACAGGGAGCCGGGGGAAATCACCATGGGCTGATGAAGAGCGCCCTGGAAATGGCGGAGAATATGTACGATGGCATCATCCGCAAGACGCTGCAGTCCAGCGAATCGTCCTCATCGGGCAATGGCAGTGCTGCCGGAAACGGAAGtagcaatggcaatggccacGGACATGCCCTGCTCGATCAACTGCTGGTGAAGAAGACGCCGCTCCCGTTCACGAATCAAAGGAGCAACGACTATGCCGCCACCTGTTCCAGTGCCAGTGGGGAGAGCGTCAAGAGATCGGGCAGTCCGCTGGGCAACTATGCGGACATCAAGCGGGAGCGTCTGAGCGCCGATAGTGCCGGCAGCAGCGACGAGGAGCACTCCAGTAGACATACACCggccaacaataacaacagcgaTCTGGCGCACAACAAGAACAAAGGCAGcgcctcctcatcctccttcGGGGCCAGCGGCAATGGTCAGGCCAATGTGACTGCCAATGGCAATGGACGGAGCAGCCGGATGACGTCGCGCGACTCGGAGACGGATGCCAGTAGCCTGAAGAGCGCGGAGAgcggccaccaccaccaaaaccacaaaacaacaacaatggatCTCAATGGCAGTCACATCAAGTGCGAGTCCGAGGCGGATATGGCCCCATCGGGCAGTCCCATACTGCACGAGAAGCTGGCGCAGATCAAGGCCGAGCatgtggagcagcagcagttatAG
Protein Sequence
MQFLHCEKFEHAAPLLRRNEQLQCVCLSSSCSSYCTCACSCSCSRSCCSTSAPSLERVAEEFMGRRQWKHYQEQLTRSHLNIEEQQPIAIVSGSEDEPPQYNHSSKDHFKTENHHRLEQYHSQLEEDFENNQTSHDSSRTPTPGSTVTATSTPSPPPEPNDWRPSAKCNFCVNGRLLTVNAQGDLVAETAATVANINSYNSNSHIHQLDSDSNSSASLPHQNNNNSSSNCSKAHNIAAATATASAATPANSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLADFNLINSLQQHQQQQQQQIASSVTPTTSEVSAAAISPALKDTSSPSADAPLDLSSKPSPNSSISGDVKSSRACATPTPTGRRSYSEEDLNRALQDVVANKLGTRKAASQHHVPRSILVNRLYKIQQQQDSDQEQPDQQEPDPEDSNDDGEGEVDSNASTPAPGYPADFALRKLSHLSSEHNGSDLGDDLDRGGSPKLGRLPGGGGANVSVNTDGLPSIPLDAKVLMHTLMLAAGIGAMPKLDESQTVGDFFKGLLGRGMLTEPLLSLLLASQESNGSASLLLQQQQQQQQQQHVAAAFRHRLPKSETPETNSSLDPNEAGEDPILKIPSFKVSGPASSSSLSPGLGHHSLNNNNNNNSNCSSNRNGSNRSPHSASPLLAAAVAQSGYSAGNSLLPSSSSSIQKMMASNIQRQINEQSGQEVLRNGNASDCSSNNGGGGGSSSSMGYKKPSISVAKIIGGTDTSRFGASPNLLSQQHHHPGHSGHLSHLQQQQQLSAQDAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKIHLDKLKPGNHSSKLSNALKNNSQAAATAAAAAAAAAAAATPNGLKLPLFEGTPHQLPFQSNMFWPQPNATNAYGLDWRQQPPQGAGGNHHGLMKSALEMAENMYDGIIRKTLQSSESSSSGNGSAAGNGSSNGNGHGHALLDQLLVKKTPLPFTNQRSNDYAATCSSASGESVKRSGSPLGNYADIKRERLSADSAGSSDEEHSSRHTPANNNNSDLAHNKNKGSASSSSFGASGNGQANVTANGNGRSSRMTSRDSETDASSLKSAESGHHHQNHKTTTMDLNGSHIKCESEADMAPSGSPILHEKLAQIKAEHVEQQQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482902;
90% Identity
iTF_00612733;
80% Identity
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