Dleo018065.1
Basic Information
- Insect
- Drosophila leonis
- Gene Symbol
- -
- Assembly
- GCA_035045365.1
- Location
- JAWNPC010000953.1:9538771-9540168[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.075 1.4e+02 2.8 0.2 6 23 22 37 21 40 0.86 2 9 1.8e-07 0.00035 20.7 1.5 15 44 177 203 171 203 0.89 3 9 2.8e-06 0.0052 17.0 1.7 12 43 232 260 228 261 0.89 4 9 1.6 3.1e+03 -1.5 0.1 18 28 269 279 265 291 0.82 5 9 0.65 1.2e+03 -0.2 1.1 16 36 293 310 285 316 0.76 6 9 7.5 1.4e+04 -3.6 4.4 12 41 347 373 337 374 0.69 7 9 0.059 1.1e+02 3.1 0.1 19 39 382 399 380 409 0.82 8 9 0.0054 10 6.4 0.5 18 38 409 426 403 426 0.84 9 9 0.0049 9.2 6.6 1.0 14 40 433 456 423 459 0.70
Sequence Information
- Coding Sequence
- atgctgAAGGCACTCAAGCCGGACACATTTGCCGGGATTGCCAATGCCAAGTGCGGAGAGGTATATTTCCAAAGTCTCAACAGCTATCGCATCGACTGCGCCTTCTGCAATATGAAGAGCTTTGTGTTTGCCGACTTTCTGCTGCACATACAGAACGAGCACTTTGAGAATGGCCTGCTCACGGCAGAGGTGCTGCTGCCGAAGGAGGAGGACATGGACAACAGcaccacaacaacacaaacGAATCTGTTTTCCTGGTATGAAGTGACGACCAATGAACACGACTTGGCTGGCAACAGTGGCACTGCGTTTCTGGGCGCAACTAAACAGTTGGTGGACGATGACAATGACGatgaggacgacgacgacgacgacgacgatgaggaCGATGATGATTTGGAGGATCCCGTTGGCATTATGAAATGGGATATGTCCACGGAGCTCCTCTACAATGAGCACATTGGATCGGATGCTGATAACTCAGATGACATAGGTCAGCGACAGGAGGCAGCACCAAAAGCCCCAAAGGAGCAGCTGGTCTGCATGCACTGCAATAAGACGTATCAAAGCAAGAAGTCGCTGCAGCGCCACATGGAGCGACAGCACAAATATGCAGATGCCATCTCAGAAGACGAcctggatgtggatgtggatgtggatgtggactATGAGCCGCCCAAGGTGCATGTGCCCAAGCCATCCACCAAATATAAATGCGAGCACTGTGAGAAGGTCTACCACGGCAAATACACATTGCGGCAGCATGTGAAACGGGATCATGACATCAATCTGAGCGACGCCTTTGTCTGCCTGGAGTGCAATGCGCAGTTGCCGCGCCTACGCCTGCTGGACGAGCATGTGGTCAAGGTGCATGGCGGTGCGCCTTGTGTGGTATGCAATCGCCGCTACAAGACACGCCACGAGCTGAAGCGCCATCAGCTCAAGCATACGAATGAGCGTGATGTGCCCTGCAGCCATCCGGGCTGTGAGAAGCGTTTCTTCACCACGCGGCACATGCGGAACCACAGCAAGGTGCATTCGGAGCAGAAGAACTTTGTGTGCGAAAGCTGTGGCTACAGCTGCCGCAACAAGGAGACGCTGCGCGTCCACTTGCGCAGTCATACGGGCGAGCGTCCGTTTGGCTGCAAGGTGTGCGACAAGCGTTTCCCATCCCACTCGGGTCTGCGCGAGCACATGGCCATGCACTCGACGGAACGGCCGCATGTGTGCAAGGTGTGTGGCGCCACGTTCTCGCGCCAGAAGGGACTCTACCATCACAAGTTCCTGCATGCGGCCACGAAACAATTTGTGTGCAAGCTGTGCGGCAATGAGTATGCACAGGCAGCAGGTCTGGCGGGGCATATGCGGAAGCATCGCAACGACGAGCTCAATGGCTGA
- Protein Sequence
- MLKALKPDTFAGIANAKCGEVYFQSLNSYRIDCAFCNMKSFVFADFLLHIQNEHFENGLLTAEVLLPKEEDMDNSTTTTQTNLFSWYEVTTNEHDLAGNSGTAFLGATKQLVDDDNDDEDDDDDDDDEDDDDLEDPVGIMKWDMSTELLYNEHIGSDADNSDDIGQRQEAAPKAPKEQLVCMHCNKTYQSKKSLQRHMERQHKYADAISEDDLDVDVDVDVDYEPPKVHVPKPSTKYKCEHCEKVYHGKYTLRQHVKRDHDINLSDAFVCLECNAQLPRLRLLDEHVVKVHGGAPCVVCNRRYKTRHELKRHQLKHTNERDVPCSHPGCEKRFFTTRHMRNHSKVHSEQKNFVCESCGYSCRNKETLRVHLRSHTGERPFGCKVCDKRFPSHSGLREHMAMHSTERPHVCKVCGATFSRQKGLYHHKFLHAATKQFVCKLCGNEYAQAAGLAGHMRKHRNDELNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00520112;
- 90% Identity
- iTF_00476812;
- 80% Identity
- iTF_00532580;