Basic Information

Gene Symbol
-
Assembly
GCA_035045365.1
Location
JAWNPC010000896.1:2972728-2973749[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1 2.4e+03 -0.8 0.0 13 52 32 74 23 97 0.69
2 2 7.1e-11 1.6e-07 31.8 0.0 10 89 143 212 139 212 0.81

Sequence Information

Coding Sequence
ATGAACAATCCGCGGGATCATCTGCATTGCAGCAGAAGAGGCTGCAGCTACACAACGAACAGAGCGTACAACTTAGAGCGCCACGAACGGAACCATGATAAGGGCAAGGTGCCAATCTCGCAGTGCCAGCCATGTCCGCACTGCACATACGCCGCTGGATCTCTGCACAATTTAATGCGTCATATAAGTAAAAAGCACACAGGATCTGCTGTCAAGACACAGCAACAGGCTATAACCAGTCAGCAAACAGCCCCAaccccaccaccaccaccaccgccagcTGAGCAACAAAATGAGCTGCCTGCTGCACAGAAGTCGATGACAGACGTAGAACCAAGTCCCGAGCCGAAACAGACTGGGCAACAGTCGGTGGATCAACTTGCGGATGCGTCACTGTGGCTGTGGACTACGCCGCAACAACAGgaacaaaatttcataaagCGTAGTGGCCTCAAAGGCGAATGCCAAATATTAGAGCGCAGCGTCAATCTGTTCAAatTGTACGCGTTGGTACAAGCGCGTGGGGGAGCTCTTGATGTTGACGAATGGGATGATGTTGCAGCAGCACTGAGTCTGCCTCCGGGATCAGGCTGTAATGTTGGTGTCAAGTATATGGAGGTGTTATTCGAATTTGAGAAGAAAGAGGAAGACCGCTTGCAAGAATGCCAAATTGTCCCAGGTGTTCCGCCTTGGTGGGACGACGGCGATTTGATCAGCGACGATGGGTATTGTGTATCGGAGGGCAAAGTATTATGCCATTGGTGGAGAGATATGAATCGACCTTTTTTAACTGTACAAAATGCtgttattaaattgatttacgATAAGTATTATAGTGATCAtttaagcaacagcaaaccgTTTCAACAGTTCTGCATAAAAGACTCTTGGCTGCGAGCCACAATGTTGAATTATCAAGAGCTAAAGTATCAACTACATTTCAGACATAGTTCTGCCTCCTGA
Protein Sequence
MNNPRDHLHCSRRGCSYTTNRAYNLERHERNHDKGKVPISQCQPCPHCTYAAGSLHNLMRHISKKHTGSAVKTQQQAITSQQTAPTPPPPPPPAEQQNELPAAQKSMTDVEPSPEPKQTGQQSVDQLADASLWLWTTPQQQEQNFIKRSGLKGECQILERSVNLFKLYALVQARGGALDVDEWDDVAAALSLPPGSGCNVGVKYMEVLFEFEKKEEDRLQECQIVPGVPPWWDDGDLISDDGYCVSEGKVLCHWWRDMNRPFLTVQNAVIKLIYDKYYSDHLSNSKPFQQFCIKDSWLRATMLNYQELKYQLHFRHSSAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00544255;
90% Identity
-
80% Identity
-