Basic Information

Gene Symbol
grh
Assembly
GCA_035045365.1
Location
JAWNPC010000110.1:13574401-13608470[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.19 1.3e+03 -1.4 5.4 80 112 265 297 220 346 0.56
2 3 0.61 4.2e+03 -3.0 3.3 111 127 582 598 552 616 0.50
3 3 4.3e-63 2.9e-59 200.2 0.5 24 221 725 917 711 919 0.94

Sequence Information

Coding Sequence
ATGCAggatgccagcagcagcagcagctatgccATCTCCTATACAGACTGGATAGCCGAGACACGCTGGGCGCCGCTTTGCATCAACTCCAATCAGCCGCAACGCAGACGCAAAACATTTCTCACACTCAGGCCATGGTCAGGCGCAAAGGATGCGCGCTCGGGCATTGTGGACAAATTAATGGACTCGGGGCTCGCCACGGTTATCCTTTTGGCTGTACATACACAAATGCGCAGCGAACAGGGGACAACGGGACGCAGCAGCTACAGCCTAGACGcacagcatcatcagcagcagcagcaactccatcatcaacagcatctgcagcagcaacagcagcatttgcCCCAGCATCTACCTCAGCATCATTATGGCAGCCAATCGCCATCGCGTTACTATGAGCCGCCCaagcaggagcaacagcagctgcaacaccTGCCGCTCACTGCCGCTGGGCTAATGCAATCGGTGGCAGATGAGATACAATTGAGCGAACAGCAAGCCACACCACCGCCCCCAGCAACTGCCAGCGATGCAGCAGCGCCCTCCGCCTCCTCCTCCGCCTCCTATGCTGTCTACAGCTACTACAGAGATGTCGAtgctgagcagcagcacaacaacagatcacaacaagaacaacaacagcaacttgtGTGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGTCCGCCACAACCGGCGTTGTCTCCACAACAACAATctcgcatcagcagcaacaacaacaacagcagcagcaacagcaacagcagcaacaacagcagcagcaacaacagcaacaacaacaacaacaacagcaacagcagcagcatcaacagcagccaacACATCCCAGCGACATTGTGACCATAACCACGGCAGGAGTGGGGAGCGCGGGCTCGATCGTCTCCGCTgcagtgcaacagcagcagcagcagcaacagcagcagcagcagctgctgagcaTCAAACGTGAGCCCGAAGACTTGAGCAAGGATCCAGCCAAGAATGGCAGCCTGGGCGCCTCAGCGAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAAGTGAAGCAACTgaggcaactgcaactgcaactgcaactgcattcGATATAGCCAATagaacggcaacagcaacagccacagcagcagcaacagcaacaacaacagcaacaactgcaactgcaactgcaactagtCCCGCCAGAGCGACAGCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCAATGGAACCAGCACACAGCAGAGCACATTGCAAGCCCAGAGTCCCAGTCCGGGACCATATATCACAACGGATAGCTATGGCATGTACACGACGACACGATTGCCACCTGGACCGCCACCTGCCACCACATTCATAACGGAGCCCTATTATCGTGAATATTTCGCACCCGATGGCCAAGGCGGCTACGTGCCAGCGGGCACAGCGCGCAGCCTGTACGGCGAAGATGTTTCCGTAACGGCGTccgcacagccacagccagtgGGCGGTGTCTATGAGGCGCGCTTTAGCAGCAATGcgcccaccaccaccacagtGCTTACCAGCAGCAATGCACACCACCAcagtcagcaacaacaacaacagcagcagcagcagcaacagcaacagcagcaacaacagcagcaacagcaacagcagcagcagcaacaggagcagtCGGTCAAGAACGGTGGCACGCCGCTCTATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTGGACTTGCCCAGTCCTGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTATACGGAACTGTGTCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTTTCAGTGAATAGCATACAACAGCGCACCGTGGTCCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACGAGCACAAATGGTTCGACACGTTCGAGGCCTTGGCATGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAGGATGAGATAAAGGCCTGGCAATTCTGGCATAGTCGCCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAGAAAGGTGTTAAGGGCCTGCCACTGCACGTACAAATCGATACGTTCGAGGATCCACGCGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGATGAGGAACGCCGCGCGGCCAAGCGCAAAATGACAGCAACAGGACGCAAGAAGCTGGACGAGCTCTACCATCCGGTTACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCTCCAGTGCTCTTCTCGCCCGCCGAGGACATGGAAAAGAGCTTCTATGGCCATGAGACTGACTCGCCGGAATTGAAGGGCGCCTCGCCTTTTCTGTTGCACGGCCAGAAggtggccacgcccacgctcAAATTTCATAATCATTTTCCGCCCGACATGCAGACtgaTAAAAAGGATCATATATTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCACCCATGAAACGGGGTCGCATGACGCCGCCAACCACGGAGCGTGTCATGCTGTATGTGCGGCAGGAGAACGAGGAGGTCTATACGCCGTTGCATGTGGTGCCGCCCACGACGATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGagcataaataacatatatcgCACAAATAAGAAAGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATCTTTTTGCTGGAAGTGCAACAGATCGAGGATGATCTGTACGATGTGACGCTCACAGAGCTGCCCAATCAGTAG
Protein Sequence
MQDASSSSSYAISYTDWIAETRWAPLCINSNQPQRRRKTFLTLRPWSGAKDARSGIVDKLMDSGLATVILLAVHTQMRSEQGTTGRSSYSLDAQHHQQQQQLHHQQHLQQQQQHLPQHLPQHHYGSQSPSRYYEPPKQEQQQLQHLPLTAAGLMQSVADEIQLSEQQATPPPPATASDAAAPSASSSASYAVYSYYRDVDAEQQHNNRSQQEQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQPTHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQLLSIKREPEDLSKDPAKNGSLGASANGSVITQKILRVDAARSEATEATATATATAFDIANRTATATATAAATATTTATTATATATSPARATADLEMYATTGGTQIYLQTSHQNSNGTSTQQSTLQAQSPSPGPYITTDSYGMYTTTRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVTASAQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQSVKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00546416;
80% Identity
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