Dlat015694.1
Basic Information
- Insect
- Drosophila lacteicornis
- Gene Symbol
- srp
- Assembly
- GCA_008044355.1
- Location
- VNKF01010784.1:33699-39658[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-19 1.4e-15 56.6 1.9 1 35 198 231 198 232 0.97 2 2 2.3 8.8e+03 -3.5 0.1 9 22 425 438 421 438 0.77
Sequence Information
- Coding Sequence
- ATGCAAACGCGCGTGCCCCGATTCGGTTGTGGTTTCTTCTCCGCTCCCAACTCCGTCTTCGTCTCCGAATCAGACTCCGTCTCCAGCTCGGTCTTCCGTCATCCGCCACCCAGCCTCAACGAGAGCTGGTTCGAGCCCCTCAGCTATACGCAGGCAGCTGGACAGGCGCAGCTGGGCGTTGGAGCCGGTGTGGTCACCAATGTGATACGGAACGGAAGAGCGATCTCGGCGGCCaatgcagcagccgcagcggcCGTGGACGGGAGCACGGGTCGCGTCGATCCGGGCTCCTTCCTCTCCGCCTCGGCATCGCTGTCAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACTACTCATTTAATGTGGCCgctggcggtggcggaggcCGTAGTAAGGCCAGCACGAGCGCCGCCAGCTCGCAGGCCTCCGGCTCCTGTCCAGCCTCGGGTGCGACCTCggcatcggcggcggcggcggccgcgtcgggaacgggaacgggagcgACTGCAGCCACGACGCTCGACGAGCATGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCACTAAGCGAGCCGGTCTTTCCTGCTCCAACTGCCTCACCACCTACACTTCACTTTGGCGACGCAATCCCGCCGGGGAGCCCGTGTGCAATGCCTGCGGCCTGTACTTTAAGCTGCACAGCGTGGCCCGACCTCTGACCATGAAGAAGGACACCATACAGAAACGCAAGCGCAAGCCAAAGGGCACCAAGGGCGaaaagtccaagtccaagatGAAGAGCGCCCTGAACTCCACGCTGGAGAGCGGCTCCTTGACGGCCAATTGCCACAATGTGGGCCTGGGCATGGACAGCAACCAGATGGACGTGAATGATGATATGAAAGCACAGATAGAAATGAAACCATACATGCCATACtcatcgcagcagcagcagcaacatcagcagcagcagcagcaacagcagcagcagcagcagctgctcgctGACCAGCACTCATCGGCGGCCAGCTCGCCCCATAGCATGGCATCCTCCTCATTATCGCCCTCAGCCACATCACATCAGACGCATTCgctccagcaccagcagcagcagcagcagcagctctgcTCCGGGCTGGACATGTCGCCCAATTCGTCCTACCAAATGTCACCCATCaacatgcagcagcagcagcagcagcatcatcatcagcagcagcagcaagcctGCAGCATGCAGCACTCGCCGGGCACGCCCACTTCCATTTACAACACATCCTCGCCCACACATCACCTtcacaataacaacaacaacaataacacgCTCttcaataacaacaacaaccatagTAGCAATGAGAATAACAACAAACTTATACAGAAATATCTGCAAGCTCAGCAGCTGAGcagcgggaacgggaacCATGTGGCCGCCACCAACTATGCCATGCACgctgcccagcagcagctgcaggagatgGAGCGCAAGTTTGGCGTGGAGCGGGAAACGGTGGTCAAGATGGAGTAG
- Protein Sequence
- MQTRVPRFGCGFFSAPNSVFVSESDSVSSSVFRHPPPSLNESWFEPLSYTQAAGQAQLGVGAGVVTNVIRNGRAISAANAAAAAAVDGSTGRVDPGSFLSASASLSAMAAESGGDFYKNYSFNVAAGGGGGRSKASTSAASSQASGSCPASGATSASAAAAAASGTGTGATAATTLDEHVSRANSRRLSATKRAGLSCSNCLTTYTSLWRRNPAGEPVCNACGLYFKLHSVARPLTMKKDTIQKRKRKPKGTKGEKSKSKMKSALNSTLESGSLTANCHNVGLGMDSNQMDVNDDMKAQIEMKPYMPYSSQQQQQHQQQQQQQQQQQQLLADQHSSAASSPHSMASSSLSPSATSHQTHSLQHQQQQQQQLCSGLDMSPNSSYQMSPINMQQQQQQHHHQQQQQACSMQHSPGTPTSIYNTSSPTHHLHNNNNNNNTLFNNNNNHSSNENNNKLIQKYLQAQQLSSGNGNHVAATNYAMHAAQQQLQEMERKFGVERETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00492622;
- 90% Identity
- -
- 80% Identity
- -