Dlat007315.1
Basic Information
- Insect
- Drosophila lacteicornis
- Gene Symbol
- Hivep2
- Assembly
- GCA_008044355.1
- Location
- VNKF01010536.1:59307-66907[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00023 0.019 15.5 0.2 1 23 231 253 231 253 0.98 2 8 0.00023 0.018 15.5 2.9 1 21 259 279 259 283 0.89 3 8 0.027 2.2 9.0 0.1 1 19 600 618 600 621 0.93 4 8 2e-06 0.00017 21.9 2.0 1 23 1305 1327 1305 1327 0.99 5 8 8.5e-06 0.0007 20.0 5.3 1 23 1333 1357 1333 1357 0.92 6 8 0.0001 0.0083 16.6 2.6 2 23 1825 1846 1825 1846 0.97 7 8 0.00058 0.048 14.2 1.2 1 23 1852 1876 1852 1876 0.91 8 8 0.0019 0.15 12.6 2.7 1 23 1897 1921 1897 1921 0.92
Sequence Information
- Coding Sequence
- ATGACGCTACAACAGATGGCAGCAgtcagcagcggcagcagcggcggcggcagcagtaACAAGGAGCCAGTGGCCATAGCCACAAATAACCACAACATCAACACGCCCGCCACCGATGGACCCGCTCTCGGGGATTGGCCCACCAATATCTCGCGGTATCTTCACAAGAAGTTTAAGCGCCTGGCCAGCACCACCGAGGTGGAGAGCAGCGGGTATGGGTCGATGGCGAATGGTGGCCCCTTAACCTCTGATCCAGGTATGCGCACCACCTCGCTGTCCTCAAACAGCTCACTGTCACCGCCACCGATGGTCACCAATGGTCACCACTTGACCCAGCAGctagtgcagcagcagcaaccgccgactgtcgccgccgccacctcAACCACCACACATGAATTCAGTGCCAATTTTGTAAATAGCAATCATGTCAATGCCATTGGTCATGAGGAGAGCAGTAGCCACAAGGCAGCCGTGAATGCGAGAACGCGAACGCCGTTGagtagcagcaacagcagtagcagcaactATGCGGCGAATGCCACTCTCTCGCCGGCCACATTTGCCCAGCACCAACAGCTGACGCAGCCAACAGCGGGAGGAGCAGGGATAGCAGGCGGAGGCGGGATaccaggcggaggaggaggcggagcagcagcagcagcagcagccgttgAGAAGGCAGGACGCTATGTGTGCCCGTACTGCAATCTGATCTGTGCCAAGCCCTCGGTGCTGGAGAAGCATATACGCGCCCACACCAACGAACGGCCATATCCCTGCGACACCTGCGGCATAGCCTTCAAGACGAAGAGCAACCTGTACAAGCACTGCCGCTCCCGGTCGCATGCGGCCAGGGTGCGGGGCCTGGAAGTGCCAGCCGATGCCGACGATGGGTTGTCCGATCAGGATGCTGAGCTGAGCAACAGTAGCTCGGAATTGCCAAGTCGCGCAGGTTCGCCATACGATGAGCCCATGAGTTCGCCCACACCCTCACCCTCCACGCTGTCGGCGGCCAAGAGCGCCTACatccagcagccgccgccactCCCGCAGCACATGCAACAGCTGCCGCTGGGCTCGCCAGCTGCTGGCACCTTGCCGCCCACAACGGCGGACAATCTCCACTCGGCCACCGCCCAGCATCGTCAGTCGATAGACTACAAGCCATATAAGCCCAACACccagatgaagatgaagaacCACATCAACTCGCACCAGCTAcagatgcagctgcagcatcagCTACATGCCCAGCAAACCCTGTTGGCCGCCATGCCGCCAGTGCCGCCAGCCGGACAGCTGGTGCGAGCCAACAGTCAGGTGTCCAGTGTGACGCCAgcccctgccacgcccacgcccgcTGCAGCCGCCAATCTCAGCAGCTTTGCCAGCTCCAGCGGCAGCATGCAAGTGAATGTGGCCAAGGTGCAGGAGCACATATCCAAGTTGATCTCACAGAACGAGGCTATTGTGGAGAACAAGGAGATATTGCTGCAGAAGAAGTATCCCAAGCAGCTGAATCTGGCCAAAATGGAGCAGCCGGCCGCAACGGGAGGGCATGTGATGCCTTTGAACTTGTCAGCGAAAGCACAGCCAAAGCCCGCTGTGATTACGGTGCCCGTGAGCTCATTGTCCAACAACAGCTCGGTGCCAGCAGCGACGCCCACCAGTTCTGGCAGCAGCACCTCGAAGGCAGCGCCACCGGCTGGACAAATTAACAATTCGATTATCAAGAACCTGTTGCTGAATGCTCGGGGATTGGCGGTGCCAATTGGCGAGGGCGACGATGCCGTCTACTCGTGCCCGATCTGTGCCAGCGAATTCCGCAGTGCGGACGACTTGAAGCTGCACAACAGCACCTACTGCCAGGACGCGAGCTCCAGTGCACCCATGAGCCCCGCCTCGTCGCCCTTCCGCTCCAACTCGATCTCGTTGAGTCTGCCGGAGCTGAAGAGCCACATGGCCAACTCGAAGAACCCACTGTCGCTGGCCAAGCTGGCGTGGTCGCAGCTGAAGACCAAGAGGAGCACCCTGGTGCTGAGCCGGCTGAGTGCGGCTCAGACGCCGGCGAGAACGTCGACGGTCACTGCAAGCACCTCCACTgccccagctcctgctccagcttctgctcctgcgGCACAGCTGCCCCTTGAGAACCTGCGCTTTGTGGATGCCCCACTGCCATCGCCGGGACCGCTGCTAGGAAAGACACCGTTGGTGGACTATGCCCAGCAGAATGCGCCAAGGAAGGCTCAGGATTCAGTGGTCATTACCAAGATGCACGAGGATCGGCAGTTTGCCAGCTTGGACCTGGAGGCTCAGCCCGCCAAAAGGGTGAAGACAAGCGATCTGGCTTCCTCAACCTCCCAGCAAAGCACAGCCTTCTCCTTTCCCTTCACCAACCACAACAGCGTTCCAGAGCCTCACTCCATCAAAGAGGAGCGCCTGCGCAGGTTCACCTCATCGGGTGGCACCATGATTCCCATTTCGGAGTGCCCTGACCTGGACAACAGCCCCAAGATGATACGCACGCCCTTGCTGTCCGGTGGCAGCTTCCAGGATGTTTCGGTCAAGGTTAGCGATGCTGGAGGATCCAGCAAGGAGCGCAAGCTCATGGCTTTGGTGAGTGGCAGTGGACTGCTCGGCGTCAGTTCGGGCCCCCAGCACTTTCAGTTTCCGCCCATCAACTCGATAACGGCCTTCAATCCACTGACCTTGCCGCCAATGAgcgctggaggaggagcaggtgaTAAGTCCACACCCGTCACGCCCATACCCTATGTGCCTGGTATCCCAGGGCCAGGAAGTCTGACGCCTCAGATGCCGCtgttgccaccgccgccacagcagctccagctgcccGTTCCCTCAGGCCGTGGCCGCAGTCCGAATCGCAAGCAACCCAGTCCGCTGTTGGTTGCTGGCGAACTGAAGGCTCTCTCTCCCTTCGGGGGAGTCCAAAATGTGCCCAGCGAGTTCAGCCGTCAGCCACCGACTCCTGCTCAGCGGCAGGCGCTGCAGTGGAACAGCAAGGAGGCGACGACGCCCAAGAAGGCGCCTTTTAACTTCCTCCGAATGGCGGACAATGTCAAGGCCACCACGGAACCGGAAGTGCGACACTTTAATCTGGACAATGTGATTGCGGGGAAACAAAGAGAGCAGGAGTCGCCCCTAACGCCACTCCATGTGGAAACCCCGAATGGCAATGCCACAGAGGAAGCCACTGCCAGCACCTCGGCCAAGTCAAAGTTCCTGCGACCCACCAGCTTGCCCCTGAAACCCGGAACATTTACGCCAAAGCGTCATCATGGCATAACGCCCACGGCCAATACGTTGCCCCTGATCTCCCCGGAGACCCCAAGACCCTCCAAGTCCTGCGTGCAACTCTATCTCAACGGCCATGCCTACACCTACCTGGGTCTCAAGTGCAGCACCAAGATGTTCTACTGTACAGTGAACTGTCCGCAGCCCTCGTATGTGGCCGGTATGCACAAGCTGTCCATGTACAGCGTGTGGCAGGTGTGCGAGGAGAACCAACCGCATCCGCTGGGcttcaagctgaagaaggtGATGTCGCTGTATGACTCGCGGCAAAGGATGCTCGGGAATGGCAGCTCCACCGCCATGGCTGGAGCCGGGAAGTTAAGCTACAATGTGGTCTCCTCGCAGCAGACCGTGTGCTCTACGTCCACCTTGGtgagtgccagtgccagctcCTTCTATCAGAAGACGCCGTCAGCGGCTGTGACTGTGTCCGTGTTGAGCGAGGCCAATGTGGCGGCCAAGgccaacgaggaggaggaggcgcaGGCCAAGAAAATGGAGACCAGTCCCTCCGGGCAGCCATTGGTCGGAGGCTATGAGTCGCACGAGGATTACACTTACATACGCGGCCGGGGACGTGGCCGGTATGTGTGCTCCGAGTGCGGTATACGCTGCAAGAAGCCCTCGATGCTGAAGAAGCACATACGCACCCACACGGATGTGAGGCCCTTCACCTGCAGTCACTGCAACTTCAGCTTCAAAACCAAGGGCAATCTGACCAAGCACATGCAGTCCAAGACGCACTTTAAGAAGTGCATTGAGCTGGGCATTAATCCCGGACCCATGCCAGCCGATGGCGAGTTCTTGGATGTGGACATGGACTTTGATCAGCAGTCCTCGACCTCGGCAGGAGGACGCACCTCCTCCATGGCGGGAGAGTCTGATTCCGATGATTACAGCGACAATGAGTCGGAGAGTAGTGATACCGACGAGTCCAAGTCTCGTTTGAAAGAGCACGAGGCCGCCCGGTGCCTGCTGTCGCTATCGATGACGCCGCCCATTCCACAGAGTGTCTCCCCCTATCCGCAGCACCTGCAGGACACACCTCTGCCCGCCGCCAGTCCCGCCAACAGCATTGGTTCCTCGGGCTCGCTGCCCAAGCGCTTGGTGTGTTCGTTCACCTCGCCCAAGCCACCGTTCGACTATCAGAAGCAGGAACAGTATTACTCCAATCCGGAGGAGTCCAAGCCCAAGCGCAGCGTGGCCAGCGAGGAGAGTGCTCCCATGGATCTGACCAAGCCGCGTGGCTCCATGTCATCCGCTGTCTCGCCAGCGCCTCAGCCCATTCAGGATCTGCCCAAGTCGCAGGCCCAGCAAATGCACGATGTGATCTTCGGGAGCTCCGGGAATGAGAGCGGCTTCATGAAGACCTTGATCTCGGTGTCGGACAAGGTGCGCATCTCGGCCGAAATGGAGGAGCAGGCCAAGCACGAGGCGGCCGAGGGCGAGGATGTCCTGCTGCAGACCTACATTAAGGAGCAGGCCCTGCATCATGCCAAGCGGAAGCAGAGCCAGTTCAGTGGCAGCTACCTGATCAATCCTTCGTTGTTCTCCACGGCCTCCACGGTGATGAGTTGCAGCGTGAGTAGCAGCAGCGGAAGCAGCCTCCTGACCACCACTAGTAGACCCATTATGACCATCAACGAGGTGCCCAGCATCGAAGTGCACGAGGTGAAGACGCCAGAGGCGGTGGAAATGCCACCAATAGCAGCACCTGTGGTGGCtccacccacacccacatcTGCAGCTACACCTACTCCAATTCCGGTAAAAATTGTCCAGGAAGAGAGTGAGGAATCGGACCAGGAGAAGCCTGTAGGAGAGCCACATAATGCCAATCTGCCAGCTGCAGTGCAGCAGCCGGATGCCAATGATTTTAGCGGAGTTCTCGGACATTCACAATCAGGAGgaacagctgctgctcctcctgccgTCACAGTGGCCACCTCAACACCCGCTCCCGTGACCGTAGCCACCTCAAACTCTCAACCCACTCAGCGCACTGTGATTGTGGGCGAGGATGGCTTCAAGAACGCTTCCACGCCCAGCAGCAAGAGCAGTgatctccagcagcagcagcagcacgttTCCTACGGTCGAGCTGGGCCTGTTCCCGCTCCGCTTCCCGCCAGCGATGCCCGTCCCACCTGCTCCATCTGCGCCAAAACCTTCCAGCGCCAGCACCAGCTGACCCTGCACATGAACATCCACTACATGGAGCGCAAGTTCAAGTGCGAGCCCTGCAGCATCTCCTTCCGCACGCAGGGACACCTGCAGAAGCACGAACGCTCCGAGGCGCACAAGAACAAGGTGATGATGACCTCGACCTTTGGCGTGCCCACCACCTCCAATCCGCGGCCCTTCGAGTGTACCGACTGCAAGATCGCCTTCCGCATCCACGGCCATTTGGCCAAGCACCTGCGCTCCAAGACGCATGTCCAGAAGCTGGAGTGCCTGCAGAAGCTGCCCTTTGGCACCTACGCGGAGATCGAACGCGCCGGCATCAGTCTCACCGAGATCGATACGAGTGACTGTGAGAATTCGCTGATTTCCCTCAAGTTGCTGGCCCAAAAGCTGCTTGAGAAGGATCCGAACAAGCTGAGTGGATATACCACACCCTCCGGCATGATGCAGCTGGCCCAGGATCCGGCGAATCCTGCCTCGCAGGACAGTGCCTCCGAAGATGGCTTCAGTGCCGCAGTGGCCATAGCCTCGGCCATTGCCTCGCTGGACAACGACAGTGCTGGGAACACACCGAAGCGGGCCAGCTCCATGTCCGAGGATGAGACGGTGGCCAATGGCCTGAACCACAACCTGAAGCGTCGCTTGCCTGGGAGTTTCAGCAGCACGGGCGAGGAGAGCGATAACCCGGCGGAGGGCGAGAAGCGAGCTCGCTCCAGTCAGGATCTACCAGCGGTAGCGGTGCCCGTtgccgttcccgttcccgttgctgctgctccggcggCCAGCAACTGA
- Protein Sequence
- MTLQQMAAVSSGSSGGGSSNKEPVAIATNNHNINTPATDGPALGDWPTNISRYLHKKFKRLASTTEVESSGYGSMANGGPLTSDPGMRTTSLSSNSSLSPPPMVTNGHHLTQQLVQQQQPPTVAAATSTTTHEFSANFVNSNHVNAIGHEESSSHKAAVNARTRTPLSSSNSSSSNYAANATLSPATFAQHQQLTQPTAGGAGIAGGGGIPGGGGGGAAAAAAAVEKAGRYVCPYCNLICAKPSVLEKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARVRGLEVPADADDGLSDQDAELSNSSSELPSRAGSPYDEPMSSPTPSPSTLSAAKSAYIQQPPPLPQHMQQLPLGSPAAGTLPPTTADNLHSATAQHRQSIDYKPYKPNTQMKMKNHINSHQLQMQLQHQLHAQQTLLAAMPPVPPAGQLVRANSQVSSVTPAPATPTPAAAANLSSFASSSGSMQVNVAKVQEHISKLISQNEAIVENKEILLQKKYPKQLNLAKMEQPAATGGHVMPLNLSAKAQPKPAVITVPVSSLSNNSSVPAATPTSSGSSTSKAAPPAGQINNSIIKNLLLNARGLAVPIGEGDDAVYSCPICASEFRSADDLKLHNSTYCQDASSSAPMSPASSPFRSNSISLSLPELKSHMANSKNPLSLAKLAWSQLKTKRSTLVLSRLSAAQTPARTSTVTASTSTAPAPAPASAPAAQLPLENLRFVDAPLPSPGPLLGKTPLVDYAQQNAPRKAQDSVVITKMHEDRQFASLDLEAQPAKRVKTSDLASSTSQQSTAFSFPFTNHNSVPEPHSIKEERLRRFTSSGGTMIPISECPDLDNSPKMIRTPLLSGGSFQDVSVKVSDAGGSSKERKLMALVSGSGLLGVSSGPQHFQFPPINSITAFNPLTLPPMSAGGGAGDKSTPVTPIPYVPGIPGPGSLTPQMPLLPPPPQQLQLPVPSGRGRSPNRKQPSPLLVAGELKALSPFGGVQNVPSEFSRQPPTPAQRQALQWNSKEATTPKKAPFNFLRMADNVKATTEPEVRHFNLDNVIAGKQREQESPLTPLHVETPNGNATEEATASTSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKLKKVMSLYDSRQRMLGNGSSTAMAGAGKLSYNVVSSQQTVCSTSTLVSASASSFYQKTPSAAVTVSVLSEANVAAKANEEEEAQAKKMETSPSGQPLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDMDFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRLKEHEAARCLLSLSMTPPIPQSVSPYPQHLQDTPLPAASPANSIGSSGSLPKRLVCSFTSPKPPFDYQKQEQYYSNPEESKPKRSVASEESAPMDLTKPRGSMSSAVSPAPQPIQDLPKSQAQQMHDVIFGSSGNESGFMKTLISVSDKVRISAEMEEQAKHEAAEGEDVLLQTYIKEQALHHAKRKQSQFSGSYLINPSLFSTASTVMSCSVSSSSGSSLLTTTSRPIMTINEVPSIEVHEVKTPEAVEMPPIAAPVVAPPTPTSAATPTPIPVKIVQEESEESDQEKPVGEPHNANLPAAVQQPDANDFSGVLGHSQSGGTAAAPPAVTVATSTPAPVTVATSNSQPTQRTVIVGEDGFKNASTPSSKSSDLQQQQQHVSYGRAGPVPAPLPASDARPTCSICAKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMMQLAQDPANPASQDSASEDGFSAAVAIASAIASLDNDSAGNTPKRASSMSEDETVANGLNHNLKRRLPGSFSSTGEESDNPAEGEKRARSSQDLPAVAVPVAVPVPVAAAPAASN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00594759;
- 90% Identity
- iTF_00480368; iTF_00483145;
- 80% Identity
- -