Basic Information

Gene Symbol
-
Assembly
GCA_008044355.1
Location
VNKF01000851.1:1-12419[+]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 5.7e-16 1.3e-12 48.3 3.7 1 86 39 111 39 112 0.85
2 10 2.6e-15 6e-12 46.2 5.0 1 87 139 208 139 208 0.83
3 10 2.3e-16 5.4e-13 49.6 0.2 1 87 230 302 230 302 0.85
4 10 1.6e-16 3.8e-13 50.1 5.3 1 87 400 470 400 470 0.82
5 10 9.6e-16 2.3e-12 47.6 3.6 1 86 494 565 494 566 0.81
6 10 3.4e-13 7.9e-10 39.4 0.4 1 87 601 669 601 669 0.80
7 10 2.1e-11 4.8e-08 33.7 1.5 1 86 711 780 711 781 0.76
8 10 1.3e-17 3e-14 53.6 0.4 1 86 808 877 808 878 0.82
9 10 5e-13 1.2e-09 38.9 1.9 1 85 899 967 899 969 0.79
10 10 1.9e-15 4.5e-12 46.6 0.5 1 86 996 1067 996 1068 0.85

Sequence Information

Coding Sequence
GTTCAGGAGAGCGgctacaataatatttatagtagCAGCGACACCTCAATCCACGGTGCCCTCGCTGGACCGCAGGCACATTCTTCGACACTGGACGACTCCGAGGATGCGCTGTGCTGTGTCCCGCTGTGTGGGGTGCGGAAGAGCACAAGTCCCACATTGCAATTTTTCACGTTCCCAAAGGACGAGAAGTATCTCAACCAGTGGCTGCATAACCTTAAGATGTTTCACATACCCGCTTCGAGCTACCTTAGCTTCCGCATCTGCAGTATGCACTTCCCGAAGCGATGTATTAACCGCTACTCCCTGTGCTACTGGGCGGTGCCAACTTTCAACCTCGGGCACGATGACGTAGCCAATCTCTACCAGAATCGGGAACTTACCAACACCTTTACCACTGGCGAAGTGGCGCGCTGCAGCATGCCACATTGCACTAGCCAGCGAGGGGAGAGCAACCTTAAGTTCTACAACTTCCCGAAGGATATCAAAAGCTTGATAAAGTGGTGCCAAAACGCCCGACTTCCGGTGCAGGCGAAGGAGCCACGACATTTCTGCAGCCGCCACTTCGAGGAGCGATGCATTGGCAAGTTCCGATTAAAGCCGTGGGCAGTGCCGACATTGCACCTTGGCGCCCAGTACGGCAAGATACACGACAATCCAAAAAATCTTTACGTAGAAGAAAAACGTTGTTGCCTAAACTTTTGCCGTCGAAGCCGATCGTCGGATTTCAATATGTCGCTATACCGATTTCCTAGGGATGAAGTCCTTTTGCGTCGCTGGTGCTATAATCTTCGCCTCGATCCGGGAGTGTACCGCGGCAAGAATCACAAAATTTGCAGCGCCCACTTTATCAAGGAGGCACTGGGTCTCCGTAAACTATCTCCTGGTGCCGTGCCCACGCTTCATCTAGGCCACAACGATACCTTCAACATCTACGAAAACGAGCTATGGCCCCCGCCGACACCAACACCCTCAACTTGTcacttgcaacagcaacaacagtcATCACTTCACTCACTGCAACAGCAAATGCACAGCAAGTCCTACCAGCGTCGTTCCGTGGCATCCACTTCGTCGTCGGCGAGTTCGGCAGCTTCGCATTACGTGGACCCGGAGATGAACGCATCTTAccatctagccatgtccgcctcCGCCAGTGGCTCTGCGACGATAAACGCCAGCGATAGCATGGACGTCTGCTGCGTGCCTAGTTGCGAAAGCAAGCGCCACAATAGTGAGAACATCACATTCCACACGATACCGCGACGGCCCGAGCAGATGCGCAAGTGGTGTCACAACCTTAAGATTGCCGAGGACAAGATGCATAAGGGCATGCGAATCTGTAGCCTCCACTTCGAGCCCTACTGCATCGGCGGCTGTATGCGACCCTTTGCGGTTCCCACTCTTCATCTGGGTCACGATGACGAGGACATCCATCGCAATCCGGTCGTGATCAAAAAGCTAAACATTCGGGAGACATGCTGCGTGGCTGTGTGCAAGCGGAATAGGGACAGGGACCATGCCAATCTGCATCGCTTCCCCAGCAACGTGGCCTTACTGAGAAAATGGTGCGCCAATTTGCGGCGCTCTGTCCCCGATGGCAGTAAACTCTTCAATGATGCCATCTGTGAGGTGCACTTTGAGGATCGCTGCCTACGCAACAAGAGGCTGGAGAAGTGGGCAGTGCCTACTCTGGTTCTCGGACACGAAGATGTCGCCTATCCACTCCCCACACCGGAGCAGGTGACCGAGTTCTATGCACGGCCTACAGCTCCCAACAATGGCGAAGAACAGGGCGAGTGTTGTGTGGAGACCTGCAAGAGGAATCCTAGCGTGGACGACATTAAGCTTTACCGCCCGCCAGAGGATGCCGCCGTGCTGGCAAAGTGGGCGCACAATTTGCAGACGGAGGCCAACCAGCTGACGGGCATGAGGATCTGCAACCTGCACTTCGAGGCGCATTGCATTGGCAAGCGGATGCGACTGTGGGCAATACCAACTTTGAATTTAGCTGGCAACATCGAGAATCTCTACGAGAATCCAGAGCAATCGCTGCTGTACAGGCGGCGGACGACTCATTTGAAGACAAAGCTGCCGTCAATCTCCGCAAAGCCCACCTGGGTGCCCAGGTGCTGTCTTCCGCACTGTCGCAAGGTCAGAGCCCTGCACAACGTTCAGCTTTACCGCTTCCCCAAGCTCAATCGCTCCACACTGGCTAAGTGGGCGCATAATCTCCAGGTTCCCATGGTGGGCAGTGCCCAGCGCAGGCTATGCTCGGCTCATTTCGAGCCGCATGTACTTAGCAAAAAGTGCCCGGTCCCGCTGGCCGTACCTACGCTCGACCTAAACTCACCATCCGGCCTGAAGATCTATCAGAATCCGGCCAAGCTAAAGGCCAGCAAACTGTGCCTGCAGCGTGTTTGCATCGTCGAGAGCTGCCGCAAGACGCGGGCGCAGGGCGTGCAACTATTCCGTCTTCCGCACAGTCCCACGCAGCTCAGGAAATGGATGCACAACATAAGGACGCGGCCACGGGCAGCTATGAGGGCTCAATACCGTGTCTGTTCCCGCCACTTTGAGACGCACTCATTCAATGGCCGCAGACTCAGCGCAGGTGCTATTCCGACTTTGGAACTGGGTCACGATGGCGACGACATCTATCCCAATGAAGCCCAGgcatttgtggaagaacactGTGCTGTCGAGGGCTGCGAGGCGTCCAAAGAGCACCCGGAGGTCCGACTCTTCCGCTTCCCCACCGATGACGACGATATGCTATGGAAGTGGTGCAACAACCTCAAAATGAATCCTGTGGACTGCATTGGGGTACGCATCTGCAACAAGCACTTCGAGGCTGACTGTATTGGTCCCAAGCACCTGTACAAGTGGGCCATTCCCACAAAGGAGCTGGGCCACGACGACGCACAGATCGAGCTGATTCCAAATCCAAAACTAGAGGAGAGGTATGTGGATCCAGTCTTTAAGTGCATCGTACCCACCTGTGGAAAGACGCGACGCTTTGATGAGGTGCAGATGAACAGCTTTCCCAAGGATCCGGATCTGTTTCAGCGTTGGCGGCACAACCTGCGCTTGGAACACCTCAGTTTCCAAGAACGTGAGCGCTACAAGATTTGTAACGCTCACTTTGAGGAGATTTGTATTGGGAAGACTCGGCTGAACATTGGATCCGTACCTACCCTGGAGCTGGGTCATGACGATGAAGATGATATTTTCCAAGTGAATCCTGCGGAACTGCAGAGTAACTTATTCGGCCGACAACGTCGACTGCTACTTGAGGAGTCCGGCGATGGGAGTGCGAAACAAGGGCTGTCCGAGACGAAAGATAACAGAAATACGGATCTGACGGCCACAGGCTCCAATTCCAAACAG
Protein Sequence
VQESGYNNIYSSSDTSIHGALAGPQAHSSTLDDSEDALCCVPLCGVRKSTSPTLQFFTFPKDEKYLNQWLHNLKMFHIPASSYLSFRICSMHFPKRCINRYSLCYWAVPTFNLGHDDVANLYQNRELTNTFTTGEVARCSMPHCTSQRGESNLKFYNFPKDIKSLIKWCQNARLPVQAKEPRHFCSRHFEERCIGKFRLKPWAVPTLHLGAQYGKIHDNPKNLYVEEKRCCLNFCRRSRSSDFNMSLYRFPRDEVLLRRWCYNLRLDPGVYRGKNHKICSAHFIKEALGLRKLSPGAVPTLHLGHNDTFNIYENELWPPPTPTPSTCHLQQQQQSSLHSLQQQMHSKSYQRRSVASTSSSASSAASHYVDPEMNASYHLAMSASASGSATINASDSMDVCCVPSCESKRHNSENITFHTIPRRPEQMRKWCHNLKIAEDKMHKGMRICSLHFEPYCIGGCMRPFAVPTLHLGHDDEDIHRNPVVIKKLNIRETCCVAVCKRNRDRDHANLHRFPSNVALLRKWCANLRRSVPDGSKLFNDAICEVHFEDRCLRNKRLEKWAVPTLVLGHEDVAYPLPTPEQVTEFYARPTAPNNGEEQGECCVETCKRNPSVDDIKLYRPPEDAAVLAKWAHNLQTEANQLTGMRICNLHFEAHCIGKRMRLWAIPTLNLAGNIENLYENPEQSLLYRRRTTHLKTKLPSISAKPTWVPRCCLPHCRKVRALHNVQLYRFPKLNRSTLAKWAHNLQVPMVGSAQRRLCSAHFEPHVLSKKCPVPLAVPTLDLNSPSGLKIYQNPAKLKASKLCLQRVCIVESCRKTRAQGVQLFRLPHSPTQLRKWMHNIRTRPRAAMRAQYRVCSRHFETHSFNGRRLSAGAIPTLELGHDGDDIYPNEAQAFVEEHCAVEGCEASKEHPEVRLFRFPTDDDDMLWKWCNNLKMNPVDCIGVRICNKHFEADCIGPKHLYKWAIPTKELGHDDAQIELIPNPKLEERYVDPVFKCIVPTCGKTRRFDEVQMNSFPKDPDLFQRWRHNLRLEHLSFQERERYKICNAHFEEICIGKTRLNIGSVPTLELGHDDEDDIFQVNPAELQSNLFGRQRRLLLEESGDGSAKQGLSETKDNRNTDLTATGSNSKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-