Basic Information

Gene Symbol
-
Assembly
GCA_008044355.1
Location
VNKF01010087.1:1-10016[+]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.2e-12 2.8e-09 37.7 5.3 1 85 12 80 12 82 0.82
2 18 1.6e-12 3.7e-09 37.3 0.1 1 86 105 173 105 174 0.83
3 18 8.9e-14 2.1e-10 41.3 2.4 1 87 320 389 320 389 0.80
4 18 1.2e-06 0.0029 18.4 0.3 23 86 466 517 452 522 0.72
5 18 2.2e-13 5.2e-10 40.0 0.9 1 87 570 640 570 640 0.83
6 18 7.4e-11 1.7e-07 31.9 0.1 1 86 675 749 675 750 0.80
7 18 8.9e-12 2.1e-08 34.9 0.0 1 86 760 833 760 834 0.79
8 18 1.3 3e+03 -0.9 0.2 1 8 858 865 858 874 0.90
9 18 0.011 25 5.8 0.0 50 62 879 895 865 917 0.70
10 18 5.7e-06 0.013 16.3 0.1 1 58 923 973 923 997 0.81
11 18 5.9e-12 1.4e-08 35.4 0.3 1 87 1013 1085 1013 1085 0.81
12 18 5.4 1.3e+04 -2.9 0.1 20 45 1091 1112 1089 1120 0.68
13 18 9.7e-16 2.3e-12 47.6 0.6 1 86 1197 1269 1197 1270 0.81
14 18 7.3e-13 1.7e-09 38.3 3.4 1 86 1335 1405 1335 1406 0.80
15 18 1.1e-13 2.5e-10 41.0 3.1 1 86 1498 1568 1498 1569 0.84
16 18 1.4e-11 3.2e-08 34.3 0.1 1 86 1647 1716 1647 1717 0.83
17 18 9.1e-11 2.1e-07 31.6 0.8 1 58 1742 1790 1742 1799 0.84
18 18 2.3e-10 5.4e-07 30.3 0.7 18 87 1808 1866 1797 1866 0.74

Sequence Information

Coding Sequence
GCTAAGATCAAGAGATCTATTTCGGATCTAAAgtgttgtgtacacagctgtaGAAGAAGCCGTTTGGAGCACGGAGCACAGCTGTTTCCCTTTCCAACGGGCAAGCAGCAACACCTAAAGTGGCGTCATAATCTGCACCTGGAACCAGAGGAGGTGAACCGATCAACGCGAGTATGCAGTGCTCACTTCAATCGGCGTTGCATCGAGGGCAAACAGCTGAGGAGCTGGGCGATGCCCACCCAACAATTGGGTCACCACGACCAGCCGATATACGAGAACCCAAAGAATATACCTGGGTTTTTCACACCAACCTGTGCCCTGGGACACTGTCGCAAGAGGAGGAGTATTGACAACGATCTGCGTACCTATAGATATCCTAGAAGCGAAGATCTGCTGGAAAAATGGCGAGTTAATTTACAGCTGGCTCCGGATCAGTGCCGTGGTCGGATTTGTGCAAACCATTTCGAGCCGCAGGTGCGGGGCAAGCTAAAGTTAAAGACGGGAGCCGTGCCCACACTAGAACTTGGACATGATGATGGAGTAATCTATGACAATGAGGCTATAAAGACGGGTATGATGGAGGAAGAGGAAGGCCTCACCACAGAATTCCAGCGCCTGAAACCAAAAAATGAGATGTTTGAAGTGGTTGAAGAGGACGTTGGAGAGAATGTTGGTGAAGAGCAGCACCCAGATTACCAGGACGAAAATGCAGATGAGGATGACAAGGATGACCAATATTTTGATCCTCTTGAACTGGTAGAGACCTTTGAACATCGCAGCAATGATGACGCCcaagatgatgatgaagaaGAGGGCCGAGTTCTGGACTCCCCCTCTGGTTACATGGTCAAGAAGGAGATAGAACAGCTTCCAAGCAGCCCACCTTCACCTTCACCTTTACCCCTACGGCACCAAACTCTGCGTCAAGGCAAGCCTGCCAACAATGTGACGCCCATTTGTTGTCTAAAACACTGCAGGAAGGAGCGTACTGCCTTCCACCTGCTGAGCACTTTTGGTTTCCCAAAGGATCGTCAATTGCTGCTGAAGTGGTGTGCCAATCTGCATCTAAACCCGGATGACTGCGCCGGCCGGGTTTGCATCGAACACTTCCAGCCGGAGGTACTCGGTACCCGTAAGCTAAAGCAGAACGCGGTGCCCACTGTTAACGTTGGACATGATGAGCCGCTTAGGTACTCGTGTCATGGCGTGGATCAGAACCTCGAGGACCAAGACCCACAGCCACAGCATTCGGTTTTTCGGCTTTGGAGCCTGAAACACTGCCGCAAAAGGAAGCTAACGGAGCCACCGGATATTGCCCTGGCCAAGAGGAAACCGCTGGGAATGCCGATAATGAAGCGGGAATGGGAGATGGAGAAGTCAAAGAAGATGACTCAAGCAGACAATAACAAAGAGGTGCTGTCCAAGTGGCTGCACAACACCAAGATCCCCTACGATCCTTCTAGGCACCGAGGCTATCGCATCTGCGGGCTGCACTTTGAATCAGAGTACTTAGAAGCGGATTGGCCGCTACAATGGGTTATACCGACGCTCCATCTAAACCAAGAAGATGAGATCTACTTAAATAGTAAGCCCTTGCAAGAGGACCAGCTCTTAATGTTGGCTCCACTGCGGATAAAGACGGATCTAGCCTTGCTGGGTAGTCCGAGTGCAAGTGCAAGCCCCAGTCCTCGCGGCAGGATCCGGATATGTTGCATTCCCACATGTGGTCAGTTTGGAAGCAATCAAGTAAGGCTCTATCGCTTTCCGACCGAGGAGCAGGCGTTGCTTAGGTGGTTGGTGAACACGCAACAGCAGCCAAGACTCGTAGACCCCAAGGACTTATATGTGTGTCAGTCGCATTTTGAGCCTGAGGCCATTTGTAAGAAACAGCTTCGCAACTGGGCAGAGCCCACATTGAACTTGGGGCACGACGGTCACGTGATTCCAAATGCCAAACACAATGGCAACATTTCTGATAGCCAGGATACCGAGCAGGCAATGAAGTTCATTCGCGAACGATTCTGCTCCGTCATATCTTGTTTTCAGGCAGGAGGACCGGAGGAGGGAGAAGTGAGGCTATATGATTATCCCGAAGATATGGCTACTACTCGAAAGTGGGCAGCCGCTTGCAGACATCGCTCCATGCAGGCCAGGAGCCATGGGTTCAAGGTATGCCAGTTTCACTTCGCTACGGAATGCTTTGACCCAGATACTGGAAAATTGACTGAGGGTTCGGTCCCCACACTGGAGTTGACCAGAGATGATATGGAAAGGCAGTGTCTTGTAGCTGGATGTGTAAAGATTGATCCTAATGGGGCCCGTCTTCGCTACTACAAGATACCAAAGACTGCTGCTCAATTGGAAGCGTGGAGCAACAACCTTAAGATCCATCCCACGGTTCTAATGCAAGGGGAACAGCAGTACATCTGCGAGAAACACTTTGAAGCGTTCTGCTTTGGAGCTAACAAAGGACTGCGTTCTGGTGCCCTTCCAACTCTCTTGCTGGGTCATGATGACGTAGATTTGCTTCCAAATCCGGAAAGTCTCTTCTGCCAGAGCAAGACGGACAAGTGCTGCGTTCCAGGTTGCGGACGTATCTGGCAGGCTGGCGATCCGACCATGGATGAACTGGGAAAGCTTAAGGTCTGCAGTGCTCACTTTGAGAGTTCTGCGATACCCACCGTGGAATTGGGTCATTCTTCTCCGGATATTTACCAAGCGGATTTACCAAGCTTAAAGTCCCAAAAGCGGTCCGTAAAGGTCTATTGCTGTTATCCCAAGTGCGAGGAAATCAGTCTTTCCAAGAATCTGTATTATGGGCTTCCCCAAGAGAAGCATCTGCGAAGTGCCTGGTTAAGGCACATGAACATTGAAGATCCGAAAGATGGAGCAGTCGCAGAGCTTTGCCCGCTGCACTATGTCATTCTCTACCAGCACAGTGCCAAAAACTATCCTGAGTATCACGATTCAAACCGATTGTTTCTTGATGATAACTACAAGGATGCGCGGAACAACCGGCGCGTAAGGATTGTGAGCTGTGTGATCAAGGGCTGCGACATGGTTAAGCCACGGGATGGGATACCATTGCACGGGATGCCGCAGAACCAGGACATCCTGCAGATGTGGATAGATAATGGTCAGTTTGAGTTCTTAGAGCAGCAGCGGTACATGCTTAAGGTGTGTCACAACCACTTTGAGCCATGCTGTTTCTTCGACGATAGACGCTTGCTCTCATGGAGCGTGCCGACTCTGCACCTACCTGGCGAAGCATTTCACCAAAATCCTACCGCCGAACAGTGGCAAAACATGGTCAAAAAACAATCAGCAGCCAAAACAAATGCAGTGGAGAAAGAGGAGTCTGAGCTATATACGGATGAGGATAGGACGGAGcccattttaaaaatggagCATATTGAATCTGAATATGAAGATAAAAACTCGGAGATGCAGGCCCTAGAAGTCCTCCTGGAAGTTGGGCATGTGGAACGAATGGAGAGCTATGAGAAAGTGGATAAATCACCGGTTATCTATACCGAAAATGCACCCTTCCGATCGTCACCAATACGTGGCCAATACAATGCTAATCAGTGTGCCGTAGAGGGATGCCAGGTGACCGTCGAGGATGTGGACGGCACTATTAAACTGCACAAGTTCCCCGCGTCGCAGGAAGCCGCACAAAAGTGGAAGCACAACACCCAAGTTGACATGGACGAAAAGTTCTGGTGGCGCTACCGCATATGCAGTTACCACTTCGATCAGGAGTGCTTTCAGAGCGCTAGGATTCGAAAGGGCGCGATGCCCACGCTTTTGTTGGGACCTCAGCGACCGGATAAGGTCTACGATAATGAATTTGCACAAccagaggcagaggcggaAGAGTCTTTTTTAGAGCCACCGGGAATTCAGCTGGAGGAAGGATGTACGTCTGTGTCTAGAGTTCGAAAGGAGGTTTCTAGTTTATGCCTGCCGCCACGGGCGCCGCCTCGAAAGTCGAGCAAGTTTTGCCAGATTTATTCTTGTACGAATCACCTGACAACTGAGAACATGACACTCCACAAGTTTCCCCACTCAGAGGACATGTGCCTTAAATGGCAGCACAACACGCAAGTGCCATTCGATCCCTACTACCGCTGGCGTTACCGCATCTGCAGTGCCCATTTCCATCCAGTGTGTTTGGTCAACATGCGTCTAGTCCACGGAAGCGTTCCCACTTTAAAGCTAGGACCCAAGGCTCCATCCGAACTGTTTGACAACGACTTTAATGCCATCAACCTAAGGCTGGACAAAAGGTTGACGGAGTCCAATGCCAATGTGTATATCAAGCATGAAAAGAGGGAAGAGGGTGAAGGCTCGCCAATTTTGCTGGAGCCCGAGCTCCAGTTTCAAGAGGATCAAGACGATAGGATATCAGCATGGAACAGCAAACTGCAATTGCGACCTATAAAGCTGGAGAAAATAAGTTATAGCCAGAAGAAGTTTGGCTCTGATAAGTGTTTGCTGGCTCACTGCCAACGCCAAAGGTTCCAACATGGCGTCCACATTTATAAGTTTCCAAGAGCGAGGCGGCAACAGGAGCGTTGGATGCACAACCTCCGCATCCGCTATGATGAGCGTACACCGTGGAAATTCATGATCTGCAGCGTTCATTTCGAACCTCGCTGCATCAGCTTAAGGAAGCTGCAACCTTGGGCGGTCCCCACACTGGATCTGGGCGACAATGTGCCAGAGAATATCTTTTCGAACGAACAGTGCGAGGAGGATTTGGTGATCGATCGCAGCGAGCTAGAGAGCGACGCCGAGGATGAAGAAGGCTTACAGGAGGACGACGATGATCAAGACGAGGACGATCTGAAGCCGGATGTTGGAATAAAAAGGCGAAGACGTTTCAATAGAGATTCCTCCTGCCCTACCCAGACACCACCCTGGAAAGTCAAACAATGCTGCCTCCCCTATTGCCGTGCCTTCCGAGGCGATGGCATCAAGCTTTTTCGGCTACCGAGCAACCAAAACTCCATTAGCAACTGGGAACTGGCCACAGGAATGGTTTTCAAAGAATCACAACGGAATACGCGATTGATTTGCAGCCGTCACTTTGAGACAGAGCTGATTGGAGTGAGGCGTCTAATGCGTAACGCCATTCCCACAAAGCACTTAAATCCGCATAGCGTTGACCAGGTCCGTACTAAAAAGGAGAAGAGTCCTCAAGCCTCTATTATTCCCATCTGCTGCATGGCGGACTGCCACTACAATGGAAATGTGAAGCTGCACAAATTTCCCAGTgATCCCACACTGCTTAAACAGTGGTGCCAGGCTCTTCGGCTCACCGACACGCAGCGTTATTTTGGCAAGCACATTTGTTCGATGCACCTGCCGATGAACGACACACTGAGCTGTGTTATCTGCGGTGGAGATAACATAGAGTTGCCGTTGCTTGGGTTTCCGGAGAACCGCAACCAGCGCGCCAAATGGTGTTATAATCTCAAAATTGAGACAATACCAAAGTGGGACCACTCAAAGCACATATGCTGCCGGCACTTTGAGTCCTATTGCTTTGATAGGCCGGGTGAGCTACGTCCAGGAGCAGCTCCCACGCTCCATCTGAATCACAATGACACAAACATATTCTTCAGCGACTATGCCACTGGTCTTTCGTCCTCGCCAACACGCAATCAAATTAAAGACGAGCCGCTGGAATCGGAGTCTGACGAGATGCTGCTGGTGTAG
Protein Sequence
AKIKRSISDLKCCVHSCRRSRLEHGAQLFPFPTGKQQHLKWRHNLHLEPEEVNRSTRVCSAHFNRRCIEGKQLRSWAMPTQQLGHHDQPIYENPKNIPGFFTPTCALGHCRKRRSIDNDLRTYRYPRSEDLLEKWRVNLQLAPDQCRGRICANHFEPQVRGKLKLKTGAVPTLELGHDDGVIYDNEAIKTGMMEEEEGLTTEFQRLKPKNEMFEVVEEDVGENVGEEQHPDYQDENADEDDKDDQYFDPLELVETFEHRSNDDAQDDDEEEGRVLDSPSGYMVKKEIEQLPSSPPSPSPLPLRHQTLRQGKPANNVTPICCLKHCRKERTAFHLLSTFGFPKDRQLLLKWCANLHLNPDDCAGRVCIEHFQPEVLGTRKLKQNAVPTVNVGHDEPLRYSCHGVDQNLEDQDPQPQHSVFRLWSLKHCRKRKLTEPPDIALAKRKPLGMPIMKREWEMEKSKKMTQADNNKEVLSKWLHNTKIPYDPSRHRGYRICGLHFESEYLEADWPLQWVIPTLHLNQEDEIYLNSKPLQEDQLLMLAPLRIKTDLALLGSPSASASPSPRGRIRICCIPTCGQFGSNQVRLYRFPTEEQALLRWLVNTQQQPRLVDPKDLYVCQSHFEPEAICKKQLRNWAEPTLNLGHDGHVIPNAKHNGNISDSQDTEQAMKFIRERFCSVISCFQAGGPEEGEVRLYDYPEDMATTRKWAAACRHRSMQARSHGFKVCQFHFATECFDPDTGKLTEGSVPTLELTRDDMERQCLVAGCVKIDPNGARLRYYKIPKTAAQLEAWSNNLKIHPTVLMQGEQQYICEKHFEAFCFGANKGLRSGALPTLLLGHDDVDLLPNPESLFCQSKTDKCCVPGCGRIWQAGDPTMDELGKLKVCSAHFESSAIPTVELGHSSPDIYQADLPSLKSQKRSVKVYCCYPKCEEISLSKNLYYGLPQEKHLRSAWLRHMNIEDPKDGAVAELCPLHYVILYQHSAKNYPEYHDSNRLFLDDNYKDARNNRRVRIVSCVIKGCDMVKPRDGIPLHGMPQNQDILQMWIDNGQFEFLEQQRYMLKVCHNHFEPCCFFDDRRLLSWSVPTLHLPGEAFHQNPTAEQWQNMVKKQSAAKTNAVEKEESELYTDEDRTEPILKMEHIESEYEDKNSEMQALEVLLEVGHVERMESYEKVDKSPVIYTENAPFRSSPIRGQYNANQCAVEGCQVTVEDVDGTIKLHKFPASQEAAQKWKHNTQVDMDEKFWWRYRICSYHFDQECFQSARIRKGAMPTLLLGPQRPDKVYDNEFAQPEAEAEESFLEPPGIQLEEGCTSVSRVRKEVSSLCLPPRAPPRKSSKFCQIYSCTNHLTTENMTLHKFPHSEDMCLKWQHNTQVPFDPYYRWRYRICSAHFHPVCLVNMRLVHGSVPTLKLGPKAPSELFDNDFNAINLRLDKRLTESNANVYIKHEKREEGEGSPILLEPELQFQEDQDDRISAWNSKLQLRPIKLEKISYSQKKFGSDKCLLAHCQRQRFQHGVHIYKFPRARRQQERWMHNLRIRYDERTPWKFMICSVHFEPRCISLRKLQPWAVPTLDLGDNVPENIFSNEQCEEDLVIDRSELESDAEDEEGLQEDDDDQDEDDLKPDVGIKRRRRFNRDSSCPTQTPPWKVKQCCLPYCRAFRGDGIKLFRLPSNQNSISNWELATGMVFKESQRNTRLICSRHFETELIGVRRLMRNAIPTKHLNPHSVDQVRTKKEKSPQASIIPICCMADCHYNGNVKLHKFPSDPTLLKQWCQALRLTDTQRYFGKHICSMHLPMNDTLSCVICGGDNIELPLLGFPENRNQRAKWCYNLKIETIPKWDHSKHICCRHFESYCFDRPGELRPGAAPTLHLNHNDTNIFFSDYATGLSSSPTRNQIKDEPLESESDEMLLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480199;
90% Identity
iTF_00480199;
80% Identity
-