Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_008044355.1
Location
VNKF01007513.1:69163-81722[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-10 3e-07 30.1 0.0 1 38 243 281 243 285 0.90
2 2 6.9e-19 1.6e-15 56.6 0.0 1 43 691 734 691 736 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGCAATGGAAACACTACCAAGAGCAACTGACGCGCAGCCACTTGAATATCGAGGAGCAACAGCCCATAGCAATAGTGTCCGGTTCCGAGGACGAGCCACCGCAATACAACCACAGCAGCAAGGACCACTGTAAGCCAGAGAACCACCGTTTAGAGCAGTATCACAACCGGCTGCTGGAGGAAGATTTTGAAAACAACCAAACATCACACGATTCATCACGTACTCCGACACCTGGATCCACAGTGACAGCCACCAGTACACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGCCAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCACGGCGAATTGGTGGCcgaaacagcagcaacaacagctacGATTAGTAGCAATAGTAATAGCCACATTCATCAGCTCGACAGTGACAGCAACTCGAGCGCATCACTGCCCCAccaaaccaacaacaacaactgcagcagcagcagcagggcacgCCAcattgctgctgcaactgcaactgcaacggccactgcagcagcaactcccGCAAATTCCCTGGAACTTCCCGCACTCAAAGATACAAGCAGTCCCAGTGCCGATGCACCGCTCGATCTTAGCAGCAAGCCCTCGCCGAACTCATCGATTAGCGGCGATGTCAAGTCCAGCAGAGCCTGTGCCACGCCTACGCCGACGGGAAGGCGGGCGTACAGCGAGGAGGACCTGAACCGGGCCCTGCAGGATGTGGTGGCCAACAAGCTGGGCACCCGCAAGGCGGCCAGCCTGTACCATGTGCCCCGCTCCATTCTGGTCAATCGGCTGTACaagatgcagcagcaggatagcgaccaggagcagctggatCAGCAGGAGCCAGATCCCGAGGACTCCAACGATGACGGTGAGGCGGAGGTGGACAGCAATGCGTCCACTCCGGCGCCGGGATATCCCGCGGACTTTGCCCTCCGAAAACTGAGCCACCTGTCGTCCGAGCACAATGGCAGCGACCTGGGCGAGGACCTCGATCGTAGTGGATCTCCCAAGCTGGGACGGCTTCCgtctggcggcggtggcggcggcaatggCAGTGGCAATCCCGATGGCTTGCCCCCCATACCGCTGGATGCCAAGGTCCTGATGCACACCCTCATGCTGGCCGCCGGCATTGGTGCAATGCCCAAGCTGGATGAATCGCAGACGGTTGGTGACCTGTTCAAGGGCCTGCTGGTGGCCAACAGCCGGGGGATGTTGACCGAGCCGCTGCTCAGTCTGCTGGCCGCCAATCAGGAGAGCAACGGCAGTGCCTCATTGCTcctccagcaacagcagcagcaccagcagcaccagcagcagcaacacgtGGCCGCCGCCTTTCGCCATCGCCTGCCCAAATCGGAGACGCCGGAGACAAACTCCTCGCTGGATCCGAACGAGGCGGGCGAGGATCCCATATTGAAGATTCCGTCCTTCAAGGTCAGCGgcccggccagcagcagcagcctctcCCCGGGCCTGGGTCACCATCCTTTGAataacaacatcaacaacaacagcaactgcagcagcaaccgaAATGGGAGCAACCGCAGTCCCCACTCCGCATCCCCCATGCTGGCCGCGGCGGTGGCCCAGGGAGCCTACTCCTCGGGCAACAGTCTACtgccctcgtcctcgtccagcATACAGAAGATGATGGCCAGCAACATCCAGCGGCAGATTAACGAGCAGAGTGGCCAGGATGGCCTGAGGAATGGCAATGCCAGCgattgcagcagcaacaatggtggctccggcggcggcggcggctcctcctcctcatcgatGGGCTACAAGAAGCCGAGCATTTCGGTGGCCAAAATCATCGGCGGCACGGACACCTCTCGCTTTGGTGCCTCTCCCAATCTCCTGtcgcagcagcaccatcaccCCAGCCATCCCGGCCACCTcagccaccaccagcagcagcagcagcagcagcagctgagtGCCCAGGAGGCGGCTGCTCTGGCGGCGGGCAAGGGCACCAGGCCCAAGAGGGGCAAGTACAGGAACTACGACCGCGACAGCCTGGTGGAGGCGGTGAAGGCGGTCCAGCGGGGCGAGATGTCGGTCCATCGAGCGGGCAGCTACTACGGCGTGCCCCACTCCACGCTGGAGTACAAGGTCAAGGAGCGGCATCTGATGAGGCCGCGGAAGAGGGAGCCCAAGCCGCAGCCGGATCTGGTGGGCCTGACGGGACCCGCCAACAAGATCCACCTGGACAAGCTGAAGCCGGGCAACCACAGTGGCTCCAAACTGAGTAACGCCCTCAAGAACAACAGCcaggcggcagcggctgcggcggccgctgcggcggctgctgcggctgccacCCCCAACGGCCTGAAACTGCCCCTCTTCGAGGGCGCTCCTCACCAGCTTCCGTTCCAGTCGAACGTGTTCTGGCCCCAGCCGAATGCCACGAACCCCTACGGCCTGGACTTCAACAGCATGGCGGAGGCGAttaggcagcagcagccccgaGGGGCTGGCGGCAATCACCACGGACCGATGAAGAGCGCGCTGGCGGAGATGGCCGAGAATATGTACGACGGCATCATCCGCAAGACGCTGCAGTCCAgcgagtcgtcgtcgtcggggAACGGCAGTGCGGCCGGCAACGGCAGTAGCAATGGCAATGGACATGGTCATGGTCATGgtcatggccatggccatggccatgccCTGCTCGATCAGCTGCTGGTGAAGAAGACACCGCTGCCGTTCACGAATCAGCGGAGCAACGACTATGCCGCCACCTGTTCCAGTGCCAGTGCGGAGAGCGTTAAGCGGTCGGGCAGTCCGCTGGGCAACTATGCGGACATCAAGCGGGAGCGCCTGAGCGCCgagagcggcggcagcagcgacgAGGAGCACTCCAGACACACGccggccaacaacaacaacagcgatcTGGCGCACAACAAGAACAAGGGAAGCGCTTCCGCCACATCCTCGTTCGGCGCCAGCGGAAATGGTCAAGGCCATGTGAATGCCAATGGCAATGGACGGAGCAGCCGGATGACGTCGCGCGACTCGGAGACGGATGCCAGCAGCCTGAAGAGCGCGGAGAGCGGCCACCACCAAAACCACAAATCAATGGATCTCAATGGCAGTCACATCAAGTGCGAGTCCGAGGCGGAAATGGCGCCATCGGGCAGTCCCATACTGCACGAGAAGCTGGCCCAGATCAAGGCCGagcaggtggagcagcagcagttatAG
Protein Sequence
MGRRQWKHYQEQLTRSHLNIEEQQPIAIVSGSEDEPPQYNHSSKDHCKPENHRLEQYHNRLLEEDFENNQTSHDSSRTPTPGSTVTATSTPSPPPEPNDWRPSAKCNFCVNGRLLTVNAHGELVAETAATTATISSNSNSHIHQLDSDSNSSASLPHQTNNNNCSSSSRARHIAAATATATATAAATPANSLELPALKDTSSPSADAPLDLSSKPSPNSSISGDVKSSRACATPTPTGRRAYSEEDLNRALQDVVANKLGTRKAASLYHVPRSILVNRLYKMQQQDSDQEQLDQQEPDPEDSNDDGEAEVDSNASTPAPGYPADFALRKLSHLSSEHNGSDLGEDLDRSGSPKLGRLPSGGGGGGNGSGNPDGLPPIPLDAKVLMHTLMLAAGIGAMPKLDESQTVGDLFKGLLVANSRGMLTEPLLSLLAANQESNGSASLLLQQQQQHQQHQQQQHVAAAFRHRLPKSETPETNSSLDPNEAGEDPILKIPSFKVSGPASSSSLSPGLGHHPLNNNINNNSNCSSNRNGSNRSPHSASPMLAAAVAQGAYSSGNSLLPSSSSSIQKMMASNIQRQINEQSGQDGLRNGNASDCSSNNGGSGGGGGSSSSSMGYKKPSISVAKIIGGTDTSRFGASPNLLSQQHHHPSHPGHLSHHQQQQQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKIHLDKLKPGNHSGSKLSNALKNNSQAAAAAAAAAAAAAAATPNGLKLPLFEGAPHQLPFQSNVFWPQPNATNPYGLDFNSMAEAIRQQQPRGAGGNHHGPMKSALAEMAENMYDGIIRKTLQSSESSSSGNGSAAGNGSSNGNGHGHGHGHGHGHGHALLDQLLVKKTPLPFTNQRSNDYAATCSSASAESVKRSGSPLGNYADIKRERLSAESGGSSDEEHSRHTPANNNNSDLAHNKNKGSASATSSFGASGNGQGHVNANGNGRSSRMTSRDSETDASSLKSAESGHHQNHKSMDLNGSHIKCESEAEMAPSGSPILHEKLAQIKAEQVEQQQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482902;
90% Identity
iTF_00480090;
80% Identity
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