Basic Information

Insect: Drosophila lacicola
Gene Symbol: BCL11B
Assembly: GCA_035045355.1
Location: JAWNPB010000148.1:12710894-12729937[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.029 2 9.1 2.4 1 23 302 325 302 325 0.95

2 6 2.9e-06 0.0002 21.7 1.0 1 23 793 815 793 815 0.97

3 6 0.014 0.93 10.2 4.7 1 23 821 843 821 843 0.99

4 6 1.3e-06 8.6e-05 22.9 3.2 2 23 1132 1153 1131 1153 0.97

5 6 1.7e-05 0.0011 19.4 3.3 1 23 1159 1181 1159 1181 0.99

6 6 3.1e-05 0.0021 18.5 0.4 1 22 1189 1210 1189 1210 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.029	2	9.1	2.4	1	23	302	325	302	325	0.95
2	6	2.9e-06	0.0002	21.7	1.0	1	23	793	815	793	815	0.97
3	6	0.014	0.93	10.2	4.7	1	23	821	843	821	843	0.99
4	6	1.3e-06	8.6e-05	22.9	3.2	2	23	1132	1153	1131	1153	0.97
5	6	1.7e-05	0.0011	19.4	3.3	1	23	1159	1181	1159	1181	0.99
6	6	3.1e-05	0.0021	18.5	0.4	1	22	1189	1210	1189	1210	0.97

Sequence Information

Coding Sequence: atgtataacaaaatGCTGTCGATCAGTGAGGATCATGGATTCCGTTCGCTGAGCCATTCCGACTCGACAGAGAACGATGCGGTCGCCGCGCAGGACATACTGACGTGCGGCGCGTGCCAGAAGACCTTCGCGCTGTCGGACATTGTCCGGTTCATACAGCACAAGGTGCTGCAGTGCAACAAGGAGAACTATGGCCAGTGCACCACACAGGCGCCCAGCATGGATCGCGATGCCGACGAGGGCCGCCCACTGAGCCTGGTCAATCGCCGTCCCTCCATATCGGCGCCCATCACAGGCCGCAAATCGGCGCCAGCTGCGTCCGCTCCGCCCAGCGccacggctgctgcggctgcagcggcagcggcggcggcaacggcagcggcaacggcagctgctgctgcggcggccgcGGTGGCCAGCAGCGCAGCGAGCGGctcacgcatacacacaccgCCGCCAAGTCCAGCGGATCTGCTGGCCGATGGCGCCAGCAGCACGCCCAAGCGCCTCGTAGATGAGAACGACAATACGACGCCCAAGGCGGACAGCGATGCGCTGACCACAGCCAGCGGCACGCCCCTGGAGGCGCACAGTCCCAGCCGCGCTAAATCCCAGTCGGAGCAGCCGCCCGCGCCGCATCTTGCGGCGGACTGCACGCTCGACGATGACAAGCCAAAGGTCAAGCAGGAGCCCTATGCCGATGACGAGCTGCCCCAAGACGATgacgaacagcagcagcccgacgaggagcagcagcaccaccaccaccaccaggaGGAGCAATCCCAGCTGGATGCCCAGCTGCTGTCCACGGCGGACGAGTGCCAACAGCCGCTCGCCAAGCGGCCCAAAATGGAGCTCGTCGATGCCGAGGCCAACACAGTGCATACAGAGCCCAGCAATTACACCTGTTCGACCTGCAAGACCCGCTACACATCCGCCTGGCGGCTCATCCAGCACGTGCAGCACTCGCACGGCGTCAAGATCTACGTGGAGTCGGGCGGCGGTGGCGCCACCTTGACTGTGGCCACGCCCGCCGCCCTCAATGCTGCCgcatcggcagcggcagcgaacGCCAGCGTCAGCCCCAATCGCAGCCTCAGTCCATCGGCAGccgcggcagcggcagcagcggccgcagcagcagcagcagcagctgttggtgTCCCGCTGCCGTTGCACGCGCTGATGGCGCAGGCCGTCGCctcccagtcgcagtcgcagtcgccggcgccaaagcgcagcagcagcaacagcagcgcagccgccgccgccgcagcagcagcatctgcagcagcaggaggagttGGTTCAGCCaacacgagcagcagcagcaatgcgaGCAGCGGCAATTCGCCGacgcagcaactgttgcagcagcgcgcacagcagcaacaacagcagcagcaacagcaacaacagcagcagcaacagcaacagcagcagcagcagcaacagcagcagcagcagaacatGGCCACGGCCATGGCAGCGGGCATGCGTCATCATCCGCTGCTGGCACCGCCGGAGGCAATGCACGCGAATCCGTTCCAGCTGCTGCgcatgccgctgccgccggcgCTGGCCCAGGGCAATGTAGTTCCTAGCGTGGCGCCGCTTTTCGGCAGACCCACGCCCGCCGATCACTATCGCATGGAGCAGCTGGTGAGCGAGCAGTTCCGGCATCATGGCTTCAATctggccgccgccgctgccgccgcccagGCTCAGTTCAATGCCAacacccagcagcagcagcagcagcagcagcagcaaccgatCCCTGGCGTTGCTGTCAACGTTCCTAGCGGCATCGAGCAGCGGCCGCCCtcgagcaacagcagccagcgcGGCTCTGTGCCGCCCGCCGCGTTGCCGCCGCCTTCGCTCAgctcacagcagcagcagcagcagcagcagcaacagcaacagcagcagcagcaacaggctgCTGCAGTGAGTCCAGCGGGCGCCGCATTGAATCTGGAACCGCAGCAGATGGATTTTTACTCGCAGCGATTGCGTCAGCTTGCGGGCACAACAAGCCCTGGAGCTGGCAACATTGTTAACTCGAGCTCGCCGAGTCCACGACAGAAGCAATCGCCGCGCTTTGCGAGCCCCTCGCCCAGCTCCGCGGCCAGCGTGCAGCTGGCGGCGACGCCGCGTCCCCATTCCCTGACGCCGCCCGAGCGGAGCACCGAGAAcggcggccagcagcagcacagccagCACGGCCAGcacgggcagcagctgccgagCACGCCACGCTCGGCCAGCACGCCGCCGAGCAAGCCACATGGCCCAGCCGCGGCAGCGTCAGCGGACTCGGAGCGCAACGAGGCGGAGAGGGAGACCCTGGAACTGGCGACCAGCTGCTTCGCGTGCGGCTACTGCGACAAGAAGTTCCGATTCGAGAACAATCTGATCATCCACCAGCGGACGCACACCGGCGAGAAGCCGTACAAGTGCACCGCCTGCGACTTTGAGTGCTCCCACATCCAGAAGCTGATGAAGCACATGCGCGTCCATCGCAGCCCCGCCGAGGGCCAcgacggcggcagcagcagcaatggcggCGACAACAATCAGGATGGCCACGATGGCGGCAGCAATGCCGATTCGCTGGAAACGAACGAGGCGGACAACGACGACGATCCCAATCCGGACGAGTCCGACGACGAGCTCAACGAGGATGACGTCGATGCGGATGCCGACGGTGACGGtgagggcgagggcgagggcgacGAAGATGATGAGGATGAGCTGGACGATTGCGAGGATGTCGACTACGAGGCCGAGGATCTCAGCGTTAACAATCGCATCGATGGCAAGAGCCAAAGCCCCAAGACGACTAGCTCCGGCGCCACCTCGCTGGTGGGCGAGCTGATGGACAAATTCGGGCTCTCCAACATAGCCCAATACTCGGAGGCCTACAAGCAGGCGCTGCAGGAATCCGGACGCAAGGAGGCCGCCGCAgtggccgctgccgctgcagctgccgccgctgtcgacaacaacaatcgcgGCTCCGCTGGTCCGGGAGccggaactggagctggagccggatCTGGTGGCCCCGCCGGCACGGACAAGCTGAACGGGCTGCCGGTGGCGGCGCTGCGTCTGCGCGACGAGTTCGCCAAGAACTGCAACATGTtccagccgcagccgcaggaTGCCGCCGGCCAGGTGCCGCTCTTCAATCCGTTTCCCAATCCCTTCGAGCTGTCCAAGCGCATGAAAATGGACGGCGGCGACTGGTGGGGCATGTCGGCGCTCCATCGCAACGAGGCGCTCTTCGAGAACCTGAAGCTGAAGCCGCTGGGCTTGGGCGGCGCCAACTCGCTGCTGCAGGGGCCGCTGCTGAAGAAGGAGTCGCGGCAGCGCAACGATACCTGCGAGTTCTGCGGCAAGGTGTTCAAGAACTGCTCCAACCTGACCGTGCATCGGCGCAGCCACACCGGCGAGAAGCCGTACAAGTGCGAGCTGTGCTCCTACGCCTGCGCCCAGAGCTCCAAGCTCACCCGCCACATGAAGACGCACGGCCGCACCGGCAAGGATGTCTATCGCTGTCGCTTCTGCGACATGCCCTTCAGCGTCCCATCCACCCTCGAGAAGCACATGCGCAAGTGCGTGGTCAACCAGGGCAAAgcggcagccgctgccgccaatGCAGCCaatgccgttgccgctgcccagGCCGCCGCCGCGGCCCAGCAGCTCCAAGCGGCGGCCGCCCAGGcccaacaccagcagcagcagcatcaacagcagcagcagcagcagcagcagcaacagttgccaacGCAATCGCAATTGTCGCCTCCTTGCCccatgggcgtggctgtgggcTTTCCACCGCAGTTCGGCGTCGCCGGCGGCCACAATCTGTCGCTGGCGGGCAGCGTGAGCGGCGACAACGATTCGAATGCATCCTCCAGCCTGCCCGCGCACTCCATTTCGCTCAAGGAGGAGGCATGA
Protein Sequence: MYNKMLSISEDHGFRSLSHSDSTENDAVAAQDILTCGACQKTFALSDIVRFIQHKVLQCNKENYGQCTTQAPSMDRDADEGRPLSLVNRRPSISAPITGRKSAPAASAPPSATAAAAAAAAAAATAAATAAAAAAAAVASSAASGSRIHTPPPSPADLLADGASSTPKRLVDENDNTTPKADSDALTTASGTPLEAHSPSRAKSQSEQPPAPHLAADCTLDDDKPKVKQEPYADDELPQDDDEQQQPDEEQQHHHHHQEEQSQLDAQLLSTADECQQPLAKRPKMELVDAEANTVHTEPSNYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVESGGGGATLTVATPAALNAAASAAAANASVSPNRSLSPSAAAAAAAAAAAAAAAAVGVPLPLHALMAQAVASQSQSQSPAPKRSSSNSSAAAAAAAAASAAAGGVGSANTSSSSNASSGNSPTQQLLQQRAQQQQQQQQQQQQQQQQQQQQQQQQQQQQNMATAMAAGMRHHPLLAPPEAMHANPFQLLRMPLPPALAQGNVVPSVAPLFGRPTPADHYRMEQLVSEQFRHHGFNLAAAAAAAQAQFNANTQQQQQQQQQQPIPGVAVNVPSGIEQRPPSSNSSQRGSVPPAALPPPSLSSQQQQQQQQQQQQQQQQQAAAVSPAGAALNLEPQQMDFYSQRLRQLAGTTSPGAGNIVNSSSPSPRQKQSPRFASPSPSSAASVQLAATPRPHSLTPPERSTENGGQQQHSQHGQHGQQLPSTPRSASTPPSKPHGPAAAASADSERNEAERETLELATSCFACGYCDKKFRFENNLIIHQRTHTGEKPYKCTACDFECSHIQKLMKHMRVHRSPAEGHDGGSSSNGGDNNQDGHDGGSNADSLETNEADNDDDPNPDESDDELNEDDVDADADGDGEGEGEGDEDDEDELDDCEDVDYEAEDLSVNNRIDGKSQSPKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESGRKEAAAVAAAAAAAAAVDNNNRGSAGPGAGTGAGAGSGGPAGTDKLNGLPVAALRLRDEFAKNCNMFQPQPQDAAGQVPLFNPFPNPFELSKRMKMDGGDWWGMSALHRNEALFENLKLKPLGLGGANSLLQGPLLKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAAANAANAVAAAQAAAAAQQLQAAAAQAQHQQQQHQQQQQQQQQQQLPTQSQLSPPCPMGVAVGFPPQFGVAGGHNLSLAGSVSGDNDSNASSSLPAHSISLKEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00547608;
90% Identity: -
80% Identity: -