Basic Information

Insect: Drosophila lacertosa
Gene Symbol: -
Assembly: GCA_004143845.1
Location: SCDZ01000351.1:116661-121738[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00045 0.047 14.4 0.3 1 23 139 161 139 161 0.98

2 14 9.4e-05 0.0098 16.5 1.3 1 23 392 414 392 414 0.98

3 14 6.7 7e+02 1.3 0.4 1 23 420 443 420 443 0.88

4 14 0.17 18 6.2 0.4 1 23 466 489 466 489 0.94

5 14 0.00082 0.086 13.5 1.9 3 23 754 774 753 774 0.92

6 14 0.033 3.4 8.5 1.4 1 23 780 803 780 803 0.98

7 14 4.1 4.3e+02 1.9 2.2 3 23 841 861 840 862 0.61

8 14 0.0021 0.22 12.3 0.7 1 23 883 906 883 906 0.97

9 14 0.0044 0.46 11.3 0.6 1 23 1017 1040 1017 1040 0.90

10 14 0.00045 0.047 14.4 4.7 1 23 1053 1075 1053 1075 0.98

11 14 0.00047 0.05 14.3 0.3 2 23 1081 1103 1080 1103 0.96

12 14 0.00019 0.02 15.6 2.9 2 23 1110 1134 1109 1134 0.90

13 14 0.034 3.5 8.5 0.1 1 23 1139 1161 1139 1161 0.97

14 14 0.21 22 6.0 1.4 1 23 1167 1190 1167 1190 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00045	0.047	14.4	0.3	1	23	139	161	139	161	0.98
2	14	9.4e-05	0.0098	16.5	1.3	1	23	392	414	392	414	0.98
3	14	6.7	7e+02	1.3	0.4	1	23	420	443	420	443	0.88
4	14	0.17	18	6.2	0.4	1	23	466	489	466	489	0.94
5	14	0.00082	0.086	13.5	1.9	3	23	754	774	753	774	0.92
6	14	0.033	3.4	8.5	1.4	1	23	780	803	780	803	0.98
7	14	4.1	4.3e+02	1.9	2.2	3	23	841	861	840	862	0.61
8	14	0.0021	0.22	12.3	0.7	1	23	883	906	883	906	0.97
9	14	0.0044	0.46	11.3	0.6	1	23	1017	1040	1017	1040	0.90
10	14	0.00045	0.047	14.4	4.7	1	23	1053	1075	1053	1075	0.98
11	14	0.00047	0.05	14.3	0.3	2	23	1081	1103	1080	1103	0.96
12	14	0.00019	0.02	15.6	2.9	2	23	1110	1134	1109	1134	0.90
13	14	0.034	3.5	8.5	0.1	1	23	1139	1161	1139	1161	0.97
14	14	0.21	22	6.0	1.4	1	23	1167	1190	1167	1190	0.95

Sequence Information

Coding Sequence: ATGGCGCAGAAACGTGTGAAAACAGAGGACATGGCAGTGAATTATAAATTTGCGTGTCGCTGTTGCCTCAAATCCGAGGCAGAATTCTTCAAGCTGGACTCTCTAATCGAGTGCGGGATTGGTGATAATGATgcgtccacaacaaaattgccCATTATACGTTTACTATTGTTCTGTATGCGCACCGAAAATCTGCCTGATTTGCCGCAATACATTTGTGTTGAATGCAGCAAAAGTCTGCAAATCGCCTATTTATTCATACAGAATGGCCTGCGCGCCCACGAGATACTCTGCCGCAAACTGTGTCCCGGTCAAGCAAAGTTTCCAACGCGTTCGAATGGCCAGCACGCGTTGCAAGTGGACACAACGATGTCAAGGCAGAACGAGTTTAAGGGCCCAAGAGCCGCCGTGAGACACGAATGCAAAGTATGCGGTGCTATTATCTACAATCGTGTTGAGCTCAAGCAGCACATACGCATGCACACAGagacgaCACGACATCAGTGCAAATTGTGCAATTTTGTCACGCTCAAGCATCGCCAGCTACCGGAGCATTATCGCAAGGCGCATGGCCTGACGGCCGCCCAAATTGAGCATCAGCTTAAAATACGTAGATCCATGCAGGCGGCAGCGAATGCCATAATAACACCACCAGCGCCACCAGTAACAGATGCGGACGATGAACAGGTGAAGGTGTGCACTCTGGAGGATATGGAGCTGCTTATACCCACTGTGCTGACGCCGGAGGATTTCACGCATCCACAATTAGATGCGGAACAGTTGCGTGATATTGAGCAACAATTGTCATACTCGCTGCCCGTCTCACAGCCGAACAGCTCAACATACAATGCCGACGGCTTACCAGCTGAACCAACGATAGCGACTGGCGATAGCGCTAATATGAGCATTGGTGCCGAATTTCTGGTCATGCCCGATGGTTCGTTGCAGCAGGTAAATGATGCCGGCGTGGTATTCGAGTATATTGACGACAGCAAGAGCACCAATGCGACCAGCAACATGACGCTGCAGAGCCTGTTGGGTGATTCCAAGACAGATTTAACATATGACGCCATGGATATTGATCTGAGTCATATGGTTGTTGACAACGCGCTGCCGCAGATAACagTTAAGCCAAAGCCACGGCCAGCGCCGGCGTCAACAGGCGCCCtgaaacacaaatgcaaattgtgccCCAAAGCATTTCCCACGGTGGCACGTCTGAAATCTCATCAATTAACGCATAGCCATTTGCCCAAATTCTATTGCGATCAGTGCGCCTACTATTCGCTACGCAGTGCGGATCTTATCCAGCATTATACAATGGAGCACAAGTCCTGCATTAGCGAGAGTCgaataaatcattttgaaaAGTTGCCGGGGGACAGAGGTCGTATTTATTCCTgcgatttgtgtttgtttgagACGCCGAGCAGCGGCCAGCTGCGTGTACACTATAGCAATAAGCATCTAGTAGTGCCGAGTGAGGTGCAGCTGCGGCCCACTTGGACGCATGAGTCACGAGAGGGTCGCGGCAGCTCGACAACTGGCGGCAATGGTTCCGCTCAGCCGGACATACCGCTGGGTATCAAATATCCACCAATaatggcggcggcaacggcagaGCCAACAGCGGCGTCAACAACCGACATGGATCAGTCGGGTCAGGCAACTACGACGACTGTGGTAACGCCGGGTGGCGAGATAAATGTTGTGGTTGATGCCACATCATTGTTCTATGCAGCGGGTGCAGCCGACCAGTTCCCAACAACGGAGGGAACGataacaaccacaacaacgtcGGCGTCGGCTACAAATTCCAACACATTTGGTCTGTTCCCAGAGCATTCATTTGCGAACACAACAACATTGGGGCAAGAGCCAAATGCGGTACCCTCATCCACAACATCCACGTCGAATCATAATACAAGCATGTTTGGAGATATGCAGGATTTTATTGACAACACCGATGTGGCTGCTATATGCACCATACCCGCAGATGATATGCCCGCTGTTGATGGCGATGATATTGTTATtgataacaataatataagCTTGGACTTTGATGCGGAAAACCTGTTTGAGGACTTTGAAGATGTAGAGGTGGGCGATGAGGATGATGACGACGAAGACGATGCCGAAAATGAAGACGAGAATGATAACAATGACGCGGCGGCCGATCAGAATCTGTTGCTCACCAGTGATGATGACGATGTGGATGACTTTGATGACGAACAATCGAAGCATCTGCAGAAACCCTATTGCATATATTGCAATAAGAAATTCACCAGCCAGTATAAGTTTGAGAATCACATGTTTGTGCATCGAGgCTTGGCACCCTATCGCTGTGAACTGTGCACCAATCTGTACAATATGAAACGTCTGCTTATTAGGCACTATAAGACGGTGCACAAACGGATGCCGACCCGGGATATGGTGCAGGCGAAGGGCGATAAGGTATTCGTGGCGCGTACAAGCATTGAAAAGATACAAGCTACTAATGACAAACCACCGATGGTAATGTGCGCCAAGTGTCCCTTTGAATGCGAACTGGAGACTGAAATGCGCAAGCATTTGAATGCGCATCATGGCATTAACGATGGAGTATCTGTGCATGCTAATGAAGTTTTTATCATACGCAAATTGCCCTATGAGTGCCCTCGCTGCATTCGGTCGTTTGCGGCTAAGCGGACGCTTACTCGCCATTTGCAGCGCAGTCATTTGGTGGACACAATCATTGAGATGCAGGCGCCTCAATTGACAACTAGCTCAGCGGCCACCACGACTACATCAACGGCAACGACCACATTGCCGCTGAACGCCAGTGATggcaataaaacaacaacaacggcaacaacatctGCACAACAACTGGATGGCAACATGTTGGCGCCGCAAGACGCTGACATAGATGTCGATGGtgatggggatggggatggaAAATGCGCCAATTCCAGCCATCTGCTTAACGGCAGCGATAAGCTATTGACTGCCGCGTTGGAGCCATCGCCAAATAAGGATTTGCGCACTCGCCTGCCGCGCACACCCATCTTTGTGTGCAAACAATGCAATCAGACTTTTGATGAGCTTAGCAAGTTGCTGCAGCACGAACTGGACCAACATTCCGGCGGCGTTGTATCGCCGCACAGCAGTTATCAGCATCAGTGCAAGATCTGCAAAACGACATACCGCACCGTCACGCTACTCAATTATCATATGAAACGGCATGCGCCGATGAAACTTCCGTGTACACGGTGTCGCAAAGAGTTTGAGGAGAGTACGGACTTGGAGCAGCACATACGGTCCGAGCATGCCGCCAATATGCCCCTGAAATGCGGCGTAGATGGCTGcccaaaaacatttaactacAAACATCATCTGAAGCGGCATCAGACAGCCTCGCATACTCCGGTGCAGTACATTTGTCCGGAGTGCGGACGCGATATGCTAACTAGTCTGCAGCTAAGGAATCACATGTCCATGCACAAGGGCACACACTCGTATAAGTGTCCCCGGTGTGTGCGTACTTATTTGCGTCGCAAGCCTTTCCGCAGACATGCGCTACGTGAGCACAAATGGGAGCTGACAGAGGAGGAAGTTGATACAATATATTGCGCTAATGATACATCGCCCACCATCAAATTGCGTGATCGAAGATCGGTTAAGGTTGAGAGTGATCAGTCTGACTAG
Protein Sequence: MAQKRVKTEDMAVNYKFACRCCLKSEAEFFKLDSLIECGIGDNDASTTKLPIIRLLLFCMRTENLPDLPQYICVECSKSLQIAYLFIQNGLRAHEILCRKLCPGQAKFPTRSNGQHALQVDTTMSRQNEFKGPRAAVRHECKVCGAIIYNRVELKQHIRMHTETTRHQCKLCNFVTLKHRQLPEHYRKAHGLTAAQIEHQLKIRRSMQAAANAIITPPAPPVTDADDEQVKVCTLEDMELLIPTVLTPEDFTHPQLDAEQLRDIEQQLSYSLPVSQPNSSTYNADGLPAEPTIATGDSANMSIGAEFLVMPDGSLQQVNDAGVVFEYIDDSKSTNATSNMTLQSLLGDSKTDLTYDAMDIDLSHMVVDNALPQITVKPKPRPAPASTGALKHKCKLCPKAFPTVARLKSHQLTHSHLPKFYCDQCAYYSLRSADLIQHYTMEHKSCISESRINHFEKLPGDRGRIYSCDLCLFETPSSGQLRVHYSNKHLVVPSEVQLRPTWTHESREGRGSSTTGGNGSAQPDIPLGIKYPPIMAAATAEPTAASTTDMDQSGQATTTTVVTPGGEINVVVDATSLFYAAGAADQFPTTEGTITTTTTSASATNSNTFGLFPEHSFANTTTLGQEPNAVPSSTTSTSNHNTSMFGDMQDFIDNTDVAAICTIPADDMPAVDGDDIVIDNNNISLDFDAENLFEDFEDVEVGDEDDDDEDDAENEDENDNNDAAADQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVFVARTSIEKIQATNDKPPMVMCAKCPFECELETEMRKHLNAHHGINDGVSVHANEVFIIRKLPYECPRCIRSFAAKRTLTRHLQRSHLVDTIIEMQAPQLTTSSAATTTTSTATTTLPLNASDGNKTTTTATTSAQQLDGNMLAPQDADIDVDGDGDGDGKCANSSHLLNGSDKLLTAALEPSPNKDLRTRLPRTPIFVCKQCNQTFDELSKLLQHELDQHSGGVVSPHSSYQHQCKICKTTYRTVTLLNYHMKRHAPMKLPCTRCRKEFEESTDLEQHIRSEHAANMPLKCGVDGCPKTFNYKHHLKRHQTASHTPVQYICPECGRDMLTSLQLRNHMSMHKGTHSYKCPRCVRTYLRRKPFRRHALREHKWELTEEEVDTIYCANDTSPTIKLRDRRSVKVESDQSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -