Dlac011556.1
Basic Information
- Insect
- Drosophila lacertosa
- Gene Symbol
- -
- Assembly
- GCA_004143845.1
- Location
- SCDZ01000035.1:512989-519514[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.041 4.2 8.2 0.3 1 23 1115 1138 1115 1138 0.94 2 13 5.1 5.3e+02 1.6 0.2 1 23 1250 1272 1250 1272 0.91 3 13 0.00011 0.012 16.3 2.7 2 23 1275 1296 1275 1296 0.97 4 13 4.4e-05 0.0046 17.6 0.2 3 23 1304 1324 1302 1324 0.98 5 13 3.7e-07 3.8e-05 24.1 4.1 2 23 1331 1352 1330 1352 0.97 6 13 3.3 3.4e+02 2.2 0.4 5 23 1365 1383 1362 1383 0.95 7 13 0.86 90 4.1 5.4 3 23 1390 1411 1388 1411 0.93 8 13 0.092 9.6 7.1 0.2 2 23 1422 1442 1421 1442 0.96 9 13 3.5e-05 0.0037 17.9 0.4 1 19 1448 1466 1448 1470 0.95 10 13 1e-05 0.001 19.6 0.5 1 23 1478 1500 1478 1500 0.98 11 13 6.6e-05 0.0069 17.0 7.6 1 23 1506 1528 1506 1529 0.96 12 13 0.00013 0.013 16.1 5.9 1 23 1534 1556 1534 1556 0.98 13 13 0.018 1.9 9.3 8.2 1 23 1562 1584 1562 1585 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAGTGTACAGTGTCCCGTGTGCACCCTGTATCTGCATGCGGGTATGAATCTCTCCGATCACTTGGAGACTCATCCCAAGGAGCAGGTCATCAAGGCGCTGGTGCAAATGACTATCATTGGCAACAATGGCATGGACAGCGCCCTGGCGGCAGCTGTGCTCTCCAGCAGTGCTGCAACATCAGATGCGGGCGCCCCCtcctcctcatcatcatcaaTTAAAAGCGCGCCACCCACGACTGAGGCGCCAGCCACCACATCCAATACACCCACCACAAGCAGCGTGGCCGCCGTCTATACCGACTATCGCTATGAACagcagccccagccccagccccaacagcagcagcagcatcatggCTTTGCACGTGGCGCTGCCACGCTCGTTATACCACAggcaccgcagcagcagcagcagcagcatcagttcCTGGCCAGTCAACAGCAGTCTGCGCACTTTActcaccatcagcagcagcagcagcaaccggcCATGAAGTACACCTATGCCACAGCcctgccaccgccgccgccgcccccgCTGCAGCTCTTTGCACAGCAGGCGACGTCAACGCAGTCGCATCAGAAGCCACCACCCGCCTATGGCGCCGCCATCACACCACCGAGTGACAAACATAGCAAAGTCCATACGGAGATATTTCTAAATCCACCGCCTCCACCACCGCTACAGCTCACGATTCCGTCAACGTCAACAGCCTCAACAAGACTGCAACacccacaacagcaacagcagcaacaacaacaatcccttgctgcaggcagcagcagcagcagcagcaacaacaacaactatgttGTAGCTACCTGCGCCAGCTCCTGGTCGGCTCTGATGTCATCAACGTCAGCCGCACGTGTCAGCAGCAGTCGCCAGTCGAACAATTCGCCATTTGGTGCACTGCTGAACGCAGCGGCGCAAGCTGCCTGCGCCTCGCCCGCCTCCTCAAGTGCGGCTTCGGTGTTGCGTTACGCCGAGTCGCCTGTGGCGCACTATCTGGAGCGTGAGAATGGCGACTTCATAGTCCAGGAGACGCCCAAGCATATTGTCGAGTGTGTGGAGAAGGATGATGGCGAGTTCTCTGTGATTGAGCGTATCTATCAGTCGCCGCCCAGCGTGCTGCACAtacacgacgacgacgaggatgacgacgacgacgacgaagaggaggaggaggacgaaGATAAGGGctggGCACACAGCGATGATGAGGATCACGTTAAACTGGCGCACGAGCATGTCGAGGATGGTGACGACGAGCAGGAGGATAGCCACAGTAGAGCTGGCCCGAAGACCACATCGAAAAAGTCGCGCAAGGCAAAACCGAGCGGCAGAAAGCACAAACGTGCTGCAGCCAAGCACCAGCCAGAGGACGAGGACGACTTCATGAGCATAGGCAGCAGTTGTGCCGAGAGCGATCATCAGCTGGAGGAGCCGCAGCCGACTCAGTCGCATTCGCAGCAATCGCATGCGGCACCAGCTGCACCCGCCGCCAGCTTAACGCCCAGCGGCTCTATCAAGTCCAAGAAGAACCGCGTAACGGTGCTGAGCGATGTGCCGCTGAACATGAACGAGTATCTGGATCTGGTGGGCAATATTGTGGCATCCAGTCGCATTGGTGCGTCACGTCCGTTTGCCGCGGTGGCGCCCATACCCTTGGTCAAGGTGGAGAAGGAGGAGCCCATGGACGACTACGACGCCGTACGGGTTGAGATGCAGTCCATGGAGGAGGAAAAGCCCAGCCTGGAACATGccactggcagcagcagcaacagcagcagcggccacgGCACCACCAGCGTGATACGCAtggccagcaccagcagcggcacAAACGTGGCTGCCGAGGATTTGACGCAGCCGCCGCCCATGAAGGTGGAGGTCGAGGCAACGGTGCTGATGCCGCAGCGCTTCTCGACGCCTGCGCAACAGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGccacagcgacgacgacggcgacggcaacgacgAAAAAGActgagaacaacaacagcgccgaAAGCAGCCCCAGCATATCAAAGGCTTCCACAGAGCTGGTGCAGATCAAGAGCGAGAACGTGGACGCAGCGGCCacagccagcggcagcagcagcagcattctGGAGAAGCATCTGACCACCAGCTTTGCGGCACAGCAGGCGGCGCGCAAACACTCCGCGGTCAACGATGACGATGCACGCGTGCTGCTCGAATTTGCCAACTcaaagcagctgccgctggccggcaacagcaaccagaCCACGTTTGTGGTGAATGCGGCCAGTTTTGCGTCAGCGGGCTCCGTTTTtgctagcagcagcagcggcgttggcggcggcggcaatgcTCCGAAGTCGAGCAAGCCGGGCGATGAGTACATTCTGCCTGATGATAACAATCTGGAGcagcaacagcagctgcaacatccGCACCACGGTTCCAGCGAAGCCACTAATGCCGCCACGCTGGCCTCCTCCTCCAGCAATTCATCCGCACTGGATCAGGACTGCTCAATGAATGCCACGTTTCGCGTGGCCAAGCAGCAAAGCACGCTGGGCGCCTGGTAtcaatcgcagcagcagcagcaccaccatcagcaccaccaccacaaccacCACCAGCAAGCGCAGCCAAGCAACTCCAGCGTGGAGCAGTCAAGCAACTTTATTGCCGCCCTTGCGGCCGTCGACTGCTGCAGCGTGGCGGCTGCTGACAGCGATGCCAAGTACTTGGATCTGGATGCCTGTAAGCGGGAGCAgctgagcaacagcagcagccacttgCCCTCGGCGTCCACCACGTCCTCATCGTTTGCCGCTGCGCCCACGGAGAGCAGTCTGGTGGGTGGCTTGGGTCTGAATATACGCACCGACGAGAAGATGCCCGCCAAAGGTGAAATCTCCGAGCAGGAAAGCAACTGTGACATTGAGAACTCCTGGAGTCAATCGATGTATGGCGACATATCACAGCGTTACTTTAGGGGCCAATTTAGCGACGGTTACAATCAGCAGCTGGCCGATTGGCGGCACGACTACTATCCGGCCCAGGATCTcagtggccagcagcagccacagcgtGAACCAAAGCGCTTTGATTTCAATGCGGTCGCCGCGGAGTACGCTCAGCCGGGCGATCTGGACGCCACGTCGAGCTCGACGCGAAACAATCATTTGTTGGACGCACAGCCCACCacatcctcgtcgtcgtcggcttTGCTGGCTGGCCCACCAATAGCCTCGACATCCCGTGCAGCCGCCGAGGCGGAGGCCGTGGCTGCGGCGCTGGCGCAACGGAAGCCACCGCGTCGCAAGATCTACAAGTGTCCGCACTGCGCGGCCATCTTCGAGAAGCTGAAGGAGCGCAATGCGCACATGATTGACGAGCACAGTTATGATGGCATTGTGAAGATCAAGCAGGAGCACTGTCAGGACAAACAGGAGGCGACGGAACAGCTGCTCGGCCAAATGGAGTTGCCCGACGTTAAGGATACGGGCCTGCTCGCCGCCAGCGATGACAACGGTCGCGACGCGGACATGAAGCCGCCCACCAGCGTCACCGATCTGGACGAGAAGCCCACCATACCGTCGTTGGCCATGACGACGCCCGCCGCCAAACTGGCCGCCCTCTATCGCATGCTTATTGCCTACAACGAGTCGAAGCTGGGCCAGGAGCGCAATAATCTCAGCGAGCTAGAGCAGAAGGCCATGGAGAAGTCGATATTCCTGTGCTATGTGTGTCGCACCGATTTCCCCTCGGTGAAGCTTTACGATGCGCATTTGACGGAGCATCCCGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTCTCGCTGCATCTGAAACGCCATCTAGGCTGGAAGGAGTTCGGCTGCTATGTGTGCGACAAGAAGTTTGTGGTGCGCAGCGCCCTCGTGGAGCACATGCGCATGCACACGGGCCAGACGCCGCTCAAGTGCAAGATTTGCGGTAAGAAGTTCAAGCGCTATTCCAACTTGACGCAGCATCGCAAGCGCCACACCAAGATGATGGTGCGCAAGAAGGAGTATGTCTGTCACTGCGGCGAAGTGCTGCCATCGAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGACTTGAAGCCCAAGTGCTGTCCTTATTGCTGCGATCGTTTTGTGCATGCAAACTCGCTGCGGCGACACATACGGCTGGCCCACTCGGACAAGTTCGACTACGCCGAGCCCATGGAGTGTCCCATGTGCAAACAGATCTTCGCCAAGACTTCGATCAAGGCGCACATGGCGACGCACTCGACAGATCCGCAATACGACTGCGCCATTTGCAACAAGAGCTTTTCCACCAAGTGGAATCTCAAGATACATTCGTGGGTGCACGCGAATCGCACGGCCAAACCTTTCAAGTGCGAGTACTGCCCCAAGGCGTTTGTGCGCGAGCTGGACTTCAAGAATCACATGAACGCGCACAAACAGATCAAGCCGTACACCTGCGAGTATTGCGGCTGCAAGTTTATTCGCAAGTACAACTATATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGTCTTTCCATCGCCACTACTATCTGATCGAGCATCGGCGCATACACACGGGCGAGCGGCCATTCCACTGCACCATCTGTGGCAAGAGCTCGACCACGAAGACCAATCACAACAAGCATCTGAAGATACATCATTCGCGCGATCCCTTCACTGTGGAggtttaa
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIIGNNGMDSALAAAVLSSSAATSDAGAPSSSSSSIKSAPPTTEAPATTSNTPTTSSVAAVYTDYRYEQQPQPQPQQQQQHHGFARGAATLVIPQAPQQQQQQHQFLASQQQSAHFTHHQQQQQQPAMKYTYATALPPPPPPPLQLFAQQATSTQSHQKPPPAYGAAITPPSDKHSKVHTEIFLNPPPPPPLQLTIPSTSTASTRLQHPQQQQQQQQQSLAAGSSSSSSNNNNYVVATCASSWSALMSSTSAARVSSSRQSNNSPFGALLNAAAQAACASPASSSAASVLRYAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEDDDDDDEEEEEDEDKGWAHSDDEDHVKLAHEHVEDGDDEQEDSHSRAGPKTTSKKSRKAKPSGRKHKRAAAKHQPEDEDDFMSIGSSCAESDHQLEEPQPTQSHSQQSHAAPAAPAASLTPSGSIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGASRPFAAVAPIPLVKVEKEEPMDDYDAVRVEMQSMEEEKPSLEHATGSSSNSSSGHGTTSVIRMASTSSGTNVAAEDLTQPPPMKVEVEATVLMPQRFSTPAQQRGPKKLVIKPKATATTTATATTKKTENNNSAESSPSISKASTELVQIKSENVDAAATASGSSSSILEKHLTTSFAAQQAARKHSAVNDDDARVLLEFANSKQLPLAGNSNQTTFVVNAASFASAGSVFASSSSGVGGGGNAPKSSKPGDEYILPDDNNLEQQQQLQHPHHGSSEATNAATLASSSSNSSALDQDCSMNATFRVAKQQSTLGAWYQSQQQQHHHQHHHHNHHQQAQPSNSSVEQSSNFIAALAAVDCCSVAAADSDAKYLDLDACKREQLSNSSSHLPSASTTSSSFAAAPTESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRGQFSDGYNQQLADWRHDYYPAQDLSGQQQPQREPKRFDFNAVAAEYAQPGDLDATSSSTRNNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCAAIFEKLKERNAHMIDEHSYDGIVKIKQEHCQDKQEATEQLLGQMELPDVKDTGLLAASDDNGRDADMKPPTSVTDLDEKPTIPSLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -