Basic Information

Insect: Drosophila lacertosa
Gene Symbol: -
Assembly: GCA_004143845.1
Location: SCDZ01000078.1:216555-218433[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.1e-06 0.00042 20.8 0.2 1 23 248 271 248 271 0.97

2 8 8.6e-07 9e-05 22.9 1.6 3 23 284 304 282 304 0.96

3 8 7e-05 0.0073 16.9 0.2 1 23 313 336 313 336 0.94

4 8 0.025 2.6 8.9 0.3 3 23 346 366 344 366 0.96

5 8 0.00016 0.017 15.8 7.1 1 23 372 394 372 394 0.98

6 8 0.00015 0.016 15.9 0.1 1 23 399 421 399 421 0.98

7 8 1.4e-06 0.00014 22.3 1.7 1 23 427 449 427 449 0.97

8 8 0.028 2.9 8.8 3.8 1 23 455 478 455 478 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.1e-06	0.00042	20.8	0.2	1	23	248	271	248	271	0.97
2	8	8.6e-07	9e-05	22.9	1.6	3	23	284	304	282	304	0.96
3	8	7e-05	0.0073	16.9	0.2	1	23	313	336	313	336	0.94
4	8	0.025	2.6	8.9	0.3	3	23	346	366	344	366	0.96
5	8	0.00016	0.017	15.8	7.1	1	23	372	394	372	394	0.98
6	8	0.00015	0.016	15.9	0.1	1	23	399	421	399	421	0.98
7	8	1.4e-06	0.00014	22.3	1.7	1	23	427	449	427	449	0.97
8	8	0.028	2.9	8.8	3.8	1	23	455	478	455	478	0.97

Sequence Information

Coding Sequence: ATGGCTGCACAAACAAAGGCCACACAAGGCTTCGAGCTTGAGCATACCGAATCCAATTGGCATATGTGGTGTCGCCTCTGCGCCAAGGCGGATCTCGAGGGCAACATAAATGTGTTCCTGAAGAACGAGCAGTCGGCGCCCGCGGGCAATGGCACTGCCGAGGCTGTCGGCGACCTGGCGCTGGCCACAGCAATTGGCAAATACTTCTGGGTGAATATAACACGCGGCGAGGAGCTGCCTGAGGTGATATGCAGTGAGTGCCTGACGCTGGTCACCTCGCTAGTGAACTTCTCGGAGCGCATAACCCGTGTGCAGAAGCTCTACTGCATTCTGCAGAGCACGCCCACGGAGGCAATTAATGTGCAGGAGCTGCGTGCGAGATTTGGCCTGGTGGAGGAGGCGTTGACCGAGGTGCACTACGTGGAGGAGAAGCCCAAACTGAATGAGCTCGAGGAATCGGCGTTGGAGTTGGAAAATCCGCTCACGCCCAACGAGGCAAATAAAACGCAGCTCGCGGCTGAAGATGACGATGCGAATGCAGACGATGGAGAGGTGGAGGCGCAGtcggagcaacagcagctggagaaGGAAGAGCACCAGCCGGATTACGAAGAAACAGGCGCGGAGCTGCTGTTGAATCTGTGCGAGGCGCTCAGCACCGACGATgtcgacagcagcagctctgcGGCCAGTGCCAAGCCAGCCCGGCCGAAACAGAGCAAAACCGGCGCGGCCAAGTCATTTCAGTGCAGCGAATGTCCGCGCGTCTATGCGCTGCCGCAAACGCTGCAGCGGCACATGCGCCAGGATCACGACAAGAGCGAGCCCGATCCCAGCCAGCTGCTGGCGTGCGAGCAGTGCGAGAAGCGCTTTCGCTCGCGCTACCAGCTGCAGCGGCacatgcagcagcatctgCCGATGCCGAAGCGCAAGCGCTATCCGTGCCCCAGCTGTGGCAAGAAGTTCACGACCAGCGCCTCCGCCCAGTCGCACGCCCAGTACATGCACCAGGAGGAACGACCGCGCCCGGTCATCTGCGAGCAGTGCGGCGTTGCGGTGCACTCGCTGCACGCGCTCAAGGAGCACCTGCTCAGCCACACGGACTACGCGCCCTTCGAGTGCGACGTGTGCAAGAAGTGCTTCAAGAGCCTCAGCCGGCTAAAGCATCACAAGGAGACGCACGATCCGCACAAGTACATCTGTCCCGAGTGCGGCATGCAGCTGAACTCGCGCCCGACGCTCAACCGGCATCGGCTGGTGCACACGGATCAGATGCAGCACAAGTGCGACTACTGCGGACGGGAGTTCAAGCGAGCGAAGGCGCTCAAGAACCATTTGATCCTGCACACGGGCCTGAAGCCGTACTCCTGTGACTTCTGCGAGCGCACTTTTGCCAACGGCTCCAACTGTCGCACGCACAAGAAGAAGGCGCATCCCGAGGAGCTGGCCGCCCAGGAGGCGGCCGGCGGCGCCAAGACCTACAACCGCAATATTCCCAAGCTGGAGGCGCTCAAAGCATTCACCAAGAACAAGGACAACCTGTCGCCGGTGGCCACCAAGCAGAGCGGCTGCTTCGCCTTTGGCAAGAAGCCGAAGGCGCCGTTGAAGGTGGATGCCGCCAGTCCAGCGAATCCTGCCGCCTCCATACCCACCATAGACAACATTTACCAGCACATCATGAAGCCCGAGGAggcgcaacagctgctgctacCGGAGGAGCAGGCGGAGACGAGTGCCACACAGATCTACAATTATTAG
Protein Sequence: MAAQTKATQGFELEHTESNWHMWCRLCAKADLEGNINVFLKNEQSAPAGNGTAEAVGDLALATAIGKYFWVNITRGEELPEVICSECLTLVTSLVNFSERITRVQKLYCILQSTPTEAINVQELRARFGLVEEALTEVHYVEEKPKLNELEESALELENPLTPNEANKTQLAAEDDDANADDGEVEAQSEQQQLEKEEHQPDYEETGAELLLNLCEALSTDDVDSSSSAASAKPARPKQSKTGAAKSFQCSECPRVYALPQTLQRHMRQDHDKSEPDPSQLLACEQCEKRFRSRYQLQRHMQQHLPMPKRKRYPCPSCGKKFTTSASAQSHAQYMHQEERPRPVICEQCGVAVHSLHALKEHLLSHTDYAPFECDVCKKCFKSLSRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCERTFANGSNCRTHKKKAHPEELAAQEAAGGAKTYNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKAPLKVDAASPANPAASIPTIDNIYQHIMKPEEAQQLLLPEEQAETSATQIYNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00598348;
90% Identity: -
80% Identity: -