Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_004143845.1
Location
SCDZ01000155.1:64439-66140[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.6 9.2e+03 -2.9 0.2 6 18 28 39 25 44 0.56
2 3 1.5e-07 0.00021 21.5 0.0 4 38 307 344 304 345 0.86
3 3 1e-08 1.4e-05 25.3 0.3 3 43 400 445 398 447 0.85

Sequence Information

Coding Sequence
ATGGATCTGCACACCAAAACAACACTGCCAGCAATAATACTGGGCCTGCTGTTAATATGCGGCTCGGCTAGCGCTTGGCATTCCGAAGAGCTGGAGATTTTCGATTTGGTCGAAGAGATTAACAAAAACTTCTACGAGTTTATGGGCATCAACCAGACTGCCACGAATTTTGAAATAAAGAAAGCCTTTCGCACCCTCTCCATTGTGCTACATCCCGACAAGAACCCTTCCGAGGATGCCAACATCCAGTTTCGCAACCTGGTGTCCATCTACGAGGTGCTCAAGGATGCCTCCAAGCGCGAGAAATATGATAAAGTGCTCCGCGACGGCATGCCCAACTGGAAGTCGGCCCTTTACTACTATCGCCGCATGCGCAAGATTGGCCTTTACGAGGGCGCCTTCATTCTGTTCCTGATCATCACCGTGGGCCAGTACTTGTTTGCCTGGGCCGCATACCTGGAAAAGAAGTACACGGCCGAGCAGGTGTTCGGCACCAAGCTAAAAAAGTTGCAGaaacgcaacaaaaacatcGACATGGACGTCATTCTTAACGAGATACCTATGCCCTCCTTGCTAAATACACTGCCAATTCAAATACCTCTGGCGATTTGGCATCTGCCGAAGACCATCAAAAGTGGCTTCAGCAAGGCCAACGAACTTAAGCAGCTGGCTCTGGAAAAGCGCAGACAGGAGATCGAGGCTGCACGTCGTCAGGAGGAACTAGAGCGTGAGGCGGAAGAGCAGGTGCGTCTGCGTAAGGAGCACAAAGAGAATTTACGCAAGCGCAAGCAGAACACCAAGGCACCGGAAAAGACCGAAGAGGAGCTACGCGGATACTCGCAAATCCAGGCACGCGAGCTTACCGAAGAAGACGCAACTCGTCCTGCTTCCCAAAAGAGTACCGTTAGTGGCGGCTTTTGGACCGACGAGGATCTGACGGAACTTATAAGGCTTGTGAAGAAATATCCTGGCGGTGCCGGTAGTCGCTGGAACACCATCGCCGAGTCCATGAACCGGAGCGTGCAGGAGGTCACCTTCATGGCGGCCAAGATGAAGGAGAACGGATATCGCATACCAGGCCAGTCGGAAAGCGTTGCGGAGAATTTAGTGCAGGAGTCACAGGAAGCGGTACGCAAGGAGAAGGTCAAAAAGGGTAGCACAGCGGCCAGCGAGAAGAGCATGCTCATACCAGAGACCAACTGGACCCAGGAGCAGCAACGTGCTCTGGAGGCGGCCATTGTTAAATACAGGAAAACCGCAAGCGGTGATCGTTGGCAAAAGATTGCCAACAGTGTGCCCGAAAAGACTAAGGAGGAGTGTCTGGTGCGCTACAAATACTTGTGCGAGCTGGTAAAGACACAAAAGAAggccgaggaggaggagaccgAGCCCGTTACCatcgaggaggaggaagaggcTGCTGTGCCTGACGAAGGCCCAACTGCTGCAGTTgtagctgccgctgctgctgttgcggttgCTACAGTACCACCCAAAAAGCTAAGCAAACGCGAGCAGCGTCGTCGCAAACGCGATTTGTCCAGCGACGAGGATTCTGATGACGCATATCAGTACGAGCTCAGTTAG
Protein Sequence
MDLHTKTTLPAIILGLLLICGSASAWHSEELEIFDLVEEINKNFYEFMGINQTATNFEIKKAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILNEIPMPSLLNTLPIQIPLAIWHLPKTIKSGFSKANELKQLALEKRRQEIEAARRQEELEREAEEQVRLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQARELTEEDATRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQSESVAENLVQESQEAVRKEKVKKGSTAASEKSMLIPETNWTQEQQRALEAAIVKYRKTASGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEEETEPVTIEEEEEAAVPDEGPTAAVVAAAAAVAVATVPPKKLSKREQRRRKRDLSSDEDSDDAYQYELS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2