Dlac012419.1
Basic Information
- Insect
- Drosophila lacertosa
- Gene Symbol
- bab1
- Assembly
- GCA_004143845.1
- Location
- SCDZ01000160.1:246002-248542[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-18 1.1e-14 54.0 0.0 1 43 55 98 55 100 0.95 2 2 0.61 1.8e+03 -1.1 0.5 11 21 221 231 219 243 0.76
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCACGCTTGGATGGGCGCAACTGGTTCAACGCTTGCAGCAGACAGCTATCAATATCAACTGCAGTCAATGTGGCAAAAATGCTGGAACACCAATCAGAATCTAATGCATCACATGCGTTTTCGCGAACGCGGACCGCTAAAATCGTGGCGACCCGAAACGATGGCCGAGGCCATTTTCAGCGTGCTCAAGGAGGGCCTCTCGCTGTCGCAGGCAGCGCGCAAATACGATATACCCTATCCGACGTTTGTACTCTACGCGAACCGGGTGCACAACATGCTGGGACCCTCGATCGATGGCGGCCCCGATTTGCGGCCTAAAGGACGCGGCAGGCCTCAGCGCATCCTGCTTGGCATTTGGCCGGACGAGCACATCAAGGGCGTGATCAAGACGGTCGTGTTTCGCGACACCAAGGACTTGAAGGACGACAGCTTAGGCGCCCACCTACCGCCGTACGGTCGGCATTCGCCCGTGTTTCCCTTGCAGGACATGTCGCTCAGCTACCCAGGCGCTAGTGGCGGCATGCCGGGCAGCGGCGCCGCCAGCCTCAGCGCCCTGGCCTGTCCCAACGGCATGGGCAGCGGCGGTGGAGGCGGCGTGGGAGGCGTTGGAGGAGCTGCGAGCGGTgtcggcggcggtggcgccgCTTCTGTGGCCGAGCAGCAAATGTCGCAGGAACAGATGTCGGCGGTGGCCGCCGTGGCGCACAACATCAGGCAGCAGATGCAAATGGCCGCCGCAGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGGCGGGGCTGTTCAATTTACCGCCGCACCTAGCGGGCGTGCCGGGCCGCGCCAGCATCTCGCCGGCGCTGAGCAGCGGCTCAAATCCATCGCTCGGCCCGCGGCACGCGCCCTCGCCCTGCGCTCCAAGTCCAAGCCTCAACTCAAGctaa
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDLKDDSLGAHLPPYGRHSPVFPLQDMSLSYPGASGGMPGSGAASLSALACPNGMGSGGGGGVGGVGGAASGVGGGGAASVAEQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPAGLFNLPPHLAGVPGRASISPALSSGSNPSLGPRHAPSPCAPSPSLNSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -