Dlac012415.1
Basic Information
- Insect
- Drosophila lacertosa
- Gene Symbol
- bab2
- Assembly
- GCA_004143845.1
- Location
- SCDZ01000160.1:105376-107852[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 1.1e-14 54.1 0.0 1 43 59 102 59 104 0.95 2 2 1 3.1e+03 -1.8 0.1 29 42 326 340 326 341 0.89
Sequence Information
- Coding Sequence
- ATGATTGAGACGAGCGGACATGGCTGGATGGGCGCACCGGCAACAGGCGCTTCTGTGGCGGCAGACAGCTACCAATATCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAACCAACAGAATCTGGTGCAACAGCTGCGCTTCCGCGAACGCGGTCCCCTCAAGTCCTGGCGCCCCGAGGCCATGGCCGAGGCCATATTTAGCGTCCTTAAGGAGGGCCTATCGCTGTCGCAGGCCGCTCGCAAGTACGATATACCCTATCCGACATTTGTGCTGTATGCCAACAGGGTGCACAATATGCTGGGACCCTCGCTGGATGGCGGCACCGATCCGCGGCCCAAGGCACGCGGCCGTCCACAGCGCATCCTCCTGGGCATGTGGCCCGAGGAGCTCATTCGCAGCGTCATCAAGGCCGTCGTCTTTCGCGACTATCGCGAGATCAAGGAGGACATCAGCGCCCATCAGTACGCCAATGGACAGGCACATGGCGCTCACTATGGCAACTCGGCCAATGGATATCACAGCGCTGCTCGCTCGGAGATCGAGGATCAGgtgtcggcggcggcggcggtcgCGGCGGCGGCCAAGCATCAGCAGAGCGAGCGTCGCGGCGCCGAGAATCTGCCGGATCTGAGCGCGCTGGGGCTGATGGGTCTGCCGGGGCTGAATGTGCAGCAGGCgtcgcatcagcagcaggcgtcgcatcagcagcaggcggcgcaTCAGCAGTCAGCGCATCAGCGCGGGGCGcccggcaacggcggcagcgccGGCTCGGCCATGCATCCGAGCGCGGCCAGCTATGCGCGCGAATTGTCGCGCGAGCGGGAAAGAGAGCGCGAGATGACGCGCGATCGCGAGCTGAAGGAGGCGATGCACGCTCGCCAATATGGGAATCAGTCGCGCGGCTCGAATTCATCGGGCGGCAGCAAGTCAGCGGCGGCCTCGTCCAGTCGACCGGGCGCCGCCTCGCCCTACTCGACGCACTATGCGAAGCACGCCAAGGAGCATCCGGGCTATGCGTATAATAAGCGCTTCTTGGAGAGTTTGCCGGCGGGCATTGACTTTGAGGCGATTGCGAATGGGCTGCTGCAGAAGTCGGTCAATAAGAGTCCGCGCTTCGAGGACTTCTTTCCGGGCCAGGATATGAGCGAGCTCTTTGCCAGCGCCGAGGCGGGCgctggcgtcggcgtcggcgccggcgccgcagcagcagcagcagcagccgccgcggcCGCCGCTTACGCACCGCCGGGCGTACGAGAATCGCCGCTGATGAAGATCAagctcgagcagcagcaggcggccgAGTTGCCGCATGAGGATTGA
- Protein Sequence
- MIETSGHGWMGAPATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDISAHQYANGQAHGAHYGNSANGYHSAARSEIEDQVSAAAAVAAAAKHQQSERRGAENLPDLSALGLMGLPGLNVQQASHQQQASHQQQAAHQQSAHQRGAPGNGGSAGSAMHPSAASYARELSREREREREMTRDRELKEAMHARQYGNQSRGSNSSGGSKSAAASSSRPGAASPYSTHYAKHAKEHPGYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFASAEAGAGVGVGAGAAAAAAAAAAAAAYAPPGVRESPLMKIKLEQQQAAELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -