Basic Information

Gene Symbol
kn
Assembly
GCA_004143845.1
Location
SCDZ01000466.1:5061-8386[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-119 1.1e-115 387.4 0.0 205 384 1 209 1 213 0.99
2 2 3.7e-07 0.0039 15.8 14.9 424 518 216 309 209 331 0.55

Sequence Information

Coding Sequence
ATGCGAAGATTTCAGGTCGTCATCTCCACCCAAGTGGCCGTTGATGGACCACTGCTGGCGATCTCGGACAACATGTTCGTGCACAACAATTCGAAGCACGGACGCCGCGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGACTCTACCCACCGCTGCCAGTGGCGACGCCCTGCATTAAAGCGATATCGCCCAGCGAGGGCTGGACAACAGGTGGCGCCACCGTGATCATTGTGGGCGACAACTTCTTTGATGGCCTGCAAGTGGTATTTGGCACAATGCTCGTGTGGAGCGAGCTAATCACATCGCACGCGATACGCGTCCAGACGCCGCCACGGCACATTCCCGGCGTGGTCGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGGTCGCCCGGCCGCTTCGTCTATGTCTCAGCACTCAATGAACCCACAATCGACTACGGCTTCCAGCGCCTACAAAAGCTGATACCCCGGCATCCCGGCGATCCCGAGAAGCTGCAAAAGGAAATCATTCTCAAGCGCGCGGCGGATCTTGTCGAAGCGCTCTACTCCATGCCCAGCAGATCGCCCGGCGGCTCCACCAGCTTCAACTCGTACGCAGGCCAGCTGGCGGTGAGTGTGCAGGACGGCACAGGACAGTGGACCGAAGACGATTACCAGCGCGCCCAGTCGAGCAGCGTCAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCGACGCCACACAGCTCGGGCGGCTCCTACGGCGCCACGGCGaccaccgccgccgtcgcGGCCACTGCAAACGGATACGCGCCCGCCCCGAACATGGGCACGCTGTCCTCGTCGCCGGGCAGCGTGTTCAACTCAACGTCAATGTCCGTGTCGTCGCCTTGGCATTCGGCGCTCGTCCAGCATCATCACGTGGCCGCCACCGCCCATCCCCATCACTATCCGCATCCGCACCAGCCCTGGCACAATCCGGCCGCCtcagcggcgacggcggcggccgTTTAA
Protein Sequence
MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSVSSPWHSALVQHHHVAATAHPHHYPHPHQPWHNPAASAATAAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00530692;
90% Identity
iTF_00359257;
80% Identity
-