Basic Information

Gene Symbol
osa
Assembly
GCA_004143845.1
Location
SCDZ01000576.1:28322-43289[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2 3.5e+03 -1.3 0.0 13 47 738 775 733 777 0.82
2 2 6.9e-25 2.1e-21 76.3 0.0 3 89 985 1071 983 1071 0.92

Sequence Information

Coding Sequence
atgaatgaaaaaataaaatcgccGTCAACGCAGTGTGGCGCTACCGGTGGGGCTGGTGGAAACGTGGTACCACCAGTGGCAGGGAGCACAGGTGGTGCTACACCACCTACATCAGTCCCGCCCACGCCAAACAATGGCAATGATCCTATTATACAACAGGGTGGCTCTGTACCTCATTCCTATGGCGGACCACCGTCTGGGGCTGTACCAGGTGCAACTCCAGATTCAGCAACAGCTATGTCACATTATCATCATatacatcaacaacaacagccacaaggTCCCCCACTACCAACACATATGCAGCACCACGGTGGACCACCGCCTCCGCAGGGACCAATACCGCTTCCACCTGAGCACACGCCTGGTGTGAAAGATGAATATGGttcagcacatttgccgccgCCACCCGGTGTTCAACACCCACATGCCCATCCCGCCTACGCGCGGTATCACTCGGGCGATCCCAACATGGATCCTTATCGTTATGGACATGCGGCCACACAGCAACCACCTCCTGGGAGCAAACCTCCgcaccagcaacagccacCACAAGGTGCTGGGGGCTCACCGAATCGACCCCCCCAACAGCGCTACATACCCGGTCAACCACCGCAGGGTCCAACACCAACATTGAATTCATTACTGCAATCGTCAAATCCGCCGCCACCACCCCAACACCGTTATGTCAATAACTACGATTCGCAGCAAGCTGCCAATGCTGCAGCAGTGGCcgcagcacagcagcagcagcatcaacaaaatGCTCAGCAACAACCAGGTGGTCCGCCGCCCCCACTACCAGGCCATGGGCCGCCGCCACCACAACACCAACCATACGGTGCACAACAGGGCGGGTGGGCACCACCACCAAGGCCCTACAGCCCACAATTAGGTCCATCGCAGCAGTATAGGACACCTCCACCGACAAATACTTCCAGAGGTCAATCACCATATCCGCCAGCTCACAGTCAAAACTCAGGTTCCTATCCTAGTtcgccccaacaacaacaacagactcaacagcaacaacaaactacaCAACAATCTGGTACACCCGGAGCGTCGGCGCCACCGCCCGTTccctcgcagcagcagcagcaaaacacaCCTCCTACATCTCAATATTCGCCGTACCCACAAAGATACCCAACACCACCAGGTTTGCCGACGACTGGGCCTAATCATCGAACTGCCTACACAACGCACCAGTATCCCGAACCAAATAGACCGTGGCCAGGCGGATCATCGCCTAGTCCTGGTCCTGGCCATCCATTGCCGCCCGCCTCACCGCATCATGCACCACTGCAACAACCGCCAGCGCCACATTCCTCTGGTGGTGGGCCACCACCTAGCAGCAGTCCAGGGCATGCACCAAGCCCATCGCCACAACCCTCACAGGCATCACCATCGCCACATCAGGAGCTGATTGGCCAAAATAGTAACGACAGTTCAAGTGGCGGGGCACATAGTGGTATGGGCTCAGGCCCACCGGGCACGCCTAACCCACAACAAGTCATGAGACCAACACCCTCGCCCACAGGTTCATCTGGTTCAAGATCTATGTCGCCTGCAGTGGCACAAAATCATCCAATCTCGCGTCCGGCAAGTAATCAGTCAAGTAGCGGCGGTCCAATGCAGCAATCAACAGTGGTTGCTGGTCCACCTCCTTTGCCACCACACAGTTTATCAGGTGGACCACCATCTCAACAACAATCTCAGCAGCAACTGGCATCAAATTCAACATCTTCAGCAAGTAATTCACCCCAGCAGACGCCACCACCAGCGCCGGCGCCAAATCAAAATGTTAACAACATGGTAACACCACCACCCCCGCCACAAGGAACTGCAGGTGGCTATCCCATCCCGCAGCATATACATGGCAGTTACAAAATGAGCTTACCAGGTCAAAGTCCTGGCGCTCAAGGATATCCAACGCAACAATATCCCCAAGgtaaCTATTCGCCCCGTCCTCAATATTCGTCGGGTGCCTACGGAACTGGACCACAACCGCCAACAACAAGTCAGCCCGGCGGGGGCACTAATACTATGCAATCTGGCGCACAAGCTGGCTACCCTCGATCTATGCCCAATCACGGAAGTGGCAGTCCTCATCCACAGTATCCACCATATCAATGGGTACCGCCTTCGCCTCAGCAATCTGTGCCTGGGACTGGATCGGGACAAATTGGCGCGGCTATGGGTAACCACGTGCAAGGCAAGGGCACACCACCACCAGTTGGACCACCACAGCCCCAAACCAGCGGTTCACCGCGCCCTCTTAACTATCTAAAGCAGCATTTACAACACAAAGGCGGTTATAGCGGCAGCCCAGCGGGTCCACAGCCACAGGGTTATGGCAACGGTCCAACTGGTATGCATCAGGCAATGCCTATGGGTCCACCACATCATATGGGTCCACCACAAAGCATGGGCCCACCAACAAGCACGCCGCCACAGTCTATGCTGGGTACACAGGCTAGTAGTGACAGTGGTGTGGAGCATATATCCCAAGACAATGGAATTAGTTCATCAGCCTCTTCGCCAGCCACATCACTGCATGCAGTTACCGCAGTAGTTACAACTGGACCAGATGGTACACCAATGGATGAAGTAAGCCAACAAAGTACGCTTTCAAATGCGTCGGCAGCATCAGGCGAAGATCCACAATGTACTACACCAAAGTCGCGTAAACTTGATCCATACAGCCAAAGTCATTTAGCGCCGCCGAGCACTTCGCCACATCCAGTTGTGATGCATGGTGGTGGTGGTCCGACTGGCGAGGATTATGAAATGAATTCGCCCCCTAATTGGCCGCGCCCAGCTGCTAGTTCGCAGGTATTCAACAGTCATGTTCCGGTTCAACAAGAACCTTTTCGTAGCACTATAACAACTACTAAAAAGTCGGATTCGCTTTGCAAGTTGTATGAGATGGATGACAATCCGGACAGACGGGGTTGGCTAGACAAACTGCGCGCTTTTATGGAGGAACGTCGTACACCAATTACGGCTTGCCCGACCATCTCAAAACAGCCACTCGATTTATATaggttatatatttatgtaaaagaaCGTGGCGGATTCGTCGAGGTATGCAAGGtgacaaaaagcaaaacttgGAAGGATATAGCCGGCTTACTGGGTATTGGAGCAAGCAGTAGTGCTGCATATACACTTCGTAAACATTATACAAAAAATCTGTTGGCATTCGAGTGTCATTTTGATCGCGGCGATATTGATCCATTACCCATTATTCAGCAAGTAGAAGCAGGCAGTaagaaaaagacaacaaaGGCTGCATCAGTCCCATCACCAGGGTCATCGAACTCTCAGGATTCTTTCCCTGTACCACCTGGAGGTGCACCGAACACAACAATTGATGGCTATTCAGGCTACTCTGGCGCTGGTGCATATCCACCATCTGCTGGTCCACAACCGGATTACACAGCAGCGAGCCAAATGCCAAGGCCGCCGTCTCAAAACAATCCACAGGCCCCTCATCCTGGCACTCAAAATCAAACAACTGCCACTGTTGCCGGCGATAACATAAATGTGAGCAATCCCTTCGATGATCCAATTGCTGGCGGTGTGGCCGCtggtggtgttgctgttgctgtagttggTGGTGCGTCACATGGTGCTCCTCCACCGCCCCCACATTCACCGCACACAGCGCCACAATCGGGCAatcaacaccaccaacaaGGCATTCCAACGCAaatgccgtcgccgtcgcagcaACCACCAGCTCCACCACCACAGCAACATGGGCCGCCGTCGACGCAGCATGCGCGCCCTGGAACTGGAGTACCTTATCCACAGGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGGTTCACCATATCCAACGCAGCCTGGGGCTTACGGTCAATATGGTTCAGGTGATCAGTATAATACCGCTGGCCCGCCTGGGCAACCGTTTGGACCAAGTCAAGGGCAATATCCACCCCAGAATCGGAATATGTATCCTCCGTATGGTCCTGAAGGGGAAGCCCCACCAGCTGGTGCTAATCAATATGGGCCCTATGGAAATCGACCATATAGTCAAGGACCACCCGGTGGCCCGCAACCACCAGTACAAGCCGTTACGGGTGGACCTCCATCCAGCGGAGCTCCAGTAGCACCACCAAATAGTGGTTATGCGCCAAACACTCCCAATCAACAGGATTACTATAGGCCACCAGATCAAAATCCTCAACCGCGACGACATCCTGACTTTATAAAAGATTCACAACCTTACCCAGGTTATGCAGCAAGGCCTCAAATTTATGgTGGTTGGCAAGGCGGTAATCCACAATATCGTCCTCAATATCCCACATCATCTGCGCCACAGTCCTGGGGAAATGCACCGCCCAGGAGTGCTCCTCCTGGAGGTCCACATGGCCCACTCGGTCCACAGCAGACAGGAGTAGCTCAGTGGGAACAACATCGTTACCCTCCTCAACAGCCTCCTCCAccaccgcagcaacaacagcctcCTTACCAGCAGAGTACGCAGCCAGgccaacaaccacaacaagcGGCACCACAGTGGGCGCAAATAAATGCAGTCCAAGCGCCGCCACAGACAAGTATTTCGCAACCGGTTTCTTCTGCTCTACGCCCGCCAGCTGGGATCGTACAGCAACAACGAATGCCCAGTGGAGTACCTGTTATGTcaccacaacagcagcaggggcAGGCGGTACCACAACCACCACATGGAGGTGTACCACCTTCAAGTATGCCGCCTGTGACTGGAGGTATGGTAAAGCCACCTTATGCTATGCCACCACCTTTGCAGTCTGCAGGGGTCTCACCTGGTGTGTCAATCGGTGGTAGTGCTCCGGCGTCCATGATCGCGCAAAAGCAGTCGCCTTTAATCGGACAGGGAATGCAGCctacgcagcagcagccgcctcaTCAGCTGCCGAATCAGCAAGCTGCATATGCCCCACAAATAGCTGGAGTAGGCGCACAATTGGTTAAAAAGGAGCTTATCTTTCCGCATGATAGCATAGAGTCAACGACACCAGTCATTTACCGTCGAAAACGTCTGACTAAGGTTGACGTATGCCCTGTTGATCCGTGGAGGATTTTTATGGCCATGCGATCGGGTCTGCTTACTGAGTGTACATGGGCATTAGATGTCCTAAATGTTCTTTTGTTTGACGATTCCACAGTTCAATTTTTTGGCATATCAAATTTACCGGGTCTGTTAACCTTGTTGTTGGAACACTTTCAAAAGAATCTCGCCGAAATGTTTGATGAACGCTGTGATGAAGCGACTGAGGACGCAGATGACGACGCTGACAGTGGCACCGTTATGTCATTGAAGGTTGAAGGACGAGAAACACGTTGTGTGCGCAGTATCTCTAGCTACAATCGTAGGAGACACTACGAAAATATGGATGTAAAGCGTGTTGTTCGCAGTGAAGACTCGGATGATGCTGATGAGGGCATTGATTTGGGTCAAGTACGTGTGCAGCCTAATCCCGAAGAGCGTTCGCTTTTACTTTCGTTTACGCCCAATTACACCATGATAACGCGAAAGGGAGTACCAGTCCGCATTCAAACGGCTGATCATGACATCTTTGTTGATGAGCGTCATAAAGCTTGGGATATTGACACTAATAAGTTGTATGAACAGCTCGAACCAGTAGGCAGTAATGCTTGGACTTATGGCTTCACGGAACCAGACCCGCTTGATGGGATAATTGATGTATTTAAGTCAGAAATTGTAAACATTCCATTCGCGCGATTTATACGCTCAAAGCACAGGAGCAAGCAGGAAATCGTACAGAAAAGCAACAATACCTTGAGGCCAGAAGACATTTCATCTGTTCTAAAACAGGAGGACACCACAAGTAGTACCGAAGATAGCAGTCTTCTTCAACAGACTTACAATAAAAAGAGGCGGCTTGTGAGCAATATTGGTACAGCTGGTAGCGACAAAAAGAAGTCTAAACTCGGCGTAGAATTTGCACAGCCCACTGTCGACATGAAGAAAGAGACAGACATCGAAATTGTCGGTTCCAATTTAACCGACAGTGATTGTCGTGCCATTGATATGGAAATAGAATCACCACAACAGCTACGTCTTACAAATGGAGTCACCTCGTTGCCCAAGGGCTTTGATCCGAAATCAACAGTACGCGATGATGCGCAAGTTCTACAACGACGTCGCGACTCAAGCTACGAAGACGAATGCTATACGCGGGACGAAGCCTCTTTGTACTTAGTAAATGAAAGTCAGGACTCATTAGCACGTCGCTGTATTGCGCTTTCGAATATATTTCGAAATTTGACTTTTGTGCCTGGAAATGAAACAGTGTTGGCTAAATCGACGCGATTTTTAGCTGTGCTCGGTCGCCTATTCTTGCTAAACCACGACCACTTGCGGCGCACACCCAAAACTCGCAACTACGATCGAGAGGAGGACACAGACTTCACCGACTCTTGCAGCTCATTGCAAGAAAAACTGTGCGCGGTACTGACGCGTCATTTATGCCGAAATGAGGATCAAGTTTTGCGCGAATTTTCGGTTAACTTGCTGCACTACCTGGCTGCGGCAGACAGTGCGATGGCACGCACCGTAGCACTTCAATCGCCTTGTATCTCTTATCTTGTCGCTTTCATTGAACAAGCTGAACAAACGGCTTTGGGTGTTGCCAATCAGCATGGTATTAACTATCTGCGCGAAAATCCCGATTCAATGGGCACTAGCTTGGATATGCTGAGACGTGCAGCAGGAACACTGCTTCATTTGGCAAAGCATCCCGATAATCGATCGCTATTTATGCAGCAGGAACAGCGACTTCTTGGATTGGTTATGTCTCACATATTGGATCAACAAGTTGCACTGATCATATCTCGAGTGCTCTACCAAGTATCTCGTGGGACTGGTCCTGTGCATTCAGTTGAATACAGATTgttgcagcagcgacaacaacaacgacccGGCCAGGCCCCAACTGAAAAACTTAGTGCGCCAGCAACgaccataaatataaaaagcgaGTCGTGCCTGCAGCCAGAGCTAACTGCTGATGTCAAGCCTTCAAGTAGTGTATCCTCGTCAGCTGTTATTAATGATGATAATAGCAACAGTAGCCAACAATTAGCACCAGCCGCAACATTTAATGATGTTAGCAACAGTAGCACAAATAGCAATAGCTGCGGAACCGTTAGCAGTAATCAGACCAATAGCAGCAGTTTGGGAAGCAGCAGTCAACCTACTCTTAACAACTTGGTGACGCCAAGCGAGCAACAAGTGGGTAAAATTTCTTCCGCTTCGTCTTCCGCTTTGTCATCCAACAATTTAGTTAACATTAATGACAACACATTATCGTCGAATTCAACaaccccaacaacaaccactgtGGCACAGCCGACTGCACCACCGCCAGCaaatacaactacaactgcagcagttgcGTAG
Protein Sequence
MNEKIKSPSTQCGATGGAGGNVVPPVAGSTGGATPPTSVPPTPNNGNDPIIQQGGSVPHSYGGPPSGAVPGATPDSATAMSHYHHIHQQQQPQGPPLPTHMQHHGGPPPPQGPIPLPPEHTPGVKDEYGSAHLPPPPGVQHPHAHPAYARYHSGDPNMDPYRYGHAATQQPPPGSKPPHQQQPPQGAGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYVNNYDSQQAANAAAVAAAQQQQHQQNAQQQPGGPPPPLPGHGPPPPQHQPYGAQQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSRGQSPYPPAHSQNSGSYPSSPQQQQQTQQQQQTTQQSGTPGASAPPPVPSQQQQQNTPPTSQYSPYPQRYPTPPGLPTTGPNHRTAYTTHQYPEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPAPHSSGGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQSTVVAGPPPLPPHSLSGGPPSQQQSQQQLASNSTSSASNSPQQTPPPAPAPNQNVNNMVTPPPPPQGTAGGYPIPQHIHGSYKMSLPGQSPGAQGYPTQQYPQGNYSPRPQYSSGAYGTGPQPPTTSQPGGGTNTMQSGAQAGYPRSMPNHGSGSPHPQYPPYQWVPPSPQQSVPGTGSGQIGAAMGNHVQGKGTPPPVGPPQPQTSGSPRPLNYLKQHLQHKGGYSGSPAGPQPQGYGNGPTGMHQAMPMGPPHHMGPPQSMGPPTSTPPQSMLGTQASSDSGVEHISQDNGISSSASSPATSLHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKLDPYSQSHLAPPSTSPHPVVMHGGGGPTGEDYEMNSPPNWPRPAASSQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPVPPGGAPNTTIDGYSGYSGAGAYPPSAGPQPDYTAASQMPRPPSQNNPQAPHPGTQNQTTATVAGDNINVSNPFDDPIAGGVAAGGVAVAVVGGASHGAPPPPPHSPHTAPQSGNQHHQQGIPTQMPSPSQQPPAPPPQQHGPPSTQHARPGTGVPYPQGSSGYPTPVSRTPGSPYPTQPGAYGQYGSGDQYNTAGPPGQPFGPSQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQGPPGGPQPPVQAVTGGPPSSGAPVAPPNSGYAPNTPNQQDYYRPPDQNPQPRRHPDFIKDSQPYPGYAARPQIYGGWQGGNPQYRPQYPTSSAPQSWGNAPPRSAPPGGPHGPLGPQQTGVAQWEQHRYPPQQPPPPPQQQQPPYQQSTQPGQQPQQAAPQWAQINAVQAPPQTSISQPVSSALRPPAGIVQQQRMPSGVPVMSPQQQQGQAVPQPPHGGVPPSSMPPVTGGMVKPPYAMPPPLQSAGVSPGVSIGGSAPASMIAQKQSPLIGQGMQPTQQQPPHQLPNQQAAYAPQIAGVGAQLVKKELIFPHDSIESTTPVIYRRKRLTKVDVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCDEATEDADDDADSGTVMSLKVEGRETRCVRSISSYNRRRHYENMDVKRVVRSEDSDDADEGIDLGQVRVQPNPEERSLLLSFTPNYTMITRKGVPVRIQTADHDIFVDERHKAWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARFIRSKHRSKQEIVQKSNNTLRPEDISSVLKQEDTTSSTEDSSLLQQTYNKKRRLVSNIGTAGSDKKKSKLGVEFAQPTVDMKKETDIEIVGSNLTDSDCRAIDMEIESPQQLRLTNGVTSLPKGFDPKSTVRDDAQVLQRRRDSSYEDECYTRDEASLYLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLFLLNHDHLRRTPKTRNYDREEDTDFTDSCSSLQEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPVHSVEYRLLQQRQQQRPGQAPTEKLSAPATTINIKSESCLQPELTADVKPSSSVSSSAVINDDNSNSSQQLAPAATFNDVSNSSTNSNSCGTVSSNQTNSSSLGSSSQPTLNNLVTPSEQQVGKISSASSSALSSNNLVNINDNTLSSNSTTPTTTTVAQPTAPPPANTTTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00512502;
90% Identity
iTF_00547142;
80% Identity
-