Dlac012234.1
Basic Information
- Insect
- Drosophila lacertosa
- Gene Symbol
- retn_1
- Assembly
- GCA_004143845.1
- Location
- SCDZ01000255.1:99526-110235[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-26 5.6e-23 81.4 0.0 2 89 20 105 19 105 0.96
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAgCTCTACGAAATCAACGATGATCCCAAGCGAAAGGAGTTTCTCGACgatttgttttcgtttatgCAAAAGCGAGGCACGCCCATCAATCGACTGCCGATTATGGCCAAATCGGTGCTGGATCTCTATGAACTGTACAATCTGGTTATAGCACGCGGCGGCCTCGTCGATGTGATCAACAAGAAGCTCTGGCAGGAGATTATCAAAGGATTGCATTTGCCGTCCAGCATCACAAGTGCCGCATTCACGCTGCGCACCCAATACATGAAGTATTTGTATCCGTACGAGTGCGAGAAGAAGAATCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCCTTGACGCCCATTTCGCGGCCACAGCTGCCTGGTGGCATGCAACAGATGTCGCCGCTGGCGCTGGTCACACACGCCGCGGCGGCCACCAATCAGCAGGCGCAGGcagcggccgccgccgccgcagcgcaTCGTCGACTGATGGGCGGACCGGCGTTCGGACAGATGCCCAATCTGAGCCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCAATTCGGCGCACACCTCACCACAGCAGCGTGAAGCTTTGAACCTTTCCGATTCGCCACCAACTCTCAACTTGAACCACATTAAAAGGGAACGCGAACGCGATCCAACGCCGGAGCCAGCGGATCAGGAGGAGACACCGCATCAGCCGCCGCCGGCAAAGCGCGTGGGTGGCGGCCTAATGCCGCCCGGCTTCCCCGCCAACTTCTACTTGAATCCACACAACATGGCGGCCGTTGCAGCCGCCGCGGGCTTCCATCACCAGGCCAACAACAGCGGCCATCTTAACCACCATCACCACCACCTgaaccaccagcagcagcagcagctgcagcagcagcaacagcagcaggacgCCGCCTCCGACGGCGAGCCGGAGGACGACTTCGCCAATGGGGAGCACAACACGACGGGCAACTCATCGTCGCTGCACGACGACAGCGAGGCGCCGCAGCTGAACGGGCACCACCTGCACCACCATCACCACGACACGCAGCACGAGCACGAGCACGAGCACGACACGGAGCACGACACGGAgcaccatcatcatcaccagAATCATTTGGACAAGTCGGACGACTCGGCCATCGAGAACTCGCCCAGCACCTCGACGACGGCCTCCGCCTCGGGCGGCCATCGTCACAGCTCCCCTGTGTCCACCAAGAAGAAGAGCACAGCTGCCAAGACCCAGACAGCTGGCCAGGACGAGCCTGGCGGCGCAGGATCCAACGCGGGTGCCGCCAACCTGAAGCTGAATCCCCTCGAGACGCTCAGCCTGCTGTCGGGCATGCAATTCCAAGTGGCACGCAACGGCACTGGCGCCAATGGCGAACAGCAGCTGATGGTTAATCTGGAGCTGAACGGCATACGCTACTCGGGCATGCTGGTGGCCAACACGGCAACCAGATCCGAGCAGACTCCACAGGCGGAAACGACCAAAGTTGCCACAGCCGAGGAGCCAATCCAGCCCAAGCACGAGATCAGCAGCAACGAGATCAGCGAGGAggaagtgcagcagcagcagcagcagcctgcgGAGGAGATGTTAAATGGCGTCGCCGAGGAAACTTCGGATGTGGGCGGtggtgtgggcgtgggcgtgggcgttgtGGGCGTGTCGCTGCTTAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPQLPGGMQQMSPLALVTHAAAATNQQAQAAAAAAAAHRRLMGGPAFGQMPNLSPELSTRDALSAQVALWHMYHNSSPTNSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQEETPHQPPPAKRVGGGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANNSGHLNHHHHHLNHQQQQQLQQQQQQQDAASDGEPEDDFANGEHNTTGNSSSLHDDSEAPQLNGHHLHHHHHDTQHEHEHEHDTEHDTEHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSTAAKTQTAGQDEPGGAGSNAGAANLKLNPLETLSLLSGMQFQVARNGTGANGEQQLMVNLELNGIRYSGMLVANTATRSEQTPQAETTKVATAEEPIQPKHEISSNEISEEEVQQQQQQPAEEMLNGVAEETSDVGGGVGVGVGVVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -