Basic Information

Gene Symbol
ATFC
Assembly
GCA_004143845.1
Location
SCDZ01000190.1:149750-155054[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3 1.6e+03 -0.6 0.8 28 45 88 105 84 116 0.64
2 2 6.5e-11 8e-08 32.4 13.2 2 63 177 238 176 240 0.96

Sequence Information

Coding Sequence
ATGATACCACACTGTGGATACCGTTACATGTGGAACCGTGAAATTGTGATCAATTCGCAAAAGTTGGTGAAGCGACaGTGCCTTATCGATTACAAGTCGACAGACTTTCTCGATGTGGTGCCGCAGGACATGCAACCATCGATAACCAAAGTGCAGGTCGCTGCAAATGCCGTTGATTTCCAACAACAGGGCGACTCCTCCTCACTGATATTACAACAACTGACGCCGCCGCAATCGCCGCCACAATTCGATGCctaccaacagcagcaacagcaacaggagcaggagctggtcAAACAGGAGCACAAGCTgCTGTCCTATGCCTCagatgctgcagcaacaacagcagcagcagcaactgctgccgctgcttatGGCTACAACAACTGGGCCCCCTACAGCGAGATTACACCAGAAACACAGCTCGTCGATGACATTGAGGAGGAGCCGCAATTATCATCGCCAGCATCAGCTTCATCGAGTCGAGGCAGCGCCAAGAAGCGTACGCGCCCTTACGGACGCGGCGTGGAGGATCGCAAGATCCGGAAAAAGGAGCAGAACAAAAATGCGGCCACACGCTATCgccagaagaagaagatggaAATGGAGCATGTGCTGGGCGAGGAACAGGAATTGGCCCAGGCCAACGAGGCGCTGCGTCGCACCCTCTCCGAGCGGCGTCACGAGTCGCGCTATCTGCGACAGCTCATACGCGAGTTCTACAAGGAGCGCAAGcaataa
Protein Sequence
MIPHCGYRYMWNREIVINSQKLVKRQCLIDYKSTDFLDVVPQDMQPSITKVQVAANAVDFQQQGDSSSLILQQLTPPQSPPQFDAYQQQQQQQEQELVKQEHKLLSYASDAAATTAAAATAAAAYGYNNWAPYSEITPETQLVDDIEEEPQLSSPASASSSRGSAKKRTRPYGRGVEDRKIRKKEQNKNAATRYRQKKKMEMEHVLGEEQELAQANEALRRTLSERRHESRYLRQLIREFYKERKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-