Basic Information

Gene Symbol
cnc
Assembly
GCA_004143845.1
Location
SCDZ01000225.1:171267-187576[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9 7.2e+03 -2.7 1.8 24 43 575 594 572 601 0.77
2 2 2e-15 2.4e-12 46.9 4.7 3 62 769 828 767 831 0.92

Sequence Information

Coding Sequence
atgcattttttcttcttgccACACACAGGTGAATATATACGCTTGCCACTGGATGAGCTGCTCAACGACGTGCTGCAATTGGCTCCGTTTACACTCGAAGACGACCTGCCGAACGATTCGGTTGCATCCACATCGCAggctgcagcggctgccgcATTGAACAGCAAATCTGTTGCACGGATTGTATCGGAGACTGGGGAGGATTTGGCACTCGTTGAGCAGGAGCGCGAGAGCAACAGCGAGCGGGACAGGGACGAGGCTAGTTTCTCGGCCAGCGACTTTGAGGATCTGCAGGACTCGGTGGGCTCGCCCCTCTTCGATTTAGATGACGAGGCCAAGAAGGAACTAGACGAAATGTTGCAATCCACGGCACCGCCCTACCACCACGCCCATCCCCACGCCCACCCCCACgcacaccaccaccaccatcatCATGCCGCCGCCCATCACCACGCCCACCaggcagccgccgccgccgcccaccaGCGAGCGGTCCAGGCCAGCGCCAACTACGCGACGATGGGCAGCGCGCCCGGCAGCGCCTTCCAGCGCCAGCCGCCCAGCTCGGCGGGCTTCCATCACGGCCATCATCAGGGCCGCATGCCGCGCCTGAATCGCAGCGTCTCCATGGAGCGCCTGCAGGACCTGGCCACCTACTTCAGTCCCCCCTACGTGCCGGACATGTCGCCGTATCCGCCGCACTACTCGAGCTACTCGTATCAGAGTccggccgccgctgccgccgccgcgggCATGCCGCCCGGCGCCCAGCAATATGGTCAGGCGTCGGCCACGCTGCccccaccgccgccgccgccgccccatCACGGGCATGGGCATGGCCATGGGCATCATGCGGCCATGCTGCATGCCCCCAACTCGACGCTGGGCGATCTGTGCTCGGCGGCCGGCGGCCAGCCGCACTATGGCCACAATCTGGGCTCGGCGGTCTCGTCCAGCATGCACCTGACCAACTCGGCCAGCCACGAGGCGGacggcgctgccgctgccgctgcggccgcagccgccgctgctgctgccagcagcaactacaagaTGGAGCACGAGATGATGTATTATGCGAACACTTCTTCGGACGTGAATCACACGGATGGCTTGATCAATTCCTTTTTCAACGATGAAGATCTTCACTTGATGGATATGACGGAAAGTTTCTGTCGCATGGTGgacaacagcaccagcaacaactcGTCAGTGCTGGGCCTGCCCAGCAGCGGCCATGTGAGCAACGCGGGCAGCTCAACTCTGACAGGTGGCGGCCATGCGAATGCCAACGTTGTTGGCGGCGGTGcagttggtgttggtgttggtgttggtgttggcggcgtcggcggTGTCGCCTCTATGAgcggagcagctgctgtgggCGCAGCTGGTGGCATGACCAGCGATCTATTGGCCAACTCGGGTGGCGCACAAGGCGGCGCCGATCGGCTGGACGCGTCCAGCGACAGCGCTGTCAGCTCGATGGGCTCCGAGCGGGTACCCTCGCTCTCCGACGGCGAGTGGGGCGAGGGCAGCGACTCCGCCCAGGACTATCATCAGGCCAAGTACGGCGGCCCCTACGACTTCAGCTACAACAACTCGCGCCAGCCGCCCGTCGCCCAGAAGAAGCATCAGCTCTACGGCAAGCGCGATCTCCACAAGCAAACGCCCAGCGCGCTGCCGCCCGCGGCGCCTCCAGTCGCTGCCACAGCTCatacgcagcagcagcagcaacagcaacaacaatcacagcagccgcagtcgcaggtGCAGAGCATCAAGTACGAGTACGAGGCGGGCGCTGCGGCTTTTCCGGGCAGCGTGGTCGGCGAGGCGGCCGCGATGGCGCCCATCCTGTCCAAGGACTATCATCAGGCGTATGGAATGAGCGCGGCCAGCGCCTTTACCGCCGACTACGGCGTGCCGCGTGCTCCGCTCACGCCGCAGGGCATTGTCCAGCTGAATCACACGTACGCCCTGCCGCAGGGCACGGGTGCACTGCCACAGGGTAGCGGCTCGCTGAGCAGACCCCATCCGCGCGACAAGAAGCCGATGGGCGGCAGCAAGCATGCCGCCAAATCCTCGCCGGGCAGttccagcggcggcggcggcagcggcggcggcagcggcagtggtGGCAACGCCAGCTCCATCGAGGACGAGCATCTGTCGCGGGACGAGAAGCGCGCCCGCGCCCTTAACATACCCATCGCGGTGGGCGACATCATCAATCTGCCCATGGACGAGTTCAACGAGCGCCTCTCCAAGTACGATCTGAGCGAGAATCAGCTGTCGCTCATCCGCGACATTCGGCGGCGTGGCAAGAACAAGGTGGCCGCCCAGAACTGCCGCAAGCGCAAACTCGACCAGATACTCACCCTGGAGGACGAGGTCAACACGGTGGTCAAGCGCAAGTCGCAGCTCAATCACGATCGCGATCAGTACGAGGCCGAGCGCAAGCGCATTTCCAACAAGTTTTCCATGCTCCATCGACATGTTTTCCAGtatCTGCGCGATCCCGAGGGCAATCCTTGCTCGCCGGCGGACTATAGCCTGCAGCAGGCGGCGGACGGATCCTAG
Protein Sequence
MHFFFLPHTGEYIRLPLDELLNDVLQLAPFTLEDDLPNDSVASTSQAAAAAALNSKSVARIVSETGEDLALVEQERESNSERDRDEASFSASDFEDLQDSVGSPLFDLDDEAKKELDEMLQSTAPPYHHAHPHAHPHAHHHHHHHAAAHHHAHQAAAAAAHQRAVQASANYATMGSAPGSAFQRQPPSSAGFHHGHHQGRMPRLNRSVSMERLQDLATYFSPPYVPDMSPYPPHYSSYSYQSPAAAAAAAGMPPGAQQYGQASATLPPPPPPPPHHGHGHGHGHHAAMLHAPNSTLGDLCSAAGGQPHYGHNLGSAVSSSMHLTNSASHEADGAAAAAAAAAAAAAASSNYKMEHEMMYYANTSSDVNHTDGLINSFFNDEDLHLMDMTESFCRMVDNSTSNNSSVLGLPSSGHVSNAGSSTLTGGGHANANVVGGGAVGVGVGVGVGGVGGVASMSGAAAVGAAGGMTSDLLANSGGAQGGADRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQAKYGGPYDFSYNNSRQPPVAQKKHQLYGKRDLHKQTPSALPPAAPPVAATAHTQQQQQQQQQSQQPQSQVQSIKYEYEAGAAAFPGSVVGEAAAMAPILSKDYHQAYGMSAASAFTADYGVPRAPLTPQGIVQLNHTYALPQGTGALPQGSGSLSRPHPRDKKPMGGSKHAAKSSPGSSSGGGGSGGGSGSGGNASSIEDEHLSRDEKRARALNIPIAVGDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNTVVKRKSQLNHDRDQYEAERKRISNKFSMLHRHVFQYLRDPEGNPCSPADYSLQQAADGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00526325;
90% Identity
iTF_00495609;
80% Identity
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