Basic Information

Gene Symbol
ncor1
Assembly
GCA_018153305.1
Location
JAECXX010000141.1:11485272-11489375[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-08 9.5e-05 22.4 0.0 3 43 347 387 346 389 0.97

Sequence Information

Coding Sequence
ATGCCCTCTGGAGTGAGTCTGTCCGTGGGCACTGTCACCGTTTCCACGGCGGGATCGGCATCCAGTCACAGCGGCAGCAGTAATGTTGCCGCCGGAACGGGCTCGGGAAATACGGGATCCGCCAGCACAGAGGCCTACCATCCTCAGGTGGAGGCCATCTCGCCCACGTTGCCCAGCGATAGTTCGATCGAGGAACGTGGAAGGACCAGCGCCAAGGAGGACCTGCTCATGCAGATCCAAAAGGTGGACAATGAGATCAAGTCCGCCGAGACGACGATGGAAACGCTGCGCAAGAAGGAGAAGTCGCTGATGGAGGATGCCGCCGTGGCCAAGGAGCAGAAGGCCGCCAAGGAGGTGAACGACAACAACAACGATCAGGAGGAGGAGGTGGCGGAGCTGGCCTGGCGCAGTCAAATGCTGGCCAAGAAGATCTACGCGGCCAATCGGAAGACGGCCCATGCGCAACATTCCATGCTGCAGGTTGCAGCAGCCGAGGAATCCTCAGCAGGATCCGTAGCCGGCAGACCCTGGCTGCCACTGTATAACCAGCCCCTCGATGTGGAGGCCCTGACGCTGCTGATACGCCAGCATCAGAGTCAGGTGCGGGCCCCATTGCTACTGCACATTCGAAAACTGAAGGCCGAGCGCTGGGTGCATAATCAGGGTATGGTCGAGAAGTACACCAAGAACCAGGCGGATTGGCAGCGGCGATGCGAACGGATGGAGGCCAGTGCGAAGAGAAAAGCACGCGATGCCAAGAATCGTGAGTTCTTCGAGAAGGTCTTCACGGAGCTGAGGAAACAGCGCGAGGATAAGGAGCGCTTCAATCGCGTTGGCTCGCGAATTAAATCTGAGGCGGATCTGGAGGAGATCATGGATGGACTGCAGGAGCAGGCACTCGAGGACAAGAAGATGCGATCCTATGCGGTGATACCGCCTCTGATGCACGATGCCCGCCAGAGGCGATGCGCCTATCATAACGAAAATGGACGCATCGAGGATATGGTGGTGGTGCATCAGCAGCGTAAGGCACTCAACATGTGGACCGCCGGCGAGAAGGAGACGTTCAAAGAGAAATATTTGCAACATCCGAAGAACTTTGGGGCCATAGCGGCCAGTTTGGATCGCAAATCGCCTCAGGACTGCGTTCGCTACTACTACCTCAGCAAGAAGACCGAGAATTACAAGCAGCTACTTCGGAAATCCCGCCAGCGGACGCGCAGTTCGCGCAATCCTGCAAAGCCTCCGGCCCCCCAGCCGCAGTGCATCATCGATTCGATGACGACGGGCGTAATGACGCGCCTGCAGCGTGAGCAGCAGCAAAAGTCCGGCAATCGTTCGTCCGCCGTTGCCGAGCGCGAAAGGGCGGAACGTGCGGCCGAGCGAGAACGTGTGGCGGAGAAAGCTGCGGCGGATGCGGCCAAAGCGGCTGAAAGTGCCGCCGAGAAGGCAAGTGCGGCCACAAAAGCCGTCGAGGCGACGGCCGCCGGTGAAAAGGTGGCCAAAGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCAGAGATCTCAGCGGGCGGCGGCGAGGCGAAGAGCAAAACTGCCGACGAGGAGGCGGCAGCAACAGCCGGAGCAGCCACCGTGGCCACAGCCGGCACACCGGCAACTGGAGCAAGTGCAGCCAGTGCGGGCGAGGCAACAACGGCAACGGGAGCCACGGCGACGGCGGCCGCGAAGGGAGCTGGCAAACCAGAAACTGCGACCGAGCCAGCGGGAACTGCTGCCAAAGGAGCGGATTCCCGGGCGGAGATCAACGATCCGCTGGCCAAAACTGGTACCAAAACCGTCAATGCCGAGGGCTATAATGCCAACGGTGGAAGCACCACCAGCAATGCACAAGCCTCTGCTGCAGCGACACAGGGCGTAACCTTGAATGGCTTTAAGCCGGGCTACCAGACCGTGGTCATGGCCAATGCGAAGGCGAATCCGGGGACCGATGAATCTGCGTCTGGCGGAGCAGCACCTGGATCTGGAGCAGGGACGAATGCGGCGGGGACGACGGGTGGCGATAAAATCGTCAAGACAACCCCGTTATCAAGGGCACCCAATTCAACATCTTCAACGGCAGCTGGTGAGAGTGGTTCTGGTGTGGCAACTTTCCCACATACCGCCACCACAGCGGGCAACTATCTTGGCCAGAAACTGAAGGCGGCCCAGGTCGAGGGATTGGGAGCTGGCAACGATCTCCACTCGGATGTTAGTGAATCCAAGAGGAAGCGCTTCGAACTGAACTCTGGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGGCCAATGCCAAGGATAATTCGATGGCCAAGACATCGCTGCCATCGGGTTCGTCAGCTTCGGTGGTCACATCCACGGCGGCAGCGTCCTCATCCGGCTCCATGCTGCTGATCAGTGCCGCCTCCATTATGTCCACCGCATCGGGAGCCACATCCTCGAGCACGGCGACCACCACGGCCACGGCTCCGGCTTCGGCGATCTCCATGCCCCAAATGGCGGACGGAAGCGCCAACTCGATGGTCAACGCCTCTGATATCCTCGTCCACGATGGCAAAGGTAAGTGCCGAACTTACTTTTATTATGGAAGGGATTTTGTAAATTATTGTCACGTTATATTCAATCTTTCAACGAACCAGTAA
Protein Sequence
MPSGVSLSVGTVTVSTAGSASSHSGSSNVAAGTGSGNTGSASTEAYHPQVEAISPTLPSDSSIEERGRTSAKEDLLMQIQKVDNEIKSAETTMETLRKKEKSLMEDAAVAKEQKAAKEVNDNNNDQEEEVAELAWRSQMLAKKIYAANRKTAHAQHSMLQVAAAEESSAGSVAGRPWLPLYNQPLDVEALTLLIRQHQSQVRAPLLLHIRKLKAERWVHNQGMVEKYTKNQADWQRRCERMEASAKRKARDAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIEDMVVVHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKPPAPQPQCIIDSMTTGVMTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAESAAEKASAATKAVEATAAGEKVAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPEISAGGGEAKSKTADEEAAATAGAATVATAGTPATGASAASAGEATTATGATATAAAKGAGKPETATEPAGTAAKGADSRAEINDPLAKTGTKTVNAEGYNANGGSTTSNAQASAAATQGVTLNGFKPGYQTVVMANAKANPGTDESASGGAAPGSGAGTNAAGTTGGDKIVKTTPLSRAPNSTSSTAAGESGSGVATFPHTATTAGNYLGQKLKAAQVEGLGAGNDLHSDVSESKRKRFELNSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKANAKDNSMAKTSLPSGSSASVVTSTAAASSSGSMLLISAASIMSTASGATSSSTATTTATAPASAISMPQMADGSANSMVNASDILVHDGKGKCRTYFYYGRDFVNYCHVIFNLSTNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00588079;
90% Identity
iTF_00588079;
80% Identity
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