Dkun009010.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila kuntzei
Gene Symbol
RREB1
Assembly
GCA_035042165.1
Location
JAWNLU010001388.1:785011-792334[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.036 2.7 8.8 0.8 1 21 255 275 255 277 0.93
2 13 0.00033 0.025 15.2 0.2 1 23 287 309 287 309 0.98
3 13 8e-05 0.006 17.1 7.3 1 23 315 337 315 337 0.98
4 13 0.025 1.9 9.3 1.9 2 21 573 592 573 593 0.94
5 13 0.036 2.7 8.8 0.1 1 23 745 767 745 767 0.97
6 13 1.2e-05 0.00091 19.7 0.7 1 23 777 799 777 799 0.99
7 13 0.00083 0.061 14.0 2.0 1 23 805 828 805 828 0.97
8 13 0.003 0.22 12.2 2.0 1 23 1113 1136 1113 1136 0.95
9 13 8.6e-05 0.0064 17.0 0.3 2 23 1479 1500 1478 1500 0.97
10 13 0.14 11 6.9 6.3 1 23 1506 1529 1506 1529 0.97
11 13 4.5 3.3e+02 2.2 3.6 1 23 1653 1676 1653 1676 0.79
12 13 0.0084 0.62 10.8 0.5 3 23 1733 1753 1731 1753 0.96
13 13 0.0013 0.099 13.3 4.8 1 23 1759 1781 1759 1781 0.99

Sequence Information

Coding Sequence
aTGCTGGccacacaacagcaacaacacacaacaacaacaacaacaacaagcacagcggcaacagcagcagcaacagttgctgatgctgcgacaacgacaacagttgCTCACAGCAGCGATGCCAGCGACATGGATCGCCGTGAGCGTCGTGATTCGACCACCTCAGAATCATCGCTGGAGCATCTCGACTTGGGACGCACACCAAAGAagctcagcagcagcagcggagcGCCGCAGCCGACGTCGACGCCGCACGACaccacgacaacaacaacgacagcgacagcgacgtcgcGCAAGCGCAAActgcgacagcaacaacaacagcaacaattgctctCAGAtgacgagcaacaacaacagcaacaacaacaacaacaactgttggaTCCGTCTGCGCAGCGACCGCGTCACAAGCAGCGACGCAGCGTCAACGCCAGCATCGTCGTCGATTACAGCGCCAGCGGCGACGCCAGCTCGCTGCGTAAAAAGTTTCGACTGAatcgcagcagcggcagcggcgtcGGCAGCGGCATCGGCAGCGAACTCTCTGAATCGGGTTTCGTTGATGGCAGCGCACATAGCGGTTATTtgctcagcaacaacagcagcgccGTCAGCAGCGCTCAGTCAGCgtcggcagcggcagcggctgcGGCTGCGCAGCAAGCATCATCGAGCAGCTCGGGCGGCTCATCGCCACAGGGTTTGTGCCTCTCGAGCGCCGAATCGGGAATTGGCGCCGGCGACGATCACATGAAATATTTGTGCCCCATCTGTGAGGTCGTCTCGGCCACGCCCCACGAGTTCACCAATCACATACGTTGCCACAATTACGCCAACGGCGACACGGAGAATTTCACCTGTCGCATCTGCTCAAAGGTGTTGTCGTCGGCGTCATCGCTGGACAGACACGTGTTGGTTCACACAGGGGAGCGACCCTTCAACTGTCGTTATTGCCACTTGACATTCACAACGAACGGCAACATGCATCGTCACATGCGAACACACAAGCAACATCAGAcgacacagcagcaacaacagcagtcaCAGCAGCAATCGCAGCAACAATCGCactcgcagcagcaacagttgcagtcacaacagcagcgacgacagcaacatgcgacggcagcaacaattgccacACAGGTTGCAGGTGGCAGATGCGAGAGTTATGAAAGTGATGCTAGTTGCTCCACGGATGTGTCCAGTGCACAaagtcacagcagcaacagcaacagcagcagcagcaatcactccaacaacaacaacaataacaataacaaactaagcaacaacaataataataataataatattgaggagaaggaggagaaagaggagcaacatgttgctgccacattgTGTGGCAAGCAGCGACGCCATaaaatcaacatcaacaacaacaatattatggAAAAGGACGAGCATGAAGAGGGGGACGAGGAGGCAGCAGAGGAGGAAGATGACGATGAGGATGAGATTGAGCATAACTCGGATGTGGAGAGCGTTGAGGATGTGGCACAGTTGATAACCTCCACACCCGATGTGGCAACATTGCTCGCCTCCTCAGGAGCGACCACGCCCAGTCAATCGCCCGCCCCGCCgccaatgttgttgctgttgaattGTCCCGCCTGCGAGGCGGATGATTTTGAATCATGGCCAGCGTTGTGGCAACATTTGGATGCCCAGCATGCGGATATACCCGCCAAGTGCAGGGAATGCGACGTAATCTTTGCCAGCCATCGGCAATTGCAGTCGCACATTTGTCgcggcaacagcaatagcaacagcaacatgcaaATGTTGCCGCTACTCGCCGCCAGCTCAAGTCCCAAGCATGAAATTGTCGAAGATGATGAAGAGGAGCGCGAAGAGCAAATGGAACTGGAACAGGAGCAAGTGCATCAGCAAAGCGAACGCGATGATTTCTTTCAGCAACTGTATCACAAGGGTAAAACCAATATTGCCGCTCCATTGCCGTCGCCAATAAAACACGAACTGCCCTCGGAACATCGGAGCGTCGATAGCCGACAGGATTTGGCCGATATCCAGAGTATACTCAACATGACCAGCTCCAGTTGCACCTCGAGTTTCCTGCGCAACTTTGAGCAATCGGTTAACACACCCTGCTCCAGTCAATACAGCTTGGATGGACGCGATGGCGATGAGGAGGCCCAAGATGCATTCACCAGTGAATTTCGACGCATGAAATTACGCGGTGAATTCCCCTGTAAACTATGCGTCGCTGTCTTTCCCAATTTGCGTGCCCTCAAAGGACACAATCGTGTCCATTTGGCAGCTGTTGGTCCCGCAGGACCATTCCGCTGCAACATGTGTCCCTATGCTGTCTGCGATAAGGCGGCCCTGGTACGGCACATGCGCACCCACAACGGAGATCGTCCCTATGAATGTGCCGTGTGCAATTATGCATTCACTACCAAGGCGAATTGTGAGCGACACTTGAGGAATCGTCATAGTAAAACGAGTCGCGAGGATGTTAAACGTGCCATTGTCTATCATCCGGCGGAGGATGCCAGCTGTGAGGAGTCCAAAACGGGACAAAGATTGCACGATTCCGAGTTGAATGAATTAAGTTATCGGTCAATGTCGCCGCCGCTGGAGGCAGCATCGCAATTGAAGCACATGTTGCTGGCAGAACCAACAACAGTTGCTCCAACTACAGTAGTTGCTCCAGTTGTTGCTgccccagcagcaacagttgctgtcaAGGCAGCTCCCTTGAAGATACAAGTCAAGAGCTTGGATCAATTGGTGGATAAACCATTGGCGCCAGCTTTGGATCTCAGCATGGATGTCCTGGATCTAAGCAAAAAGGAGCGACcacaggagcagcaacaggagcaacagcaacagcagcagcagcagcaacaacgggaGCAACAACGGGAGCAACAACGTGAGCGCGAGCGTGAATTGCTGCTgtgtcagcaacagcagcagcaacaacaacagcaacaacagcaacagcagcaacttttTGGTGCTGGCGATGCTGCCACACAGTACATGCAACAATTGTTCCGTAATCTCATGTTCCAACAATCGCCAGCATTTCCCTTCTTCAGCTTTAtgccaccaacagcagcagcagctggcgATAAAAAcccatcagcaacatcagcaactacagcagcagcagcagctgttacGCCAGCAACTGGCGCTGCTTTGGGCCTCCCATTGCCACTGTCCAATGTGGGCGGAGTGGGCGTGCCCGTGCCCGCTGGTGGACCCGTCAAAATGGTCATCAAAAATGGCGTCTTGATGccgaaacaaaaacaacgtcGCTATCGCACCGAACGTCCATTTGCCTGCGAACATTGCTCGGCAAGATTCACACTCCGTTCCAATATGGAGCGTCACGTGaagcaacaacatccacaattCTATGCACAGCGACAGCGGAGTGGACACCATGTGATGCGTGGACGTGCTGCATCCTCAAATgccgctgcagcagcaacagcagccgcagcagcagcagcagctgccgccgccgcagcagcagcaatgtcaaatttaagccagcaacaacatggaCATCATGCACATCATGCGCATATTTCGGATCAGGTGAAATATGCGATACTGGCACAACAATTGAAGGCACGCAAGGATACGGATTTATTGCAACAGGCATTGGCACATGGCTCCAGCAGTGTGGCCGGTAATCCTCTACTGCATTTCGGCTACAAGCAGCAACATCACAACAGCAATGGTAATGGTAACAGCAATGGGAATGGACATCATCCTGCTgtcaatgatgatgatgagcccaaattgataattgatgaggatgatgaggatgaggaggaggaggagctggaTGATGagctggaggaggaggattTGGAGGAGGATGActtggaggaggaggaggagcagcaggaacaggaacaggaacgggaacgggaaccaCCACGCACTTCAACCCCCATTGAGGCGGCCAAAAAGGTGGCGGAAACAATTCTGGAGCAGGCCATCAAAGCGGGCAAATCCACAGAATTTGAGTCCAAAAAGTTACCCACTCCCACagcaactgccacgcccacttcgACTCCCACTCCGACTCCGAATCCCACACCAATGAAAACAATGATTGCCCAAGCGGAATCCGTGGCGAAATCCTTGAAAGAAGTTGCCAGTTCACCGTTTAAAGATGAATCTCAGGATTTGGTGCCGGTTTCGAAGCTGGTGGACAATGCCACCAGCAATCAGGTGTCCTTCAATAGCTACTTTCGTCCCAGCGATGTCGCCAATCACATGGAGCAATCGGATGAGGAGGGACTCGTTGCATCCGGCAGCGCCAGTGAGAGCAACAATTCCGGCACCGAAGATgtcaccagcagcagcagcaatgagCCCAAAAAGAAATCCGCTTATAGTTTGGCGCCCAATCGTGTCAGTTGTCCATATTGCCAGCGAATGTTCCCATGGAGCAGCAGCTTGAGGCGTCACATCCTGACGCATACGGGACAGAAGCCCTTCAAGTGTTCCCATTGCCCATTGTTGTTCACCACCAAGAGCAACTGTGATCGCCATTTGTTGCGGAAACATGGGAATGTGGAGAGTGCGATGAGTGTTTATGTGCCCACCGAGGATGTGAGTGAACCGATACCGGTGCCCAAATCCGTGGAGGAGATTGAGCTCGAGGAGCAGCGACGTCGCAAGGCCGAGCAGCTGGAAAGGCAGCGGGAGCGTGAAAGGGAGCGGGAACTGGAGCGGGAACGGGAAcaggaaagggaaagggaattGGAGCGAGAGCGGGAGTTAGAGAGGGAACgggaacagcagcaacagcagctcatCCAGCAATTGGCGGCAGCAGCACAAATGGTTGCCGCCTGCACAGCCTCCGTTAACAGCACCTCCCCGCCAGCCGCTGGCGCCGCCAGTCCCAATGAATCCCAGGGTAGCGATTTACCCTATAAATGTCATCTTTGTGAATATTCGTTCGGGGAGCGTCTACAATGTTTGGAGCACATTAAACAGCAGCATCCGCACGAGTTTGCATTGCTGTTGGCCAAAGGTGCCATTGAAACGGaggagcaacagttgccgccgccaccgccgccagcaacaacagttgcctCCGATGAGGAATCAACACTTGCCACACGTGCCACAAATGTTAAATATCCGGATTATACGAATCGTAAAGTGATTTGTGCATTTTGTGTGCGTCGCTTTTGGTCCACGGAGGATCTACGTCGTCATATGCGTACACATTCCGGAGAGCGTCCATTTCAATGCGAGATTTGCCTGAGGAAATTCACATTGAAGCACAGCATGTTGAGGCATATGAAGAAGCACAGTGGACGCAGTCACAATGGGGATTTGGGTGGACAATCCGATTGTTCTGATGATGAGCaTCGTCTGGGTGAGCATAAGGAAAACATTGCTGAATCCTCAACACCAACGTCAGCAACTGCCgctgccgcagcagcagcagcagcggcggcagcagcagcagctgcaagtGGCGATTTAATTGGCAATTTACTTGGTATTAGTGATCAAGGAATACTTAATAAATTGCTATCCTCCGCTGACGAGGCAGCTAAGCTACTAGGCGTTGACAagtaa
Protein Sequence
MLATQQQQHTTTTTTTSTAATAAATVADAATTTTVAHSSDASDMDRRERRDSTTSESSLEHLDLGRTPKKLSSSSGAPQPTSTPHDTTTTTTTATATSRKRKLRQQQQQQQLLSDDEQQQQQQQQQQLLDPSAQRPRHKQRRSVNASIVVDYSASGDASSLRKKFRLNRSSGSGVGSGIGSELSESGFVDGSAHSGYLLSNNSSAVSSAQSASAAAAAAAAQQASSSSSGGSSPQGLCLSSAESGIGAGDDHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTTQQQQQQSQQQSQQQSHSQQQQLQSQQQRRQQHATAATIATQVAGGRCESYESDASCSTDVSSAQSHSSNSNSSSSNHSNNNNNNNNKLSNNNNNNNNIEEKEEKEEQHVAATLCGKQRRHKININNNNIMEKDEHEEGDEEAAEEEDDDEDEIEHNSDVESVEDVAQLITSTPDVATLLASSGATTPSQSPAPPPMLLLLNCPACEADDFESWPALWQHLDAQHADIPAKCRECDVIFASHRQLQSHICRGNSNSNSNMQMLPLLAASSSPKHEIVEDDEEEREEQMELEQEQVHQQSERDDFFQQLYHKGKTNIAAPLPSPIKHELPSEHRSVDSRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSLDGRDGDEEAQDAFTSEFRRMKLRGEFPCKLCVAVFPNLRALKGHNRVHLAAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHSKTSREDVKRAIVYHPAEDASCEESKTGQRLHDSELNELSYRSMSPPLEAASQLKHMLLAEPTTVAPTTVVAPVVAAPAATVAVKAAPLKIQVKSLDQLVDKPLAPALDLSMDVLDLSKKERPQEQQQEQQQQQQQQQQREQQREQQRERERELLLCQQQQQQQQQQQQQQQQLFGAGDAATQYMQQLFRNLMFQQSPAFPFFSFMPPTAAAAGDKNPSATSATTAAAAAVTPATGAALGLPLPLSNVGGVGVPVPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRAASSNAAAAATAAAAAAAAAAAAAAAMSNLSQQQHGHHAHHAHISDQVKYAILAQQLKARKDTDLLQQALAHGSSSVAGNPLLHFGYKQQHHNSNGNGNSNGNGHHPAVNDDDEPKLIIDEDDEDEEEEELDDELEEEDLEEDDLEEEEEQQEQEQEREREPPRTSTPIEAAKKVAETILEQAIKAGKSTEFESKKLPTPTATATPTSTPTPTPNPTPMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVSKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSNEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRKAEQLERQRERERERELEREREQERERELERERELEREREQQQQQLIQQLAAAAQMVAACTASVNSTSPPAAGAASPNESQGSDLPYKCHLCEYSFGERLQCLEHIKQQHPHEFALLLAKGAIETEEQQLPPPPPPATTVASDEESTLATRATNVKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGDLGGQSDCSDDEHRLGEHKENIAESSTPTSATAAAAAAAAAAAAAAAASGDLIGNLLGISDQGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-