Basic Information

Gene Symbol
VEZF1
Assembly
GCA_035042165.1
Location
JAWNLU010001684.1:2787928-2792538[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0018 0.14 12.9 2.0 1 23 209 231 209 231 0.96
2 26 0.071 5.3 7.9 1.5 1 23 237 259 237 259 0.97
3 26 0.47 35 5.3 0.9 2 23 291 312 290 312 0.96
4 26 0.0016 0.12 13.0 3.6 1 23 387 410 387 410 0.94
5 26 3 2.2e+02 2.8 4.2 2 23 422 445 421 445 0.93
6 26 0.18 13 6.6 2.6 1 23 451 473 451 473 0.97
7 26 0.071 5.2 7.9 0.3 2 23 492 513 491 513 0.96
8 26 0.0038 0.28 11.9 1.5 1 23 588 611 588 611 0.96
9 26 0.029 2.2 9.1 0.1 1 22 620 641 620 641 0.95
10 26 1.3 97 3.9 7.5 1 23 650 672 650 673 0.93
11 26 0.0002 0.015 15.9 0.3 2 23 704 725 703 725 0.97
12 26 5.9e-06 0.00044 20.7 3.5 1 23 733 755 733 755 0.99
13 26 0.061 4.5 8.1 1.5 1 23 905 928 905 928 0.95
14 26 0.015 1.1 10.0 2.2 1 22 935 956 935 956 0.94
15 26 0.091 6.7 7.5 0.5 1 23 965 988 965 988 0.91
16 26 1.2e-05 0.00089 19.7 1.8 1 23 1013 1035 1013 1035 0.97
17 26 0.00014 0.011 16.4 0.9 1 23 1042 1064 1042 1064 0.98
18 26 0.0085 0.63 10.8 0.0 2 20 1091 1109 1090 1111 0.93
19 26 0.011 0.84 10.4 4.7 1 23 1156 1179 1156 1179 0.96
20 26 0.02 1.5 9.6 0.4 1 23 1216 1239 1216 1239 0.96
21 26 0.00099 0.073 13.7 3.5 1 23 1261 1284 1261 1284 0.97
22 26 1.4e-05 0.001 19.5 0.1 2 23 1312 1333 1311 1333 0.95
23 26 4.7e-05 0.0035 17.9 2.9 1 23 1339 1361 1339 1361 0.99
24 26 2.3e-06 0.00017 22.0 2.0 1 23 1367 1389 1367 1389 0.97
25 26 5.9e-08 4.4e-06 27.0 2.4 1 23 1395 1417 1395 1417 0.99
26 26 0.00073 0.054 14.1 0.3 1 22 1423 1444 1423 1447 0.91

Sequence Information

Coding Sequence
ATGTTACCGACCGATATATGCCGCACCTGTGCGCAGCATGATGTAAATTTGTTTCCGCTCTCTACGTGCACCGAGAAATATgcaaacaaaagtttctatGACATGTTGCATGATTTAACACAAAACGATcCCTTAATGGAACACTCAGATGATAATCTGCCCCAGTATTTGTGTGGCGACTGCTTGCATAAACTGGAAGAGGCATATGCATTTGTGTTGCAAGCTCGTCAGGTGCAGGAGCAACTGTTGCTCAAAATAAGCAAAGGCTTGCAGTGTCTGGATGAGACACCCATAGACATAGCATCGCAGCACATAAAGACAGAAGCCGACATGGCCTTGGAGCAAACCAATTATGGCGCCGATGATAAAGTTGCAACTGTGTCTCGGGCTGCTCTAAAGATGCAGCCGGAGAGTGAGAGCGACAGTAGCCAGGCAGACGTGGCTGATGATGATGTGCTGGATTTTAAGCCCACACAGCTGAGACGCAGCACTCGGAAGACAACACTTTGCGCAGACAGCGAAAATGAAGCAAAttgTGAAAATTTAACTGTAGTGCCGGTCAAGCGTCGTCGCGGTCGCCCTGCGCGTATTCCCAAAAAAGAAACCATCAACAAGGACGGACGACATGCGTGCGAGGTGTGTGGCAAGACTTTTTCTTGGCATCGCGACATGCAACGCCACGCTCGCATCCACTTTGAGCAGGCTGGCTACGTGTGTGACAGCTGTGGCAAGGGATTCCTCCGCAAGGACAAGTACACGTTCCATTTACGTTCGCACGAGAAGCGCCAAGCCAAGCGGCAGGCTTTGCAGCTGGGCAACGAATGGCGATTTGCGGAACGCCTGTACAGTTCAGGACGCCTCAAGCGTGTGGAGTGTAAGCTGTGCGAATTGAAGTGTCAGCGGATTCAGGAACTTCGTGAGCATCTGGCCAGCCATGTCAACATTGAAACATTGTCGAGTCTCAGCGTTAATAGCGATGTTATCCTGGAACAGTTTACCAGCCAGCAGCTGGACTTGATGCAGATTAAGCAACAGGTGTGTGCGGACATAGCCAAGGGAAGTGAACATCTGGATAAATACAGTGTGGTGGTCAATGCATATGGCTATGAACTCTGTCTGAGCGACTCTGACGAGGAGTTGGCAGGACTACCGCCTCCTTATCAATGCCTGGTTTGTAAAACTCACTTCTCACGCAAATATCGCCTGATGCGGCACACGCTGGAGGAGCACACTCAACCGACAGCTGTGACATCTCCTTGGCAACGTTGCAACTATTGTCAAATTGGCTTTGTGTGTGTCAAGCTTCTGGAACAGCATCAGCGCACACAGTGCCATAATCAGTTGAAACGTTATAGTTGTCCCAATTGTCCAGGCAAATTTATTTGGCGACAGAATCTGAAACATCATGCGTGCTCCCATCGCACGAGATCTTCAGAGGCACAGGATCAGGAGAGAAGTCTGGGCCGACAGATTCAGTGCTGCCTTTGCGATGAGCAACTAGAGAGTATGTCAGCACTACGTGCTCATCTAGTCACACACTGCGATGGACAAAGCGGCATTGATCCAGATCGAGGATCCACCTTCTTTCGTTGTAATCCAGATGGTTCCACCTGCAACCAGACGGAGCTCAGTATACGAATTGCGAGTGATTTTGGAGCAGAGGATTATGGTCGCTACTTCAATGCCTCCACAAGCAGCGGCCAGGAACTGGATTTCTTTGACTCTGATACGGATTTAAGCGATCaatcagctgctgctgtgcatTCGTGCACTTTGTGTGGCCAGAGCACACAACGCCTTGCCCTGCTGCTGAAGCATCAACAGAAAGATCACAGTGAGGTGATGGACACATTGCCTCATGTGTGTGACAAGTGTGGATTGGGATTTGTGGCTGAACCGCTGCTTCAGCAGCATCGTCGACGCATCTGTGCGAAGCGGCATGCAAAGTACCTTTGTCAACATTGCAATCTCCACTTTATCTGGCACTCGAACTACGAGCGACACATGGATCTACATCACGAAGCGGAGGCGGAAGCAGGGACAGATGATGTTCCTGATCGTGTGCCCAATACCAGACTAAGAAGCAAACGCCAACAAGCTGCCAAATTACAGTGCAATGAATGTGAAAAGGTCTTCATCTGGCCAAAGGATCTGACGCGTCATAAGCGCATTCATCAGCCGCAGGCATCGGCACAGTACGAATGCAGCTACTGTGAGCGCAAGTTTCATCGCAAGGATGGCCTTAAGTCCCATATGCGTGTTCATGGCGAGCAGCATTCAGATGCGACGGTTATGTCCAACAGCGATCCTGATCCGTCGATGTTGCAGCGGATGCCAATGGTGTTGACGCAATTGTGCCAACCAAATGGATGCAAGCTGATTCAATGCATGATCTGTCTCTCTCAGCACACGAAGATATCTGATCTGCGCACGCATTTGGTGAAGCATCAGTTTGTTGTGGAGTTTGCGGAGGATCGTGCCAGGCCGGAGAACATTGCTAGTATTTGCCGGTCCCTATATCCGGAGCTGGTTACTCCGTTGGATAAGCAACAATTGATTGATCGCATTCAGATTGATGTGGGCCTGGGCACTGAGTTGGAAAGATTCATTTCGATAACCAACGAGGCAGGCATTGAGCTTAGCTTAGATAGCAGCGAAACTGACTCAGATTCGGACTCGGCCGAAGTGGAAAGGATCAGCAGTGGACGACAATACAATTGTGATCTTTGCCGGTTGAAGTTGCCTCGTAAACATCAACTCTATGCCCATCAGCTGGAGCAACACACATGGCAACAGGCCACCCACATTTGTACCCACTGTCAGGCCAGATTCATCACTGAGCAGTTGCTGGAGCACCACTATCGTAGTCTCTGTCGCAATGTCCACAAGCGTTTCCTTTGTCGGAAGTGTCCATTACGGTTTCGTTGGCGTGACAACCTCAAGCTGCACACGGACGTGGCACATCAGGAAGCAACTGGAGAACAGACGAACTTGGGCATCCAATTAAATGGGGCAAGTCTACTCCCTGTTGTCAGCTACGATTGCAGCGAGTGTAATCGCAGCTTTAAAATGCAGAAGGATCTCACACGGCACACACTGATGCATGCCCAGGAGTCGAGCATTTATCGATGTCGTTGGTGTGCCCGTCGATTCTATCGCCAGGCGAATCTCCTGCAGCACATTGAGCGTCATGGCATCAATGCCACACAGCTGCCCTATGCCGAGTCCCTACTCAATGCCAGCCGTCATCCCCATGGTCAGAAATGCATTCAATGCAAGGTGTGTGATATACGTTTTCCCACAATTGCCGCACTGCGTTCCCATTTGGCGTCCACACCGAACGGGACTCATCATGAGATGGGATCGATGCTCAACTACTCGATTACTAACCAGCTGGGCTATGAGCTGCACTTGGAAGACTCGGAGACGGATGAGGAGGCCAAGCCGCCTGGAATACCCACACACTACACCTGCAGCATGTGTCAGCTGCGTTGTGTGCGGAAATATGAGctgcatcagcatcagcaggcCATGCATCGATTGGAACGGATTACCGAGGGCTGTGATCAGTGCATCTATAAGAGCGTTTCCCCGGATCTTATCGCCTATCATCGGCGTGTACAATGTTGCAACACGGAGAAGCAATTCAAATGCGTTAACTGTGGTTACAAGTTCATGTGGGAGTCGAACCTGCTGCTGCACATTCAATTGCAGCATCCTAGCAATAAACATCATGAGGAGGTGCCTGCTCCTGAGACACCCACTGTCGAGTGTCAGATCTTTCAGTGCGGTCAGTGCCCGCGTAAATACAATCGCAAGGATCGACTGACAGCCCATGTAAAGAAGTGTCATGCACCAGGTGCAGTTGATCCAACTGAGTGTCCAACAAAAACATCGACGTCTTCAAGTGTCTCCAAGCAACAGAAAAGTTTCCTTTGCGCCTTCTGCGGCAAGGCGGTGAGTTCCTCCTCTAATCTCATTATACACATACGTCGTCATACTGGCGAGAAGCCCTTCAAGTGCGACTATTGCGACATGGCTTTTCCCCGCTCGTCCGATCTGCAATGCCATCGACGCACCCACACTGGCGAACGGCCACATGTCTGCACCGTGTGCCAAAAGGGATTCGCCCGCTCCTACAAGCTCCAACAGCATATGCGCATCCATAACGGCGAACGTCCCTACAAGTGTACCTACTGCGACAAAAGCTTCACCCAGTCCAATGATCTGACACTCCACATACGACGACACACCGGCGAGCGACCCTATCAATGTGACACCTGCGGGGAACGCTTCATTCAAGGGACGGCCCTCAAGAATCATCGAATGCAGAATGGCCATTACGAGGCAGGGGATGGCCTAGCTAAAGTTAATTAA
Protein Sequence
MLPTDICRTCAQHDVNLFPLSTCTEKYANKSFYDMLHDLTQNDPLMEHSDDNLPQYLCGDCLHKLEEAYAFVLQARQVQEQLLLKISKGLQCLDETPIDIASQHIKTEADMALEQTNYGADDKVATVSRAALKMQPESESDSSQADVADDDVLDFKPTQLRRSTRKTTLCADSENEANCENLTVVPVKRRRGRPARIPKKETINKDGRHACEVCGKTFSWHRDMQRHARIHFEQAGYVCDSCGKGFLRKDKYTFHLRSHEKRQAKRQALQLGNEWRFAERLYSSGRLKRVECKLCELKCQRIQELREHLASHVNIETLSSLSVNSDVILEQFTSQQLDLMQIKQQVCADIAKGSEHLDKYSVVVNAYGYELCLSDSDEELAGLPPPYQCLVCKTHFSRKYRLMRHTLEEHTQPTAVTSPWQRCNYCQIGFVCVKLLEQHQRTQCHNQLKRYSCPNCPGKFIWRQNLKHHACSHRTRSSEAQDQERSLGRQIQCCLCDEQLESMSALRAHLVTHCDGQSGIDPDRGSTFFRCNPDGSTCNQTELSIRIASDFGAEDYGRYFNASTSSGQELDFFDSDTDLSDQSAAAVHSCTLCGQSTQRLALLLKHQQKDHSEVMDTLPHVCDKCGLGFVAEPLLQQHRRRICAKRHAKYLCQHCNLHFIWHSNYERHMDLHHEAEAEAGTDDVPDRVPNTRLRSKRQQAAKLQCNECEKVFIWPKDLTRHKRIHQPQASAQYECSYCERKFHRKDGLKSHMRVHGEQHSDATVMSNSDPDPSMLQRMPMVLTQLCQPNGCKLIQCMICLSQHTKISDLRTHLVKHQFVVEFAEDRARPENIASICRSLYPELVTPLDKQQLIDRIQIDVGLGTELERFISITNEAGIELSLDSSETDSDSDSAEVERISSGRQYNCDLCRLKLPRKHQLYAHQLEQHTWQQATHICTHCQARFITEQLLEHHYRSLCRNVHKRFLCRKCPLRFRWRDNLKLHTDVAHQEATGEQTNLGIQLNGASLLPVVSYDCSECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRQANLLQHIERHGINATQLPYAESLLNASRHPHGQKCIQCKVCDIRFPTIAALRSHLASTPNGTHHEMGSMLNYSITNQLGYELHLEDSETDEEAKPPGIPTHYTCSMCQLRCVRKYELHQHQQAMHRLERITEGCDQCIYKSVSPDLIAYHRRVQCCNTEKQFKCVNCGYKFMWESNLLLHIQLQHPSNKHHEEVPAPETPTVECQIFQCGQCPRKYNRKDRLTAHVKKCHAPGAVDPTECPTKTSTSSSVSKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCDTCGERFIQGTALKNHRMQNGHYEAGDGLAKVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00558059;
90% Identity
-
80% Identity
-