Basic Information

Gene Symbol
crm_1
Assembly
GCA_035042165.1
Location
JAWNLU010001213.1:319341-323671[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-08 3.4e-05 24.0 0.1 2 44 108 163 107 165 0.94
2 2 2.6 3.1e+03 -1.4 0.0 9 24 287 302 286 303 0.90

Sequence Information

Coding Sequence
ATGgaagacaacaacagcatgtGTAAGAATGTTAAATATGCAACCGAAGCTGTCGCCGTTGTTGCTCCCGAATCATCCACATACAATGGCAAGGGAGTTCAGATCAAGGTGGCCACCGTCAACACTGCGGAGCCGGAGGAGCTCCTTGGATCGGTGACCACACAAAATTGTCCGGGCACGCGTGCAAGTGCACGCGtcatacaaaaaatgaaactcGATTTGTCGCGTCCGATGACGCCGCCACCCACAGAACGGGAGCACAACAAAAAGGATGAGAAAGCCGCCCAAAAAACGCCCTCACAAATGCGGGCTGCCAGCAAAACGACCTGGACAAATGTGGAGCGAAATTGTTTCTTTGATGCGCTCAACGAGTTTGGCAAGGATTTTGAGGCGATCGCCAATTGCATCAATTCCAAGCTAAAGCGTCGCAATACGAGCAGCGATCATAGCTTTAAGAGCAAGGATCAAGTGCGACAGCATTACTATCAAACATATCATAAGATAAGCAAATATGTCCGCTTCACTGATGAGCTAAAGAAGCCCGCCCAAGAGCTGTACACGCTAATAAACTATGGTGAAATGCGTCGTAAGCTGCAGTTTCTAACGGAGAAACATTTCATGAAACTGAAGCAACTCATCTATCATGGTCACATCATTGTACGCTGCAAGGGCAAAAACATACGCATCAAGACACCTTCCTGCAGGGCTTTGCGTCGTCTCAATCAGCTCGATGATACACTGGAGGATATAAGGCTGCCCAGTAAAATAGAGGTGCTAGTAACGCCTTCAAATATGGAGGCATTTGGACGTGTTCAGGCTTTGGCACAGAATCCACGTGGACGCGCTATTGTGCCACTGCACAAGAAACTCATTAGCTTTATCAAAACGTTTGAGTACAAATGGCGCAGCGCTGACGCTCGAATCTCCGAGGAACAGTTGCTGCCCAGTGGCGCTGCCGGGATCATCGAAACACCCGATCCTCCGGTAGAGCCTTCCCTTTGCTTCCTGCCCAAGCCCGGCGTGCCCATACATCGTCCATTGCTGAACATTACGGCGCATCTGAGCAGTGTCAACATATGCCTTACCGCTTACGAGGAACGCTTGGGCGTCAAAGTGCGCAGCGAAACGCTGGAAAgcacagcagctgcagctgctgccagtGCAAAGCGTGCACGCACCGAAAGCGGTTCAGAAAAGCGTTCGCCAGAGGCCAAAAAGCTGAAGCCAACTTGCAGTCCGCCGCATGAGAAGACTTTGGATGAGCTAGTGGAGAGCAGCAATCCTGTTAAGGTGGAAAACGACAGCGCAGATGGACTAAGCGAGGAGATCAATGAGCTGCTCAGTCTGACGACCGAGGACGGAACAGTTACCACAAGCAGCGTTATCACAAATTtaacaacagttgcagttacagcacaaccaacagcagcaattgtaCCACCTCCCGTTGCTGCACCACCGCCGGCTCCAGTGCCAACTCGTACCAAGCGTAACGATGCCTTGGGCGCTGGCGGTAGTAAAGGCGGCAAGGCAGCGGCACGTAACTTTAAGCCACTGCTCAGCGATGAGGCTATCAAACGCATACGCAAAGGCTGGACCGTGTCAAGCTCGGCAGACATAACCATTGGCGATTTGTATGTTGTATTGGGACAGGACTCTAAGCTGGAACTCGAGTATTATTGGTGCGATGTTGAGCTGGGAACGGCGAGCAGCTCAACGGCCGTCAGTGCTTCCACCACATCCTCCACAACATCGTCAACATCGCTGCCGTACAATACTAACGACTGTGATAGCGCGGAACGCGTTAAGGCCATCACAACGGCCACGGTTAGCAATAAGTTAAAGCATCTGCTGCTCGTTGCCAATCTAAGCGAGCGTGTGCGTAAGCGTCAATGCAATTGTGGACACAGTTGTGATCGCAAACGCGATCTAATCACAAAGGCACAATGGCTCAGCAGCCTGGCAAATGGTACTGCTGGCCGTGGAGCAGGTGCTACAACATCCACAGATGGCAATGAGTCCATCTTTCGCACTCCCATGCTTCCCATGCGCCGCCCCATCACCAATATTATTGATCCAATGCGTCAATTGTCAAAACTCACGCGACAGAAGATGTCGCGCCATGTGCTGGTGCAACGCTGCATTCTGCCACCCGCATCCGATGTCTCACGTCCTTATGATGTGCTTAGTCTAAGCAATTTGCAAAATGGCCTCTTTGAGCCCATCGATCGAGTCAGCAGTAGTAGTAGCAATAGCAGTAGCAGCCTAATCAATTCTGCCTTAGCCATGCCCGTTTCTTCCAAGACTACCTCCAATACCAACAGCAaAGAGGAATCTATTCTACCCGCCGCTACAAGCACGACGTTACCCGAAGGCGCTCAAGACGAGGCCACGACGCAAAACTTTTTCAATGGCAGCGTCAGTCCGATGCATTTGCTGCGCGATTCCACATCCAATTCACGTTGGCTGGAGGATAACATCAATGACTTTTCGCTGACCAGCCTGCTGGGTCATCTCGACGATTTTGATGCCACACACGACATACTGGATCCTTCGTCGAGTCTGTCGGTGATTAGCGAAAGCAGCGTTGATTTTCGACACAAATTTCAGGAGATTTCGGCGCTGTTGCAACAGCAGGAGAAGGATTAG
Protein Sequence
MEDNNSMCKNVKYATEAVAVVAPESSTYNGKGVQIKVATVNTAEPEELLGSVTTQNCPGTRASARVIQKMKLDLSRPMTPPPTEREHNKKDEKAAQKTPSQMRAASKTTWTNVERNCFFDALNEFGKDFEAIANCINSKLKRRNTSSDHSFKSKDQVRQHYYQTYHKISKYVRFTDELKKPAQELYTLINYGEMRRKLQFLTEKHFMKLKQLIYHGHIIVRCKGKNIRIKTPSCRALRRLNQLDDTLEDIRLPSKIEVLVTPSNMEAFGRVQALAQNPRGRAIVPLHKKLISFIKTFEYKWRSADARISEEQLLPSGAAGIIETPDPPVEPSLCFLPKPGVPIHRPLLNITAHLSSVNICLTAYEERLGVKVRSETLESTAAAAAASAKRARTESGSEKRSPEAKKLKPTCSPPHEKTLDELVESSNPVKVENDSADGLSEEINELLSLTTEDGTVTTSSVITNLTTVAVTAQPTAAIVPPPVAAPPPAPVPTRTKRNDALGAGGSKGGKAAARNFKPLLSDEAIKRIRKGWTVSSSADITIGDLYVVLGQDSKLELEYYWCDVELGTASSSTAVSASTTSSTTSSTSLPYNTNDCDSAERVKAITTATVSNKLKHLLLVANLSERVRKRQCNCGHSCDRKRDLITKAQWLSSLANGTAGRGAGATTSTDGNESIFRTPMLPMRRPITNIIDPMRQLSKLTRQKMSRHVLVQRCILPPASDVSRPYDVLSLSNLQNGLFEPIDRVSSSSSNSSSSLINSALAMPVSSKTTSNTNSKEESILPAATSTTLPEGAQDEATTQNFFNGSVSPMHLLRDSTSNSRWLEDNINDFSLTSLLGHLDDFDATHDILDPSSSLSVISESSVDFRHKFQEISALLQQQEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00522897;
90% Identity
-
80% Identity
-