Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035042165.1
Location
JAWNLU010000975.1:2828448-2841786[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 2e+04 -5.9 2.7 12 41 75 102 64 109 0.42
2 3 5.2e-52 5.2e-48 163.4 0.1 24 186 396 555 375 567 0.91
3 3 2.6e-13 2.6e-09 36.9 0.9 188 222 630 664 624 665 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTTTCGCAAAATTCCGGCCTCTTGGATTTACAAAGCATATTTGATCCACAATATTCattgcaacaacatcaacaacaacaacatctatcatcacaacaacaacaacaattatcaCGCACATCAACGaaatttgatttaagcattttcaacgatttcgaccaaatggaattcaacaacaatttgaatcGAAACCATAATCAATATcagaataataacaataataataatagcatcaataataataataataataaccacaataccaccaacaacaacaacaacaccatacATACGCACCAGACCAACGGTGAAAATCTTAATCAAATCCAAAATCGTCATTTTATCAGCGGCtatcatcatcagcatatTGGATCGGATTATGAGCAAGTAATTAACTTTGTTGATTCACCACCAAACTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGAATCACCAGGACCACAAATAATCGACGTTAGGACTATTTACTCCAACAGCGGTTCACGCAAAAGACGAATGGATTGGGACTCATTAGATATCGGTCAAAGTGAAAATTCGCCGACAACACAAACTGGCGATTTACCCCATAAAGTGGCACATCACGAGAAAGATAAACACAAGCGGGAAAAGCATTCAGGTCGCAGCAGCTGGAGCGACGAAATAGGCTTCGATTTGAACGCAGAGTTTAATAGCAACTCGTATTTGAACAAtGAGAACTTTTTGTCGTTCTCCCCGAGCCTGACGGCACTGAAACAGGAGCCGCAAACGGAGCAGCTCAAACCGAATCCCAAGGAGTGCAGCAACTCGGCAACTGCCGTGATTAACATTGGCAAGATTGATAAATCGCCATTGGGTGACGCCAATCATTCACCACGTGGTGGGCAATCTCAATCGCAATCCCAGGAGGCAGGAAGTGCCAACAAAAATGAGTTGAACCCCGGGAATATTTGTGGTTGTGGCTCGCCGCAAGGCTCGCCCGCCGCAACGGACTTTGAACtgaatggcaatggcaatgccaatggaaatggaaatggaaatgcagtTGACAAAGGCAAATCTGCAGCTGGCAATGAGGCCTATGCACAGACGACACGCTCTGgattgcagcaacaactgagCGTTGTCGATGAGGCCAAAATCGAGCCGAGCTCCTCTGGCGGTGCAGCCCATGCTGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCAACGAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattgGAGATTTATCTTTCTATCGTGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGTCGCTTGCAGTTTATGGAACGGGAGCAGATGCAACAATGGCAAGCATCGCGTCCTGGCGATCGCATCATTGAAGTGGATGTGCCACTTTCGTATGGTTTGTGCCACGTGTCGCAGCCATTGAGTTCGGGCTCATTGAATACGGTTGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAGGTCAATTGCATATCAACGGAGTTCACACCAAAGAAGCACGGCGGGGAGAAGGGTGTACCATTTCGACTACAGATTGAAACTTATATAGAAAATACGTCAACAACTGGAAatagtggcaacaacagcagctcgagcagcagcagcagcagcaacaacagcaacaacagcaacagtagcaacaacagcaatacaacaactagcaataacaacaataataacagtaacaacaacaacaccattgCAATCACATCGCCTGGAACACCCGAGAATCGTACGGGCAATGGCAGCGGCAACATCGCCGGACTTGCCACACTCAACGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAGGTATTCAAGCTTAAAGGCGCCGATCGCAAGCATAAACAAGATCGCGAAAAGATCCAAAAGCGTCCACAGTCTGAGCAGGAGAAATTCCAGCCAAGTTACGAGTGCACCATTATGAATGATATATCATTGGATCTAAtaacgccaacaacaacaactacaggcTGCTACAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCAGTTCATATACCAAAATATGATGGGATGCTACCGTTTACAAGCAGCGCATCACCAGGGACCAGCAGCAGTCCAATTGCCATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCCACATATCCCAGCGGATATGGATGATTATAATCAGAACATAATGCCGGAATCAACGCCCGTACAAGTGACACAGTGGCTGACCAATCATCGTCTGACGGCCTACCTCACCACATTTGCCCACTTCTCCGGCGCTGATATTATGCGCATGTCGAAGGAGGATCTAATACAAATCTGTGGTCTTGCCGATGGCATACGCATGTATAATATTCTGCGCGCCAAaaCCATTGCACCTCGGCTGACGCTCTATGCCAGCATGGATGGCTGCAGCTACAATGCCATCTATTTGCTCTCTAATACGGCCAAGGAGTTGCAGCAGAAGATCTTCAAGTTGCCTGGTTTCTATGAGTTCATGGCCAAGGGCGGATCAGCTGGCTCATTGGAGAATGGTGGCGGTGTggcagctgccgctgctgccgccgcaCTCTACAACAATTGGGGCATGCAGTCAAAGTATTCGGGCAGCGGCTCGAACATATTCAATGAGGTCAACAAGAGTTGTGTGTATATTTCGGGACCATCGGGCATACATGTGAGCGTTACCGATGAGGTGCTCAACAATGAGGTCAAGGATGGCAGTCTCTATGCTCTGGATGTGCAGGCCGGCAaagttgttttaaaattgatcaatAAGCAGGATAACAATTGA
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSLQQHQQQQHLSSQQQQQLSRTSTKFDLSIFNDFDQMEFNNNLNRNHNQYQNNNNNNNSINNNNNNNHNTTNNNNNTIHTHQTNGENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDAQSKESPGPQIIDVRTIYSNSGSRKRRMDWDSLDIGQSENSPTTQTGDLPHKVAHHEKDKHKREKHSGRSSWSDEIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNPKECSNSATAVINIGKIDKSPLGDANHSPRGGQSQSQSQEAGSANKNELNPGNICGCGSPQGSPAATDFELNGNGNANGNGNGNAVDKGKSAAGNEAYAQTTRSGLQQQLSVVDEAKIEPSSSGGAAHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSGSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTSTTGNSGNNSSSSSSSSSNNSNNSNSSNNSNTTTSNNNNNNSNNNNTIAITSPGTPENRTGNGSGNIAGLATLNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLITPTTTTTGCYSPEYMKLWPNSPVHIPKYDGMLPFTSSASPGTSSSPIAINSVTSTNSPTLKLMDATNMVSPPHIPADMDDYNQNIMPESTPVQVTQWLTNHRLTAYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMYNILRAKTIAPRLTLYASMDGCSYNAIYLLSNTAKELQQKIFKLPGFYEFMAKGGSAGSLENGGGVAAAAAAAALYNNWGMQSKYSGSGSNIFNEVNKSCVYISGPSGIHVSVTDEVLNNEVKDGSLYALDVQAGKVVLKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
iTF_00601525;
80% Identity
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