Basic Information

Gene Symbol
grh
Assembly
GCA_035042165.1
Location
JAWNLU010001196.1:928642-960290[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 2e+04 -6.9 9.7 76 114 194 232 157 256 0.45
2 4 0.28 2.8e+03 -2.5 3.0 81 116 262 295 248 317 0.60
3 4 0.44 4.5e+03 -3.2 1.1 95 104 524 533 501 549 0.49
4 4 2.2e-63 2.2e-59 200.6 0.5 23 221 660 853 647 855 0.93

Sequence Information

Coding Sequence
ATGAATGAGGTGCGATGTCCAACGTTGAGAAACAAtgacaaacaacaattgcGCCCCGAGGATCGTCATTCGACCGTATCAAATGCTAAGACATTGCCCCGTCCACGTCTTCGACGCGGCGCCAGCAGCTACAACTTGGAAGCagagcatcatcatcatcatcagcagcagcagcaggaacatcatcatcatcattactATGAGACAGCCAAGGACGAGTTGCAGCACCTGCCACTGAGTGCCGCAGGCTTGCAGCAAACTCATGTGGCCAGCGAGATTCAACTTCTTCCACATCCGCCTCcgtctgctcctgctcctcctcctccgactgctcctgctcccgctgaagctgcaactgttgcccaAACAGACGGCACTGATTCAATCTCCGCCTCCTCCTATGCTGTTTATAGCTATTACCGGGATGTCGATGCTCAGCATGAGGAGGATTATCGTCAGCCGTGGAGcAATGCGAGCAGCGCCGGCAAACTAAATGGTCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGTCCGCCACAACCGGCGTTGtgtccacaacaacaatctcgaatcagcaacaacatcagcagcaacagcaacaacagcagcagcagcagcagcagcagcaacaacagcaacaccaacaacagcagcagcatcaacaacaacagcaacaacaacatcccaGCGACATTGTAACCATAACGACGGCGGGTGTGGGGAGTGCAGGCTCAATTGTCTCCGCTGccgtgcaacagcaacagcaacaacagcagcagcagcaacagcaacaacagcaacaacagcagcaacaacagcaacagttgctgagCATCAAACGAGAACCCGAAGACTTGAGCAAGGATCCCAAGAACGGCAACATTGGCGCCGCAGCAAACGGTGGCGGTTCGGTGATAACGCAGAAGATATTGCGCGTGGATGCCACCAGAAGTGAGGCACAAATTAGCGATAacacagctgcaacaacaacaacaacaacaacatcacctgaaaccacaacaacaacaactgtaatagaagcagcagcagcaacacgtgcaactgcaactgcaattagTCCCGCCAGTTCCACAGCCGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAGCAGCACTGGCGCCACACAGCAGAGCTCGTTGCAAGCGCAGAGTCCCAGTCCGGGTCCGTACATCACAACCGATAGCTATGGCATGTATACGGCCACCCGGTTGCCGCCCGGTCCCCCGCCCACAACGACCTTCATAACGGAACCCTATTACCGGGAATACTTTGCACCCGATGGCCAAGGTGGCTACGTTCCCGCTGGCTCCGCTCGCAGTCTCTACGGCGAGGATGTTTCCGTCTCGGCGTCGACGCAGGCGCAGCCCGTTGGAGGCGTTTATGAGGCGCGTTTTACGAGCAATGGGCCGACGACAACCACAGTGCTTACCAGCAGTAATGCACACCATcacagtcaacaacaacaacaacaacaacagcaacagcagcaacaacaacagcagcagcaacaacaagaacagtcGGTCAAAAACGGCGGTACACCTTTATATGCCAAGGCCATAACGGCAGCGGGTCTAACTGTGGATCTGCCGAGTCCCGATTCGGGCATTGGTACGGATGCCATCACACCGAGGGATCAGAATCACATACAGCAGTCCTTCGACTATACGGAACTTTGCCAGCCGGGAACCCTGATCGATGCCAATGGCAGCAGCATACCCGTCTCGGTGAACAGCATCCAACAGCGCACTGTGGTGCACGGCAGCCAGAGTAGTCCAACCACATCACTGGTGGATACCAGCACAAATGGTTCAACTCGATCGAGGCCCTGGCACGATTTCGGCCGTCAAAACGATGCTGATAAAATccaaataccaaaaatCTTCGCAAATGTGGGCTTTCGATATAATCTGGAGAGTCCCATTAGCTCGTCCCAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGGCAGTTCTATGGCATCACCTTGGAGTATGTGCACGATGCGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGCCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGACACAAAGAACTCAGTGGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTATTGGAATCCGCTCGAGAGCTCAGCCAAGATCAACATTGCCGTACAGTGTCTCAGCACGGATTTCAGCAGTCAAAAAGGTGTCAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTCGAGGATCCCCGAGATGCGACGGTCTTCCATAGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCGGAGCGCAAGACGCGCGATGAGGAGCGACGTGCGGCAAAGCGCAAGATGACGGCAACTGGCCGCAAGAAGCTGGATGAGCTCTATCATCCGGTGACGGATCGCTCCGAGTTCTATGGCATGCAGGATATGGCCAAGCCGCCGGTGCTGTTCTCGCCCGCCGAGGATATTGAGAagAGCTTCTATGGCCACGAGACTGACTCGCCGGAACTGAAGGGTGCCTCACCATTCTTGTTGCACGGCCAGAAggttgccacgcccacgctcAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAGAAGGATCACATATTGGATCAGAGCATGTTAACCAGCACACCCATGTCCGACTTTGGGCCACCGATGAAACGTGGCCGAATGACGCCCCCAACCACGGAGCGTGTCATGTTGTATGTGCGGCAGGAAAATGAGGAGGTCTACACGCCCCTCCATGTGGTGCCGCCCACCACAATTGGCCTGCTTAATGCGattgaaaacaaatacaaaatctcAACAACGagcataaataacatttatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGATATTTTCTTGCTGGAGGTGCAACAAATCGAGGATGACCTGTACGATGTCACGCTCACAGAGCTACCCAATCAGTAG
Protein Sequence
MNEVRCPTLRNNDKQQLRPEDRHSTVSNAKTLPRPRLRRGASSYNLEAEHHHHHQQQQQEHHHHHYYETAKDELQHLPLSAAGLQQTHVASEIQLLPHPPPSAPAPPPPTAPAPAEAATVAQTDGTDSISASSYAVYSYYRDVDAQHEEDYRQPWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISNQQQHQQQQQQQQQQQQQQQQQQHQQQQQHQQQQQQQHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNIGAAANGGGSVITQKILRVDATRSEAQISDNTAATTTTTTTSPETTTTTTVIEAAAATRATATAISPASSTADLEMYATTGGTQIYLQTSHQSSTGATQQSSLQAQSPSPGPYITTDSYGMYTATRLPPGPPPTTTFITEPYYREYFAPDGQGGYVPAGSARSLYGEDVSVSASTQAQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQEQSVKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSSIPVSVNSIQQRTVVHGSQSSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFANVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDMAKPPVLFSPAEDIEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
-
80% Identity
-