Basic Information

Gene Symbol
Ubp1
Assembly
GCA_018152535.1
Location
NW:6704880-6715450[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-54 2.8e-50 170.4 0.2 23 189 392 555 373 562 0.91
2 2 7.7e-14 5.6e-10 38.6 0.9 185 222 607 644 602 645 0.92

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAACTCCGGTCTGTTGGATTTACAAAGCATATTTGATCCACAATATTctcatcatcaacaacaacaacaaataccaCAACATTTGAGCCACCACCCCCAACATCACATTcaacaaaatcaacaacaaaatcaacaccaacaacaagcggAACAAATTCTACAACATCAACAACCACGCAACATATCAACAAAGTTCGATTTGAACATTTTCAACGAATTCGACCAAATGGAATTCAACAACAATTTAAATCGCAATCAAtatcaaaacaacaacaataatatcaaCAACAATCAGAATCATAACTCCAACACCAACAACACTAACAACAGTGTAAGTGAAAATCTAAATCAGATCCAGAACCGCCACTTCATCAGCGGCTACCACCATCAGCATATTGGTTCGGATTATGAGCAAGTGATCAACTTTGTTGACTCGCCGCCAAACTCTGAGGAATCGTGGACAGAGACCACCTCTTTAATCGAACAAATCACCATTGTCGTAGACGCCCAATCGAAGGATTCGCCGGGACCGCAGATCATCGACGTGCAAACCATTTACCTAAATAGCGGCTCACGCAAAAGACGAATGGATTGGGATTCCCTGGACATTGGCCAAAGTGAGAATTCACCAACAGCATCGCAGAGCGGCGAGCTGCCCACCAAAGTGGCCCATCAGGAGAAGGATAAACACAAGCGCGAGAAGAACTCGGGTCGCAGCAGCTGGAGCGATGATATTGGCTTCGATCTGAATGCCGAGTTCAACAGCAACTCGTACTTGAACAATGAGAACTTCCTGTCGTTCTCGCCCTCGCTGACCACCCTAAAGCAGGAGCCGCAGACGGATCAGGTCAAGCCCAGTCCCAAGATATCATTGGACAATGCCGCTGGTTCTCCCTCGGTGGCCATTGCCAAGCTGGATGAGTCCCAGAACTCTCCGCAACAGCCAAATCCTGGCCAGGAATTAACCCCTGGCTCTGGTTCGGCCAACGGCAATGGCAAGCACGATGTGAATTCGGGTCTTATCTGTGGCTGTGGTTCACCACAGGGCTCTCCAAGCAGTGAGTATGATGTGAACGAAAAGGGcgccaagcagcagcagctcagcGTTTTGGATCCGGCCAAGATTGAGCTTGTTTCGGCCAATGGAGCTACCCACTCCGAGGATCATAAATTTCAGTATATCTTGGCTGCGGCCACTTCGATTGCCACCAAGAACAACGAGGAGACCCTGACGTATCTCAACCAGGGCCAGAGCTACGAAATCAAGCTAAAGAAGATCGGCGACCTATCCCTCTACCGGGATAAGATATTGAAGAGCGTGATCAAGATCTGCTTCCATGAGCGCCGCCTCCAGTTCATGGAGCGCGAACAGATGCAACAATGGCAGCAATCCCGCCCAGGCGAACGCATCATTGAGGTGGACGTACCGCTATCGTACGGCCTGTGCCACGTGTCCCAACCGCTCAGCTCCAACTCGCTGAACACCGTCGAGATCTTCTGGGACCCGCTGAAGGAGGTCGGCGTCTACATCAAGGTCAACTGCATTTCAACCGAATTTACCCCAAAGAAGCACGGCGGCGAGAAGGGAGTGCCCTTCCGACTGCAGATTGAAACCTATATAGAAAACACAAACAGCACCAATACTGGCGTTTCTGCTGCCGGTTCCGGTCTAGGATctgctggcagcagcagcagcaacaacagcgccagcaaCGGCGGCAGTGGTAACAACACCAACGGCACAACCAGTGGCTCGACAGCTCCAGCATCACCGGAACGTTCGCCCAATGCTGGCGGACAGGCCAAGCAGGCGGTCCATGCCGCTGCATGCCAGATCAAGGTTTTTAAGCTAAAGGGCGCTGATCGCAAGCACAAGCAGGATCGAGAGAAGATCCAGAAGCGTCCGCAATCGGAGCAGGAAAAGTTCCAGCCCAGCTACGAGTGTACCATCATGAATGACATATCCCTGGATCTGGTGATGCCTGCCACTACCACTGGCTGCTACAGTCCCGAATATAATGGAAAATCTGAAAAGTTGAAAGATGCCCAAGTGCCGCGCATTCGTGAACATGCGCTTGCATTTGAAGGATCGTCGCTCCTGCCAACGTCAGATACTCAACGAGCTACACTGGATTTTATGAAACTCTGGCCCAATTCGCCCGTACATATACCCAAGTACGATGGGATACTTCCGTTTGCCCCAAGTGCAGCTTCGCcggccaccagcagcagcagccccatTGCCATCAACTCGGTGACATCGACCAACTCACCGACTCTGAAGCTAATGGACGCCACCAATATGGTATCGCCGCAGCATGTGCCCGCCGACATGGACGATTATAACCAGAACATCATGCCGGAATCGACGCCCGCACAAGTGACGCAGTGGCTGACCAATCACCGCCTCACGGCCTATCTCTCAACTTTCGCACACTTCTCGGGAGCGGATATTATGCGcatGTCCAAGGAGGATTTGATACAAATCTGCGGCCTGGCCGATGGCATTCGCATGTTCAACATTTTGCGCGCCAAaaccATTGCCCCTAGGCTTACGTTGTACGCCAGCTTGGATGGCTGCAGCTACAATGCCATCTACTTGCTTTCGAACACGGCCAAGGAGCTGCAGCAGAAGCTGTTCAAGATGCCTGGTTTCTACGAGTTTATGGCCAAGGCCAGTGCCCAGGAGAACGGAGGAGGAGGTAGtgctgccgctgcagctgcgGCTGCCCTGTACAACAACTGGAGCATGCACTCCAAGTACTCGGGCAGCGGCTCGAACATCTTCAACGATGCCAACAAGAGCTGCGTGTACATCTCGGGGCCGTCGGGCATTTTGGTCAGCGTCACCGACGAGGTCCTCAACAACGAGATCAAGGATGGCAGCCTCTACGCCATGGAGGTGCAGGCCGGCAAGGTGATCCTCAAGCTGATCAACAAGCAGGACAACAATTGA
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSHHQQQQQIPQHLSHHPQHHIQQNQQQNQHQQQAEQILQHQQPRNISTKFDLNIFNEFDQMEFNNNLNRNQYQNNNNNINNNQNHNSNTNNTNNSVSENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTETTSLIEQITIVVDAQSKDSPGPQIIDVQTIYLNSGSRKRRMDWDSLDIGQSENSPTASQSGELPTKVAHQEKDKHKREKNSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTTLKQEPQTDQVKPSPKISLDNAAGSPSVAIAKLDESQNSPQQPNPGQELTPGSGSANGNGKHDVNSGLICGCGSPQGSPSSEYDVNEKGAKQQQLSVLDPAKIELVSANGATHSEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSTNTGVSAAGSGLGSAGSSSSNNSASNGGSGNNTNGTTSGSTAPASPERSPNAGGQAKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLVMPATTTGCYSPEYNGKSEKLKDAQVPRIREHALAFEGSSLLPTSDTQRATLDFMKLWPNSPVHIPKYDGILPFAPSAASPATSSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTNHRLTAYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGGGGSAAAAAAAALYNNWSMHSKYSGSGSNIFNDANKSCVYISGPSGILVSVTDEVLNNEIKDGSLYAMEVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
iTF_00608945;
80% Identity
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