Basic Information

Gene Symbol
XBP1
Assembly
GCA_018152535.1
Location
NW:16866168-16868389[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-14 2.4e-11 43.1 16.7 2 65 76 139 76 160 0.82

Sequence Information

Coding Sequence
ATGGCTCCCACCGCGAACGCAGTGCTGATAACCGTGCCGCGGACAGCCATCACATCGAATACGCTACCCAAACTGCGCCCCGCCCCCCTGACGGCGGCCCTGCTCAAGGCCTCCTCGCCCACTCCCTCGAGCTCGGGCTACGCGTCCTCCTCCAACATGGACGACGAGACCCTGTCGACGGTGCCGCCCAAGGCCAAGAAGCGCCGCCTGGACCACCTCACCTGGGAAGAGAAGGTGCAGAGAAAGAAGCTAAAGAACCGAGTGGCCGCCCAAACCTCGCGCGACCGGAAGAAGGCTCGCATGGAGGAGATGGAGTACGAGATCAAAGAACTCACAGACAAGACGGAAATATTACAGAACAAGTGCGACAGTCTGCAGGCCATCAACGAGTCGCTGTTGGCCAAGAACCACAAGCTCGACTCGGAACTGGAGATCATGCGCCAGGAATTCGCCGagctgaagcagcagcagcagcagtacacGGCCAAGAGCATCGCCGCCACAAACAACCAGAGCACCAGCCAATCCAACGCCAGCGTAGGCGCTGAGGGCTGTGCGTCCACAATCCTTGGATGCAGCATCCAATGCTGACCCTCTGCCGCAGGGTACACAACAAGTGGACACACAGTCGTCAGCGCGTCTGCTGGCGGAGCAGCTGAAAAGCAGCCGGAGCCTGACATCACTCTGGAAGGTTGTGGCGCTTTGCCTTCTCTACAAGACATGCTTGGCGACGACGAAGAATTCGACGTCAAGCGCCTCGAAGAGCTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACCTGGAGACAGGCGCTGGAGCGAGCAGCCCAGCTGCTGCCCAAGATGCAGGCGACGCAGAGCGACTGCCTGGACCAGTGGTGGGGTCCGCAGCAGAGCGCCTGGAATCCGGCGGGCATAGAGCTGATGGCCTGAGTAATGCCGAAGCACCCCTGGAGCACTGTCACAGCCTGAATGTGCAGGTGTTGGAGGTAAATGGAAACCCCCAGCAAAAAGCGACAGCGCCAGcctcgacgacgacgacgacagccaCAATCACAGCTACAGCGGCCGCCTCACTTCTGCAGGCAACACCGGACACAGTGTACGGCACCTATGATGCCAAGACGAACTCCATTACCATTGTGATGGACGGCGATGCGGTGCCGGTGAACGAGGCCGTCGAGGAGATCTACTGCGACGGCGTCACCGCTGGCGACGAGGATACGACGGACGTGATCATGAAGTGTCCGCCGCCAGCGACGTCACCGTCGCAGGTCTACCTGAACGTGGTGAACGCCACCGAGGACGACTCGGACGACGAGAGCAGCTTTGATCCCATCCAGCGCTTTCTCTGTCCGCGTGTCAAGGCGATCTCCCCACTGGCCAAATCCCCCGCATTGTCTCTCCACTCGGCCACCTCGGATCACGGCTACGAGTCCATACTGGGCTCCCCGACATCCACGGCCCTTACTCTGCCCATCGACGAGGAGGATTTCCCCTGGCAGAGCAACTTTGACGAGCTGTTCCCCAGCTTGATATAA
Protein Sequence
MAPTANAVLITVPRTAITSNTLPKLRPAPLTAALLKASSPTPSSSGYASSSNMDDETLSTVPPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCDSLQAINESLLAKNHKLDSELEIMRQEFAELKQQQQQYTAKSIAATNNQSTSQSNASVGAEGCASTILGCSIQC*PSAAGYTTSGHTVVSASAGGAAEKQPEPDITLEGCGALPSLQDMLGDDEEFDVKRLEELAESLLADITADLETGAGASSPAAAQDAGDAERLPGPVVGSAAERLESGGHRADGLSNAEAPLEHCHSLNVQVLEVNGNPQQKATAPASTTTTTATITATAAASLLQATPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEEIYCDGVTAGDEDTTDVIMKCPPPATSPSQVYLNVVNATEDDSDDESSFDPIQRFLCPRVKAISPLAKSPALSLHSATSDHGYESILGSPTSTALTLPIDEEDFPWQSNFDELFPSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00607562;
90% Identity
iTF_00489129;
80% Identity
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