Basic Information

Gene Symbol
Hivep2_1
Assembly
GCA_037075305.1
Location
JBAMCE010000553.1:2708223-2716264[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0001 0.0068 16.9 0.9 1 23 230 252 230 252 0.98
2 8 0.00031 0.021 15.3 2.8 1 21 258 278 258 282 0.89
3 8 0.011 0.7 10.5 0.2 1 19 909 927 909 930 0.93
4 8 3e-06 0.0002 21.7 2.0 1 23 1660 1682 1660 1682 0.99
5 8 1.3e-05 0.00083 19.7 5.3 1 23 1688 1712 1688 1712 0.92
6 8 0.002 0.13 12.8 2.7 3 23 2198 2218 2197 2218 0.93
7 8 0.00086 0.057 14.0 1.2 1 23 2224 2248 2224 2248 0.91
8 8 0.0027 0.18 12.4 2.7 1 23 2269 2293 2269 2293 0.92

Sequence Information

Coding Sequence
ATGACGCTACAGCATGTGGCAAGCAGCGCAACGAGCGTGGCCACAACaaccaccagcaacagcaacagcagcaacatcagcagcagcaacatcagcaacaacaacaacagcgatgatgcggccacagcagcagcagcagcaacagtagctGGCGACTGGAAAACTTCAAACAATTTGCGctatttgcacaaaaagttTAAGCGTCTGGCCAGCACCACCGAACCGGAAACGGGCGATGCGCTGCGCACCACATCGCTCTCATCCAACAGCTCGTTgtcaccgccgccgccgctttaTAATGGACATGtgacacaacagcagcagccgcagcagcagcagcagcaggcggggCCTTTGCTGCCGGCTAGCAATGAATTCAGTGCCAATTTCgtaaatgccaacaacaacaacagccatgatgagagcaacaacaatagtaaaaatattgctgttgctggtgcgcCCAGAACACGGACACCGcttagcaacagcagcaacatcagcaacaacagcaactatgCCAGCAATGCGACACTGTCGCCAGCAACATTCgcacagcatcagcaacagacgcagccaacaacagcagcaacaacaaccacaacagcggcaactgccacaccaccagcagcaacagcaacaacaacggcaacaacagcaacaggtcTGGCCGAGAAAATGGGTCGTTATGTCTGCCCGTATTGCAATCTGAACTGTACAAAGCCCTCGGTGCTGCAGAAGCACATACGTGCCCATACCAATGAGCGGCCGTACCCGTGCGAGACCTGCGGCATTGCCTTCAAAACGAAGAGCAATCTCTACAAACACTGCCGTTCACGTTCCCATGCGGCGCGCGTGCGCGGTTTCGATGTGCCCGCCCACGAGGCGGACGGACTCTCCGATCAGGATGGCGACGGGGAGCTGAGCAACAGTAGTTCCGAGCTGTTGAGCTTGGAAGTTCTGAGCCGTGCGGATTCGCCATATGACGAGCCCATGGCCTCGCCTACGCCCTCGCCATCCACGCTGTCCGCCGCGAAGAGCGCGTACTTGCAACAGCCGCCACTGCCGCAGCAcatgcaacagttgccgctggGATCGCCCGCTGCCGGAACACTGCCGCCCGCCACAGCCGATACGCTGCACTCGGCGACAGCGCAGCATCGCCAGTCGATTGACTACAAGCCGTACAAACCCAAGTTTCACAATGCGGCGCTCTACGCGCCCGGCAGCAgcaaagagcaacagcagcaacagcaacaacagcaacaacaacagcaacagcagcaactgcaacaacaaaagctgcccCCGCCGCAGCCAACGCTGGTGCATCCCACGCTCTCGCTGAGCACACAGCTGAAGCTCAACAATCACATCAACTCGCATCAGGTGCAGTTGCAGCgacagctccagcagcaacagcagcagcaacaacaccaacagcaacagcagcagcagcaacaatcgcTGCTGATGGCTGCCGCAAATCCTGCTAATCCCGTTGTACTGCCCGCTTtggtgccgccgccgcaactGCCCACGGGCGTCTATTATATGGGACAGCCGCAGTATTATAatccaactgcagctgcaatacATCAACATGCGCTCGCCATGCAGTTCCAGCAGCactttcagctgcagcagcagcagcatcaacagttccagcagcagcagcaacaccatcaacagcagcaacagcagcagcaacactcgCCGTTGCTGAAGGcgccccaacagcagcagcaacagccgcagcaaacACCGCCGCccccgcagcagcaacagCTGGTGCGCTCCAATAGTCAAcaggcagcgacaacagcgacccctgccacgcccacgcccacagccaATCTGGGCAGCTttgccagcggcagcggcggcatgCAAGTGAATGTGGAAAAGGTGCAGGAGCACATCTCGAAGCTGATCTCACAGAACGAGGCCATAGTCGAAAACAAGGAGATACTGCTGCAGAAGAAGTATCCCAAGCAGCTGAGTCGCTCGCGAAGCTtcaacaatgccaacaacaacaacagcggcaacaacaacaacaacagcagcagcaacagcagcaatcagacggccaacagcagcaacagcagcagcagcggcaacagtcaGCAGCTGGGCGAGACAAAGGTGAATCTGGCACAGGCCATAGTGctcaaacagcagcagcagcagcaacaacagcaacagcagcagctgcaacaacagctgcaacagcagcaacaataccaAATGtacatgcaacagcagcagctgatgcagcTAGAGAGTGTCAATGGACTGCTCAagcgtagcagcagcagcagcggcagcgccgcCTATCCAGGACTcaaagccacgcccacgctgCCAGCAACGCCCACGACGAATGTGAAGCTGCAAcaactgccgccgccgccgtcgccttTGCCGCTGCAAACGCTGCAATATCGTCAGGATCCCGCAACGCCGGTGCCCAAgctagagcagcagcagcaaccgctcAATCACTCCCAGCCCCTAAATCTGTCCGCCAAACCGAAGCTAGCGATGCCCCcaaaaccagcagcaacagcaacaggaacaacagcagcaacagcaactgttgctgccgtgcCGAAGAGctcagcaactgctgctgcggcgccgCCGAACAATTCAATTATCaagaatttgttgttgaatgCGCGCGGCCTGGCCGTGCCCATCGGCGAGGGCGACGATGCCGTCTACTCCTGCCCCATCTGCGCCAACGAATTCCGCAGCGCGGACGAGCTGAAGCACCACAACAGCACCTATTGCCAGGATGCGAACAGCAGTGCGACGATTAGTCCGGCCTCATCGCCCAGCCGGAAATACTTCCGCTCCAACTCCAAGTCGCTCAGCCTGCCAGAGCTCATGTGCGACATGGCCAACTCGAAGAATCCACTCTCCCTCGCCAAGCTCGCCTGGTCGCAGCTCAAGATCAAGCCCAGCACCGTGGTGCTCAGTCGGCTCAGTGCGGCGCAGTCGCCAGCGCGCACCTcgacagcaactgcaacaacaactgcagctgcagtcagcagcagcagcaacaacccgCCAGCAAcagtcacagcagcagctgtcgtAATCCCGCCCAGCATAGATCCCGGCAGCAGCGTCTCGCTGCGCTTTGTGGACGCGCCGCTGCCCTCGCCCGGCCcgctgctgggcaagaccCCGCTGGTGGACTACGCGGCGCCGCGCAAAGCGCCCGATGCCCAGGTGGTCATCACCAAAATGCACGAGGATCGGCTGGAGAACATCATCATTGAATCGCCGCCTGCGAAGCGGCCCAAGCTTAGCGACATTGCCATCGCGAGCAGCCTAAGCGGCAAGGCCTTTGCGCTGCCCGCGGGCGTGCAGCTGTTCCTCGGCGGCAATCAGGAGTTGCCATTGCCGGGCGCCTTTGGCGGCGGCAAGGAGGAGCGTTTGCGTCGATTCACCTCCTCCGGTGGCAGCATGATTCCCATCTCCGAGTGCCCCGAGCTGGACAAGAGTCCCAAAATGATACGCACCCCATTGCTATCGGGCGGCAGCTTCCAGGAGATGTCGCCGCGCCTCAGCGAGACCAAGGAGCGCAAATTGCCGCTGCCCGTGCCTAACAATGGCTATCTgctcgccagcagcagcagcagcaacaacagcaacacgccgcaacattttcagtttcCGCCCATCAGCTCGATAACTGCCTTCAATCCTCTCACGCTGCCGccgatgagcagcagcaacaaccatgTTGCGGATGCCCACAAGCCCATACCGTATGTTCCCGGCATACCGGGTCCGGGTAgcctgtcgctgctgccgccgccaccgcagcagctgcagctgcagccgcgcGGACGCAGTCCCAATCGCAAGCAACCGagtcccaatcccaatccttTGCTGCTGGATGCGCCGTTAAAGGCGCTGTCGCCGTTCGGCGGCGTACAGAATTTGCCCAGCGAATTCAGTCGGCAGCCGCCGACGCCCGCGCAGCGTCAGGCGCTGCAatggagcagcaacaacagcaacagcagcagcagcaacaacaacaagacggcagcaacagttgccgccgtGGACGTGAAGAAGGCGCCCTTCAACTTTCTGCGCATGGCGGACAACgtgaaggagcagcagctggcacagGAGGTGCGACATTTCAATTTCGACAACGTGCACAAGACGCAGGAGGCGCTGGCGCCGCTGCACGTCGACACGCCTGaggaggcagcagcaacatctggaacaacagcagcaacatctgcagcagcagcaacagttgccacgcccagctcGGCCAAGTCGAAATTCCTGCGACCTACCAGCCTGCCGCTCAAGCCGGGCACCTTTACGCCCAAGCGTCATCATGGCATCACGCCGACAGCGAACACCCTGCCCCTGATCTCGCCCGAGACGCCGCGCCCCTCCAAGTCGTGTGTGCAGCTCTATTTGAATGGGCACGCCTACACGTATCTGGGTCTCAAGTCAAGCACAAAGATGTTCTACTGTACAGTGAACTGTCCGCAGCCGTCATATGTCGCGGGCATGCACAAGCTGTCCATGTACAGTGTGTGGCAGGTGTGCGAGGAGAACCAGCCGCATCCGTTGGGCTTCAAGCCCAGACAGGTGATGGCCCTCTACGATTCCAGGCAGAAAATGCTCGGCTTCGGCTCGACCATGTCGATGGCGGGCACAGGCGCCGGCAAGCTGCACTACGCCCTGGTCAGCTCACAGCAGACgatcagcagctgctcgacgacGGTCAACAACCAGAGCAAGTTCTATCAGCACCAGCCGAAGCAGCCGCCGACCTCGATCGGAGCGCTCAGCGAGGCGAATGTGGCGGCCAAGGCCAGTGAGGAggacgctgccgccgccgccaagaAGCTGGAGTCGGGCCAACTGCTTGTCGGTGGCTATGAATCGCACGAGgattacacatacatacgcggACGTGGACGCGGCCGGTATGTGTGCTCCGAGTGCGGCATCCGATGCAAGAAACCATCCATGCTCAAAAAGCACATTCGCACCCACACGGACGTGCGTCCGTTCACCTGCAGCCATTGCAATTTCAGCTTCAAGACCAAGGGCAATCTGACCAAGCACATGCAGTCTAAGACGCACTTCAAGAAATGCATCGAGCTGGGCATCAATCCTGGTCCCATGCCCGCCGATGGCGAATTtctcgatgtcgatgtcgagtTCGATCAGCAGTCGTCAACATCCGCTGGCGGACGCACCTCATCCATGGCCGGCGAGTCCGATTCGGATGATTACAGCGACAACGAATCCGAGAGCAGCGaCACAGATGAGTCGAAGTCGCGCATGAAGGAGCATGAGGCGGCGCGCGGCCTGCTCTCGCTGTCCATGACACCGCCCATACCGCAAAGCGTATCGCCGTATCCCGCACAACTGCTGGAGGCACCCGGCCCGGCGGCCAGTCCGGCGAACAGCATTGGCTCCTCGGCGGGCAGCGCTGCGGGCGGTTCGCAGCCAAAGCGTCAGGTTTGCTCGTTTACCTCGCCCAAGCCGCCCTTCGACTACCAGAAGCAGGAACAGTATTACTCCAATCCGGAGGAGTCCAAGCCGAAGCGTGACGTGCCCAACGACGAGAGCAGCGCGCCCATGGATCTGACCAAGCCGCGTTCCATGCAACACATTCTACCCGcttcatctgctgctgctgctactgcccAGCCGTTGGAGCAGACACTGCCCAAATCGCAGGCACAGCAGATGCGCGATGTGATCTTTGGTGCGGGCAACAACGAAAGCGGCTTCATGAAGACGCTGATTTCGGTGTCCGATAAGGTGCGCATCTCCGCCGAAATGGAGGAGCAGGCAAAGCGCGAGAGCGAAGGCGACGATCTGCTGCTACAGACCTACATCAAGGAGCAGGCGCTGCAGCATGCCAAAATGAAGCAGAGCCAGTTCAGTCGCAACTACCTGATGATGACCAgctccaacagcagcaccacctCCGTCACttgcaccaccagcagctcTGCCGGCACGCCcatcgtcagcagcagcagcggaagcCCGCCGAAGCCGGCCATCAGCATCACGGAGCTGCCCAGCATTGAGGTGCACGAGGTGCAGGAGATCCAGGTGAAACCCGAGCCGCCGGCCGTGGTTCAACTGCAGCTGCCCGAGGAGAGCGAGCCATGTGAGGCACAAGCGGAGCGGGAGCAGCCAGCCATAGcagttcctgctgctgctgtatctGTCGCCAAAGGCAGCACGGAGCTAGTCATGCCGCAGCCGTCGACGCCACACAATGCCAATCTGCCCGCTGCAGTGCAGCAGCCGGATGCCACCGATTTTAGCGGTGTGctaagcaacagcaataacagcctGGCAGGAGGCAGTGGATCCGCACGCACTGTCATCGTCGGCGAGGAGGGCTTCAAAGCGACGCCGCCAACGAGCAGCGCACAGGAACTCCAATCCATCCCTGCTGTAGCTGCTCccgctccagctgcagctacagctgctgCCGCGCCTGCACCTGGCAGCTATCCGGGGCGTGTAGTGCCGCCTCCACCGCCGCCAATTGCCAGTGATGCGCGGCCCACGTGCATCATTTGCAGCAAGACGTTCCAGCGGCAGCATCAGCTCACCCTGCACATGAACATACACTATATGGAGCGAAAGTTCAAGTGCGAGCCGTGCAGCATCTCGTTCCGCACACAGGGTCATCTGCAGAAGCACGAACGCTCCGAGGCGCACAAGAACAAGGTGATGATGACGTCCACATTTGGGGTGCCGACCACTTCGAATCCGCGTCCGTTCGAGTGCACAGATTGCAAGATCGCGTTTCGCATACACGGCCATCTGGCCAAGCATTTGCGCTCCAAGACGCACGTCCAGAAGCTGGAGTGCCTGCAGAAGCTGCCATTCGGCACCTATGCGGAGATCGAACGCGCCGGCATCAGCCTGACCGAGATCGATACCAGCGACTGTGAGAATTCCCTGATATCGCTCAAGCTGCTCGCACAGAAGCTGCTCGAGAAGGATCCGAATAAGCTGAGTGGCTATACAACGCCCTCGGGcatgctgcagctggccaCGGATACGCCAGCCGCCGGCCAGGACAGCGCCAGCGAGGATGGCTTTAGTGCGGCGAACAGTGCCGCGGCCTCGGCCATTGCCTCACTGGACAACGACAGCGCAGGCAATACGCCCAAGCGCGCCAGCTCCATGTCCGAGGATGAGACGCTCACCAACGGCCTGAGCCATGGGCACAGCCTCAAGCGTCGTCGTCTGCCGGgcagcagcttcagcagcaACGGCGACGAGAGCGACAATCCGCCGGAGACGacgggcagcaacagcatcgaGAAGCGTCCGAGGAGCAATACAAATGAATTGTCGCTGCCGGTGGCCACGCCCAGCAACTGA
Protein Sequence
MTLQHVASSATSVATTTTSNSNSSNISSSNISNNNNSDDAATAAAAATVAGDWKTSNNLRYLHKKFKRLASTTEPETGDALRTTSLSSNSSLSPPPPLYNGHVTQQQQPQQQQQQAGPLLPASNEFSANFVNANNNNSHDESNNNSKNIAVAGAPRTRTPLSNSSNISNNSNYASNATLSPATFAQHQQQTQPTTAATTTTTAATATPPAATATTTATTATGLAEKMGRYVCPYCNLNCTKPSVLQKHIRAHTNERPYPCETCGIAFKTKSNLYKHCRSRSHAARVRGFDVPAHEADGLSDQDGDGELSNSSSELLSLEVLSRADSPYDEPMASPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPATADTLHSATAQHRQSIDYKPYKPKFHNAALYAPGSSKEQQQQQQQQQQQQQQQQLQQQKLPPPQPTLVHPTLSLSTQLKLNNHINSHQVQLQRQLQQQQQQQQHQQQQQQQQQSLLMAAANPANPVVLPALVPPPQLPTGVYYMGQPQYYNPTAAAIHQHALAMQFQQHFQLQQQQHQQFQQQQQHHQQQQQQQQHSPLLKAPQQQQQQPQQTPPPPQQQQLVRSNSQQAATTATPATPTPTANLGSFASGSGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLSRSRSFNNANNNNSGNNNNNSSSNSSNQTANSSNSSSSGNSQQLGETKVNLAQAIVLKQQQQQQQQQQQQLQQQLQQQQQYQMYMQQQQLMQLESVNGLLKRSSSSSGSAAYPGLKATPTLPATPTTNVKLQQLPPPPSPLPLQTLQYRQDPATPVPKLEQQQQPLNHSQPLNLSAKPKLAMPPKPAATATGTTAATATVAAVPKSSATAAAAPPNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKHHNSTYCQDANSSATISPASSPSRKYFRSNSKSLSLPELMCDMANSKNPLSLAKLAWSQLKIKPSTVVLSRLSAAQSPARTSTATATTTAAAVSSSSNNPPATVTAAAVVIPPSIDPGSSVSLRFVDAPLPSPGPLLGKTPLVDYAAPRKAPDAQVVITKMHEDRLENIIIESPPAKRPKLSDIAIASSLSGKAFALPAGVQLFLGGNQELPLPGAFGGGKEERLRRFTSSGGSMIPISECPELDKSPKMIRTPLLSGGSFQEMSPRLSETKERKLPLPVPNNGYLLASSSSSNNSNTPQHFQFPPISSITAFNPLTLPPMSSSNNHVADAHKPIPYVPGIPGPGSLSLLPPPPQQLQLQPRGRSPNRKQPSPNPNPLLLDAPLKALSPFGGVQNLPSEFSRQPPTPAQRQALQWSSNNSNSSSSNNNKTAATVAAVDVKKAPFNFLRMADNVKEQQLAQEVRHFNFDNVHKTQEALAPLHVDTPEEAAATSGTTAATSAAAATVATPSSAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKSSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKPRQVMALYDSRQKMLGFGSTMSMAGTGAGKLHYALVSSQQTISSCSTTVNNQSKFYQHQPKQPPTSIGALSEANVAAKASEEDAAAAAKKLESGQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRMKEHEAARGLLSLSMTPPIPQSVSPYPAQLLEAPGPAASPANSIGSSAGSAAGGSQPKRQVCSFTSPKPPFDYQKQEQYYSNPEESKPKRDVPNDESSAPMDLTKPRSMQHILPASSAAAATAQPLEQTLPKSQAQQMRDVIFGAGNNESGFMKTLISVSDKVRISAEMEEQAKRESEGDDLLLQTYIKEQALQHAKMKQSQFSRNYLMMTSSNSSTTSVTCTTSSSAGTPIVSSSSGSPPKPAISITELPSIEVHEVQEIQVKPEPPAVVQLQLPEESEPCEAQAEREQPAIAVPAAAVSVAKGSTELVMPQPSTPHNANLPAAVQQPDATDFSGVLSNSNNSLAGGSGSARTVIVGEEGFKATPPTSSAQELQSIPAVAAPAPAAATAAAAPAPGSYPGRVVPPPPPPIASDARPTCIICSKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMLQLATDTPAAGQDSASEDGFSAANSAAASAIASLDNDSAGNTPKRASSMSEDETLTNGLSHGHSLKRRRLPGSSFSSNGDESDNPPETTGSNSIEKRPRSNTNELSLPVATPSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00617119;
90% Identity
iTF_00506344;
80% Identity
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