Basic Information

Insect: Drosophila kanekoi
Gene Symbol: -
Assembly: GCA_037075305.1
Location: JBAMCE010000577.1:10880096-10882925[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00033 0.022 15.3 1.8 1 23 307 329 307 329 0.99

2 8 2.4e-06 0.00016 22.0 0.8 1 23 334 356 334 356 0.98

3 8 1.2e-07 7.8e-06 26.1 0.2 2 23 365 386 365 386 0.97

4 8 7e-07 4.7e-05 23.7 0.3 1 23 392 414 392 414 0.98

5 8 8.7e-08 5.8e-06 26.5 3.9 1 23 420 442 420 442 0.98

6 8 3.2e-07 2.1e-05 24.7 1.9 1 23 448 470 448 470 0.98

7 8 7e-06 0.00047 20.5 5.1 1 23 476 498 476 498 0.98

8 8 0.00023 0.016 15.7 0.5 1 21 504 526 504 527 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00033	0.022	15.3	1.8	1	23	307	329	307	329	0.99
2	8	2.4e-06	0.00016	22.0	0.8	1	23	334	356	334	356	0.98
3	8	1.2e-07	7.8e-06	26.1	0.2	2	23	365	386	365	386	0.97
4	8	7e-07	4.7e-05	23.7	0.3	1	23	392	414	392	414	0.98
5	8	8.7e-08	5.8e-06	26.5	3.9	1	23	420	442	420	442	0.98
6	8	3.2e-07	2.1e-05	24.7	1.9	1	23	448	470	448	470	0.98
7	8	7e-06	0.00047	20.5	5.1	1	23	476	498	476	498	0.98
8	8	0.00023	0.016	15.7	0.5	1	21	504	526	504	527	0.94

Sequence Information

Coding Sequence: ATGAACGTACCCTCAAACGCAATGGGCTTTAAGCATGCAATGCTGCAGCGCAGCTACGAGCTGGCCGCCTCACCTGGCCCCCAGCTGCCggcgccgccaccgccgcaaGTCACAGACTTTAGCATCAATCGCATACTGAGCAAGGATCAGGCTAATCGTGTCAAGAAATCAACAACAAGTGCTTGCAGCATACTGGATCTCTCCAAGAGTCGTCAACAGACGGGCACAGTTGCtccaccagctgctgctgcttctgctgctcctccaACTGTTCCAGTGCCAGCTCTCAATCTGGCGCCCGTTCAGCTTCAGCCGGCCGCTTATGTGGCCGGCGGCTATGCCATGCTACCGCCGGATTTGCTGGCCATGGCCAGCGCAACCAAATTCTATGCGCAATTCTTTCCACATTTGCTGCCCGCCtatgcagcggctgcagctgccgccggcCTGACAACGCCGCCCACCTCGCCATATCAGCAaacccaacagcaacaacaacaatcatcacaacagcagcagcagcacaagcgCTACTTTGCGCCCTATGTAATCAACAGGCAGAGTCCAAGATCGAGTGCATCCACTGTCTGCTCACGCGCCGATTGCCTGGAATGCCTCGACTActacaaacaatttgttggcgGCTACAAGCCGACGCCACCTTTGATATCGCCGGCGGCCTCCTCGGtgagcagctccagcagctgcaggccaGCGGCACGTGATCTGCTGCTCAGCGccgcgagcagcagcagcagcaccaacaacatcaCCGGCAACACCACCAACATTTCATTAACCACGGTGACCAATCTGCATCTGAGCACAGCCACGACAACTGCCTCGACGACGTCCTTGACCATGTTGCCCAAGTTAAATGCCGCCGGCGGAAGCAGTTGCGCCGCCGAGGAGATCAGCTACAAGTGCCGCATCTGCGACAAAGTCTTTGGTTGCTCCGAAACGCTGCAGGCGCACGAGAAGACACACAAATCACCGCGCTACGAATGCTCCGACTGTGGCAAAGGCTTCTCACAGCTGCGTAACTATAAATATCACTTATCCGTGCATCGCGGCACCAAAGAGTTTGCGGCCGAGTGTCCGGAATGTGGCAAGACGTTCAACGACAAGGGCTATCTCAGCAGTCACATGAAAATCCATCGGAATCGCAAGGAATACGAATGTCCATATTGCCCGAAATCCTTCAATCAGCGTGTCGCCTTCAACATGCACGTACGCATCCATACGGGCGTCAAGCCGCACAAGTGCGCCGAATGCGGCAAACGATTCTCCCGTAAAATGCTGCTCAAGCAGCACATGCGCACCCACAGCGGCGAGAAGCCGTATCAGTGCTCCGTCTGTGGCAAATCCTTTGCGGATCGCAGCAACATGACACTCCATCATCGCCTGCACTCGGGCATTAAGCCCTTCAGCTGTCCGCTGTGCCCGAAGGCTTTCACCAAGAAGCATCACCTGAAGACGCATCTCAATTATCACACGGGCTGCAAGCCCTATGTCTGTCCACATCCCAATTGCAATCAGGCCTTCACCCAGTCCAGCAATATGCGCACCCATGCCAAGAAATGCCAGTATAGACCGTTAGACGGCGCTCAGGCATTTCCGGTGCcgtccaagcagcagcagcagcagcagacattGTCCCTGGGCACAGCTCCCAGTTTCGTCATGCCCCCGCCAAcgtttgctgccgctgcatcCGCTGCATTTCCGCCCGCTCAGCAAACGCTGCTCAGCAATTTGAGAAAATTCTAG
Protein Sequence: MNVPSNAMGFKHAMLQRSYELAASPGPQLPAPPPPQVTDFSINRILSKDQANRVKKSTTSACSILDLSKSRQQTGTVAPPAAAASAAPPTVPVPALNLAPVQLQPAAYVAGGYAMLPPDLLAMASATKFYAQFFPHLLPAYAAAAAAAGLTTPPTSPYQQTQQQQQQSSQQQQQHKRYFAPYVINRQSPRSSASTVCSRADCLECLDYYKQFVGGYKPTPPLISPAASSVSSSSSCRPAARDLLLSAASSSSSTNNITGNTTNISLTTVTNLHLSTATTTASTTSLTMLPKLNAAGGSSCAAEEISYKCRICDKVFGCSETLQAHEKTHKSPRYECSDCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHMKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCAECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYRPLDGAQAFPVPSKQQQQQQTLSLGTAPSFVMPPPTFAAAASAAFPPAQQTLLSNLRKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00506258;
90% Identity: iTF_00506258;
80% Identity: -