Basic Information

Gene Symbol
esg
Assembly
GCA_008042475.1
Location
VNJM01000989.1:204314-206267[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.7e-06 0.00053 20.3 3.7 1 23 279 301 279 301 0.99
2 6 6.8e-06 0.00054 20.3 3.7 1 23 356 378 356 378 0.97
3 6 9.6e-07 7.6e-05 23.0 0.6 1 23 391 413 391 413 0.98
4 6 3e-08 2.4e-06 27.7 0.4 1 23 417 439 417 439 0.97
5 6 3.4e-08 2.7e-06 27.6 2.1 1 23 445 467 445 467 0.98
6 6 4.5e-06 0.00036 20.9 0.4 1 21 473 493 473 494 0.95

Sequence Information

Coding Sequence
ATGGATAAACTCAAGTACAGCCGCTGTCCGCTCAAGAAGCGTCCGATAATGGTGGAGGAGTCCTGTCAGGAGGATCACTTAAGTCTCGACGAAGGACCCGTGGACTTGAGTGTGGCCTCTGCAGCTGTTCCCCTGGAACCGCATTGGTCGGCGAAAGCGGAACCGGAACCGCAGGCCGTACCCCCAGAGCTGAGGCGTCGCTTCGACGCGGCCATGAATCAGACCAAGGAGCAGCTGGCCCGTCGCATTTGGGAGGAGACCCGGGAGATAGCCCGTGCCTTTCCCGATGTCTTCACCCGCGAAGAGATCGCGAAGAGCCTGGCGCGCTTGGGTTACGGCGAATTCGAGCTGCCACCGGAGGAGGAGGTAATGGAGCCCGAAGCAGATCCAGAACCCCAGCCTGAGCCAGAGCACCAAATTCCGCTGAGCTATGCCAGAGAGACAGTCCCCACCGTGATTAAAGTAGAGCCCACCGAACAGGACTTTCCCCTGCGGAACTACAACAATAATCTGCTCAAGAGCATAGCGGAGTACGAGGACTGCATGAAGATGCAGCCGATCAAGGAGGAGATGGTGCCTGTGCCACAGCCGCCGATGTACTATCCACCGCCCACTCCGCTTGCCGAGCCCGAGGATCTCTCGGTGACCCAGAGGCGGGTGCTCAGCGAGAACATGAACCTACAGAATGTGGCCAGAGCTCTGCTCAGCATGCAGCACATGGCGCCACTTCCGCATCCGCTTCCGCATCCTGTTCTGCCGCCACAGGACATGGAAGAGGACCAGGAGAATCAGGACCTCAATCCGCTGAAGATCAAGAGCAGCAACGACCTGTACTACCAGTGCCAGCAGTGCAACAAGTGCTACTCCACCTATGCCGGCCTGGTGAAGCACCAACAGACCCACGCCTACGAGAGCACCGAGTACAAGATCATCCGGAGCCAGCCTGGGGGATCGGGCCCCATAGTGGACCAGACAGAGTTCTGCACAGACCAGGCATCGGCCTTGATCCAGGCGGCCAATGCCGCCTCGGCTCAGAGCATGCAGAAGCCGGTGGGCGTGCCACGATACCATTGCCAGGACTGCGGCAAGAGCTACTCCACCTACTCCGGCCTGTCCAAGCACCAGCAGTTCCACTGCCCCTCGGCGGAGGGCAATCAGGTGAAGAAGGTGTTCAGCTGCAAGAACTGCGACAAGACCTACGTCTCCCTGGGGGCCCTCAAGATGCACATTCGCACCCACACGCTGCCCTGCAAGTGCCCCATTTGCGGCAAGGCCTTCTCGCGACCCTGGCTCCTCCAGGGGCACATCCGCACCCACACGGGCGAGAAGCCCTTCAGCTGCCAGCACTGCAACCGAGCCTTTGCCGACCGCTCCAATCTCCGGGCTCACATGCAAACCCATTCGGATGTGAAGAAGTACTCCTGCCCCACCTGCACCAAGTCCTTTTCCCGAATGTCCCTGCTGGCCAAGCACTTGCAGAGCGGCTGCCAGAGCGAGCAGAACGGCGGCCCGGGCGGATCGTCCAGCGGTGGCttcgaccagcagcagctgcagcagcatctccaGGGCTACGAGGAGGGTCACAATCCCCACCAGGTCTACTATGCCGGCAGCgtgggcagcagcaacggggaggaggaggaggccggCGACTACcccatgccgccgccaccagccttatattaa
Protein Sequence
MDKLKYSRCPLKKRPIMVEESCQEDHLSLDEGPVDLSVASAAVPLEPHWSAKAEPEPQAVPPELRRRFDAAMNQTKEQLARRIWEETREIARAFPDVFTREEIAKSLARLGYGEFELPPEEEVMEPEADPEPQPEPEHQIPLSYARETVPTVIKVEPTEQDFPLRNYNNNLLKSIAEYEDCMKMQPIKEEMVPVPQPPMYYPPPTPLAEPEDLSVTQRRVLSENMNLQNVARALLSMQHMAPLPHPLPHPVLPPQDMEEDQENQDLNPLKIKSSNDLYYQCQQCNKCYSTYAGLVKHQQTHAYESTEYKIIRSQPGGSGPIVDQTEFCTDQASALIQAANAASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQSEQNGGPGGSSSGGFDQQQLQQHLQGYEEGHNPHQVYYAGSVGSSNGEEEEAGDYPMPPPPALY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00486734;
90% Identity
iTF_00602776;
80% Identity
-