Basic Information

Gene Symbol
-
Assembly
GCA_008042475.1
Location
VNJM01001531.1:14117-18407[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.0009 1 9.5 0.1 21 45 805 827 794 828 0.85
2 2 0.00018 0.21 11.8 0.1 23 44 1079 1102 1066 1104 0.83

Sequence Information

Coding Sequence
ATGAACACTACGGGAGGCAGCGATGTGGCGCTGGTGAAAGCGTCAACGCCCTCGCCCTTGCCGCTGGCCAAAATGGATGTGGACTTCTCGGGTTCCAAGTTCGAGATGCATGCATCGCTTTCGGAGGAGGAGCGCCGCTTCTACCTGAAGGTGTACCCTAACGTGGACATTGTAAACCAGCGCAAGGTACACTGCACTGTGTGCCGCCTGCACCTGGGCACTGCCCCCGCCTCCGAGAACAACATCAAGATGCATCCCATTCTGCGCGTGACGCATTGCGTCAAGTGCCACGACTTCTACAACAGCGGCGAGTTCTCGAAGGGCGAGGATGGTTCGGAGCTGTACTGCCGCTGGTGCGGCCAGGGCGGCGAGGTCTACTGCTGTTCCACCTGCCCGTACGTCTTCTGCAAGTCGTGCATCGTGAAGAACCTGTCCAAGGGCGTGATCGTGGACATTGAACAGAACGAGCACTGGAATTGCTTCAACTGCACGTCCAAGATTCTCTGGCCCCTGCGGGCCCAGCACTGGGCGCTGGTCAACTACATACAGTCGACGAAGAAAGCTATACAGGCTTCGCAGCTGCCCGAGCTAGAGGCCCGTCGCCAAATGCTTAGGgacagcagcaactgctgccGCCTGGCCAAGTCGAAGGCCACCAGTCTCTCGGACTCCATGGAGAGCCTGGAGTCCAGTACATCGAAACGCAGCGTGGGCAGCGCGACGAACGCGGCCAAGAGAACACTACAACCCCCAAAGCCGAGTCAGGGACCGACAGCAAAACGCCCCAAATCCTCCAACGCCGAGGTTGTGTGTACACCCGATCTGCTCAGCATGTTGGAGCCGGACTGCCAGATCTCTATGCTACCCAAGCCGCCAGGCCGTCAGCCGCCGGGGCCGCCGTCTAGTATCACAACTACCCCAAGGATTGTTACCGTCCAGCAGAATTACACGGGACCtagtcccagcagcagcaccagcaatgGAAGTGGCTCCTCCCCCTCGATGGGAGCTCCACGCAGCACCTTGCCACCGCCATTGGTGCTAAGTGGCTCGGGTATTCGCTATCGCCAGACTTCACCTGCCGCCGTCACCAGTGTGCGACGCACTGTGGTGCCCAATGCGGTGAGGAACAGCGGCCCCGTCTTCCACACCATCAATGGGTTCCGCGTGGATCTGAACAGCGCTGCGCAACAGGACTCCTACCGCCTGCCCAACGGACGCTTAATCCAAGTGAAACGCCAGTTGCCGTTGCCAAATCAATCGGCGCCAACGTCGCCGATGGTCGTCCCACCCATGAACCCGGGTGTAGTCATACGCGCGCGAGCACCGACTCCACTCGGCAGGCCGCAGATGCAGGTGGGCAACAACATGGGCATCTACAATCCGCAGACTAATCAGCAACAGCGGGCACCGCAAATTGTGCGGATTAATCAAAATCAGGCGgcaactccatctccatcaCAACATGCCCCAGCGCCGAATGTcaatggcggcggtggtggtggtggcagtgGTGCAGGTGGTGCTGGTAGTggcggtggtgctgctgcttctgctcctgctggtggTGGTCAGACCCTGATGATTACCCCCGTGCCCGTTCCGGCCAAGACTCCCAGTCTGGTGCGTCACAATTACCCGAACACATCGCTGGGTCAGGCACGATCCCAGCTGCAGGAACAGATCTTCAGCGCCATGGACATTTGTACACATCTCACCGGCAAGGTGCTGTCCCTTACACACTCGAATGCGTACAACCAGGTACGCAACTATCTGGATCTCAAGGAGTTGTACATCCACATGTCCTACCTGATGACCTACGCGATCGGGCGCTTCAAGCACCTGCAGGAGAAGTGTCTGGTGGATATGCGGGAGATGGGCTTCAAGAACGATGCTAATAGTTTGGAGAACGGCCAACTGGCTGCCGCCGTTGACTACGTTTGCTATGGCCAGCTGGACGATGTGGATCTATTCAATACGGGCTGCAACAGTTTTCATAATCAGGTCTATGAATATCGCAAAAGCTTGCATGCCAATCTAAAGGAGGGCGAGGAATGCGAGCCACTTCCGCCACTAATGCCGCTCGGAGTTCGGGCTGAAGGCGATCCCATCGATGAGGaggaacccgaacccgaaccagAGTTGGAAccagaacaaaaacaagatgCTGAGGATAACAAGGACAACGACGAGGCAAATGACTTTGATTACGATGAGGCGGAGGACTTGGATGATGATTTGGACGATGACGATCTGGATAACGAGGAGTGCGGCGAACTGGGCACCGAGGAGAGCATGAATCGTAATGAACAGGCTCACGCCTACGATCGGAAGTTGACCCGACTGCTCCGAGAATATCCCTCGCTCTGGTGCACCCGTCATCCGGACTATGGCAAAAAGGAGGTCACCCTCAAGCAGTGGCGCGTAATTGCCACCCACTTTCCCCGCGGCGACGACATTAAGCTGCGATGGAAAAACGTTCGTAAGCGGTACGTGCGGATCGAGCGGCGGGTGAAGCAGGGAAAGCGCTTCAAGGGCTATTTCGACAAGGCCACCAACTATTTGGCCAACAGGGATCGACCGAGAAGCGAGTGGTTGGCGGTGGACTGTGGCGAagacgatggcgatggcttCGAGCGCAAACAACTGGATGTCATTGAGAACACCATGGAACACAAGGAGCAGAAGGCGTATACGCCAGGCAAGCCTAAGCCACGTCTTCCCATGCGACCCCTCGAGGTGCGTGCCATCGATCAGCGCATTATCACCTTCGCCAAAAGCCATCCCGTGCTCTGGCGCAAGTCCACCGATCCGGAGTTCAACAGTATTGACGAGCAGACGCGGAAATCGTTGTGGCAAAACTTCTGGAGGTCGGCGCCCAATTATGCCTGCGAATACCTCGTGGAGCGCTGGCAGCAGATGTACGAGATGTACAAGTCCTTCCGCCTCAAGAGCATCAAGGACAAGGGCATTTTTGCGAATCTCGAGCTGAAGTACTCCAAGTACTTGGCCAGCTTGTATTTCCTGTACAAGATCGATGAGCAGGATCTGCGCGACGAGTTCGAGCCCTTGCAGGATTGCGTTCCCAATGGCAGCGATGTGGCTGGAAAGCTCAAGGACATGCCCGACGACAAGCAATTCGCACAGCAACTAGTGCTGGCCATAAGGGCATATCCCACGCTTTGGAATCCGAGGCATGCGGACTACGGCGACGTGGCGGCCAGGGAGCGACTGTGGCCAGAGGTGGCGCGTAGGCTGCCGCGTTTCAAGCGGGATGCCAAGGTCTGCAAGCTGcgctggcaaatggcaaagttTGCCTATGAATGCTACTGCCGCGAGGTGGAGCGCAAACCGACGCGGGCCAGCGAGCAGAGCCTGCAGAAGTTGCGAGCTAGCTTTCCGCTGGAAGAGATGAGCTTCCTTAGCACGTAG
Protein Sequence
MNTTGGSDVALVKASTPSPLPLAKMDVDFSGSKFEMHASLSEEERRFYLKVYPNVDIVNQRKVHCTVCRLHLGTAPASENNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEHWNCFNCTSKILWPLRAQHWALVNYIQSTKKAIQASQLPELEARRQMLRDSSNCCRLAKSKATSLSDSMESLESSTSKRSVGSATNAAKRTLQPPKPSQGPTAKRPKSSNAEVVCTPDLLSMLEPDCQISMLPKPPGRQPPGPPSSITTTPRIVTVQQNYTGPSPSSSTSNGSGSSPSMGAPRSTLPPPLVLSGSGIRYRQTSPAAVTSVRRTVVPNAVRNSGPVFHTINGFRVDLNSAAQQDSYRLPNGRLIQVKRQLPLPNQSAPTSPMVVPPMNPGVVIRARAPTPLGRPQMQVGNNMGIYNPQTNQQQRAPQIVRINQNQAATPSPSQHAPAPNVNGGGGGGGSGAGGAGSGGGAAASAPAGGGQTLMITPVPVPAKTPSLVRHNYPNTSLGQARSQLQEQIFSAMDICTHLTGKVLSLTHSNAYNQVRNYLDLKELYIHMSYLMTYAIGRFKHLQEKCLVDMREMGFKNDANSLENGQLAAAVDYVCYGQLDDVDLFNTGCNSFHNQVYEYRKSLHANLKEGEECEPLPPLMPLGVRAEGDPIDEEEPEPEPELEPEQKQDAEDNKDNDEANDFDYDEAEDLDDDLDDDDLDNEECGELGTEESMNRNEQAHAYDRKLTRLLREYPSLWCTRHPDYGKKEVTLKQWRVIATHFPRGDDIKLRWKNVRKRYVRIERRVKQGKRFKGYFDKATNYLANRDRPRSEWLAVDCGEDDGDGFERKQLDVIENTMEHKEQKAYTPGKPKPRLPMRPLEVRAIDQRIITFAKSHPVLWRKSTDPEFNSIDEQTRKSLWQNFWRSAPNYACEYLVERWQQMYEMYKSFRLKSIKDKGIFANLELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCVPNGSDVAGKLKDMPDDKQFAQQLVLAIRAYPTLWNPRHADYGDVAARERLWPEVARRLPRFKRDAKVCKLRWQMAKFAYECYCREVERKPTRASEQSLQKLRASFPLEEMSFLST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480108;
90% Identity
-
80% Identity
-