Basic Information

Gene Symbol
cnc
Assembly
GCA_008042475.1
Location
VNJM01000485.1:352714-368590[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-16 3.6e-13 49.4 4.5 3 62 754 813 752 816 0.93

Sequence Information

Coding Sequence
ATGGCGGAGCAGCGCGGCCGCGACACCGAcagaggcaGTGAATACATTCGCTTGCCCCTTGATGAGTTGTTGAACGACGTACTCAAGCTCTCTGAATTCCCGCTCGAAGACGAGTTAACCAACGATCCGGTGGCCTCCACTTCGCAGGCAGCCGCTGCCTTAAACGAGAACCAAGCCCAACGGATTGCTTCGGAGACCGGTGAGGATTTCCTCAGTGGCGAGGGAGTACCAAGCAAGCAGCGTCGCATCGGTGCCGAGAACAAGGACAATAACGATCAGGACAAGGCCGACGGAGATAGCTTCTCGGTGAGCGACTTCGAGGACCTTCAGAATTCCGTGGGCTCGCCCCTGTTCGACTTAGATGAGGACGCCAAAAAGGAGCTAGACGAGATGTTGCAATCCACGGCTCCGCCCTATcaccatccccatccccaccACGGTCATCCCCACGCGCATCCGCATCCCCATAGCCACCACCATGCGACGATGcaccatgcccatgcccatcatgccgccgctgcagccgccgcccaCCAGCGTGCGGTGCAGCAGGCAAACtatggcggcggcgtcggtgTGGGCGtcggcgtgggcgtgggcagcGGCACGGGCAGCGCCTTTCAGCGGCAGCCAGCTGCCGGCGGATTCCATCATGGCCATCACCAgGGCCGCATGCCGCGTCTGAACCGCAGCGTTTCCATGGAGCGTCTTCAGGACTTTGCCACCTACTTCAGCCCCATTCCCAGCATGGTGGGCGGTGTGTCGGACATGCCCCCATACCCTCACCACTATCCGGGCTACTCTTACCAGGCGAGTCCCTCGAACGGCGGTAATCCGTCGGCTGCCGGCCAACATGGTCAGTATGgcggtggagctgctgctgccctgcagccgccaccaccaccgccgccgccgcatcaTGCGGCCATGCTGCATCATCCGAACGCCGCTCTGGGCGACATCTGCCCCACGGGCCAGCCCCATTATGGCCACAATCTGGGCTCGGCTGTGACCTCCAGCATGCACCTGACCAACTCCAGTCATGAGGCCGATGGCGCAgccgcagctgccgccgcctatAAGGTGGAGCACGATCTGATGTACTATGGGAACACCTCCTCGGACATGAACCAGGCCGATGGCTTCATGAACTCCATTTTCACGGATGAGGATCTGCACTTGATGGACATGAGTGAGAGCTTCTGTCGCATGGTGGacaacagcaccagcaacaactcCTCGGTTTTGGGTCTGCCCAGCAGCGGACATGTCAGCAACGGATCTGGCAGCTCTACTCAACTGGCGGCTGGCAATCCGCACGGCAACCAAGCCAACGGTGCGGCCGGCGGCGTCGGCCCAATGAGCGGCTCTGTGGTGGGCACCGGACCAGCGGGCATGACCACCGATCTACTGGCCAGCGGCGGTGCAGGTGCACAGGGTGGCACAGATCGTTTGGACGCCTCCAGCGACAGTGCTGTCAGTTCAATGGGTTCGGAGCGTGTGCCGTCCCTCTCCGACGGCGAGTGGGGCGAGGGCAGTGACTCGGCTCAGGATTATCATCAGGGCAAATACGGCGGCCCCTATGACtttagctacaacaacaactcgcGGCTAACGGCCGCCACACGCCAGCCACCGGTGGCGCAGAAGAAGCATCAGCTGTACGGCAAGCGGGATCCGCACAAGCAAACGCCGTCCGCTCTACCGCCCACAGCACCGCCGGCGACTGCAACTGCTGTCCAGTCGCAGAGCATTAAGTATGAGTACGATGCCGGCTATGCCTCCTCGGGAAtggccagcggcggcggcatcagtGAGCCAGGAGCCATGGGACCGGCTCTGTCCAAGGAATACAATCATCACCAGGCCTACGGCATGGGAGCCAGCGGTAGCGGCTTCTCCGGCGATTACACAGTGCGTCCCTCGCCGAGAACTTCCCAGGATCTGGTGCAACTGAACCACACTTACTCACTGCCCCAGGGCAGTGGCTCACTCCCCAGACCCCCGGCGCGCGACAAGAAGCCCCTGGTGGCAACCAAGACCGCAACGAAGGGAACGAATGCTGACTGCAGTTCCAGCAGCAGTGccggtggcagcagcagcagcagcaccttgGAGGACGAGCACCTGACACGCGACGAGAAGCGCGCTCGATCTTTGAATATACCCATTGCCGTGCAGGACATCATCAACCTGCCCATGGACGAATTCAACGAGCGGCTGTCCAAGTACGATCTGAGCGAGAACCAGTTGTCGCTAATCCGCGACATTCGCCGACGCGGCAAGAACAAGGTGGCCGCTCAGAACTGTCGCAAGCGCAAGCTGGACCAGATTCTGACCCTCGAGGACGAGGTGAATGCAGTGGTGAAGCGCAAGACGCAGTTGAATTCGGACCGCGATCACTTGGAAGGCGAGCGCAAGCGTATCTCGAACAAGTTTGCATTGCTGCACCGTCATGTGTTCCAGTATCTGCGTGATCCCGAGGGCAATCCCTGCTCGCCTTCGGACTACAGTCTGCAGCAGGCTGCCGATGGATCCGTTTACTTGCTGCCCCGAGACAAGACCGAGGGCAACAGCACAGCCACGGCTGCCTCCAACGCTGTGTCGTCTGGCAGCGGCCATAAAGAGTTTAACACTAAACTAGGCTAG
Protein Sequence
MAEQRGRDTDRGSEYIRLPLDELLNDVLKLSEFPLEDELTNDPVASTSQAAAALNENQAQRIASETGEDFLSGEGVPSKQRRIGAENKDNNDQDKADGDSFSVSDFEDLQNSVGSPLFDLDEDAKKELDEMLQSTAPPYHHPHPHHGHPHAHPHPHSHHHATMHHAHAHHAAAAAAAHQRAVQQANYGGGVGVGVGVGVGSGTGSAFQRQPAAGGFHHGHHQGRMPRLNRSVSMERLQDFATYFSPIPSMVGGVSDMPPYPHHYPGYSYQASPSNGGNPSAAGQHGQYGGGAAAALQPPPPPPPPHHAAMLHHPNAALGDICPTGQPHYGHNLGSAVTSSMHLTNSSHEADGAAAAAAAYKVEHDLMYYGNTSSDMNQADGFMNSIFTDEDLHLMDMSESFCRMVDNSTSNNSSVLGLPSSGHVSNGSGSSTQLAAGNPHGNQANGAAGGVGPMSGSVVGTGPAGMTTDLLASGGAGAQGGTDRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQGKYGGPYDFSYNNNSRLTAATRQPPVAQKKHQLYGKRDPHKQTPSALPPTAPPATATAVQSQSIKYEYDAGYASSGMASGGGISEPGAMGPALSKEYNHHQAYGMGASGSGFSGDYTVRPSPRTSQDLVQLNHTYSLPQGSGSLPRPPARDKKPLVATKTATKGTNADCSSSSSAGGSSSSSTLEDEHLTRDEKRARSLNIPIAVQDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNAVVKRKTQLNSDRDHLEGERKRISNKFALLHRHVFQYLRDPEGNPCSPSDYSLQQAADGSVYLLPRDKTEGNSTATAASNAVSSGSGHKEFNTKLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00565125;
90% Identity
iTF_00565125;
80% Identity
-