Basic Information

Insect: Drosophila kambysellisi
Gene Symbol: salm
Assembly: GCA_035042185.1
Location: JAWNLS010000864.1:1058063-1069163[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.2e-06 0.00036 20.9 0.9 1 23 521 543 521 543 0.98

2 7 1e-05 0.00072 19.9 2.1 1 23 549 571 549 571 0.98

3 7 0.017 1.2 9.8 1.5 2 23 974 995 973 995 0.98

4 7 7.3e-08 5.1e-06 26.7 0.5 1 23 1001 1023 1001 1023 0.98

5 7 0.00023 0.016 15.7 2.3 1 23 1033 1055 1033 1055 0.98

6 7 0.03 2.1 9.0 2.9 2 23 1477 1498 1476 1498 0.97

7 7 2.9e-08 2e-06 28.0 1.3 1 23 1504 1526 1504 1526 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.2e-06	0.00036	20.9	0.9	1	23	521	543	521	543	0.98
2	7	1e-05	0.00072	19.9	2.1	1	23	549	571	549	571	0.98
3	7	0.017	1.2	9.8	1.5	2	23	974	995	973	995	0.98
4	7	7.3e-08	5.1e-06	26.7	0.5	1	23	1001	1023	1001	1023	0.98
5	7	0.00023	0.016	15.7	2.3	1	23	1033	1055	1033	1055	0.98
6	7	0.03	2.1	9.0	2.9	2	23	1477	1498	1476	1498	0.97
7	7	2.9e-08	2e-06	28.0	1.3	1	23	1504	1526	1504	1526	0.99

Sequence Information

Coding Sequence: ATGAAAAATCACTTGCAAAACGTTCTGTGTGCAATGCGTAGTGACTTCAAGGATAATCACCAGGAgaccataaataaaatgatacaATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCCGAGAAAGACATCGCAAGTGATCAGGAAGATAATGGCGCCTGCTCGCCGCTGACAACGGCGACACCGGCCAGCGCCAGTGCTGGGAATAGTCCCTGCCCCAGCCGCAGTCCGCGGCGccacagcgacgacgacgacgagttGGCTGGCGAACGGGAGCTACTACAAGTTGCAATTAAGGATCAGGAGGATAAACAGGATAAGCCGGATAAGCTGAAGGAGTGCGGGGAGAGTGTGGAGCAAATCGATAATCAAACGGATGCCAACATCGAGGatcacaatcacaacaacagtagcagcaacaaccacaacaacaacaacgatagcgataacgataacgatagcGATAACAAGAAAGTCAAGGTCATGACAAAACCGCCCGAGGAACACGAGACAAACGCGAACGCGAACTCAAACTCATCGTTGCCCAACTCACCCACCGCTGCCACATCCAGCATGGAGGAGCGACACAAGCAACTCGatgtcgatgtggatgtggatgttgaGATGCCGCAGGCGGAGCACGAAAAGAGTCCAGTTagcaatgcaacagcagcagcagcaaatgttgcagcgagtgcagcagctgcggccCAACAATTTGGGGCAACACCCGTCACTTTGGAGGCGATCCAAAATATGCAGATGGCCATCGCTCAGTTTGCGGCGAAGACTATTGCGAATGGCGCCTCCGGTGCCGACAATGAGGCGGCCATGAAGCAGCTGGCCTTCCTCCAGCAGACGCTCTTcaatctgcagcagcagcagctctttCAGATTCAGCTCATTCAGCAGCTGCAGTCGCAGCTGGCCCTCAACCAGGTCAAGCAGAGCAACGAGGACGACGCCGACGAGGATGCGGAGCCCGAGGAGCGGGAAGATGGCGAAACGGATACctacgaggaggaggagcgcaTTGCCGACATGGAGTTGCGACTGAAGGCCGAGGCTCGCATGGCCGAGTCCAAGGCACGCCAGCATCTCATCAATGCGGGAGTTCCGCTGCGTGAACGTTCCCGCTCCCATTCCCGTTCCGCCACGCCCTCGCCCAGCCCCTCGGCGGCAGCGTCGCCGGCTGTTTCCCTGAAACGCAAGCGGAGCGAAGATGCCGGCGCCAAgtctgctggtgctggtggggCTAAGGCCTTTGGCCAGCCGTTGGAGAGCGCCCAGGATGCGCTGTCCAAGCTGAAGGAGATGGAGAATATGCCGTTGCCCTTTGGCACCGATCTGGCATCCAGCATCATAACGAATCACGACGATCTGCCCGAGCCGAACTCCTTGGATCTGTTGCAGAAACGGGCACAGGAGGTGCTCGACTCGGCCTCGCAGGGCATCCTGGCCAACAACATGGCCGATGACTTTGCATTTGGGGACAAGTGCGGCGAGGGCAAGGGTCGCAATGAGCCCTTCTTCAAGCATCGCTGCCGGTACTGCGGCAAAGTCTTCGGCTCCGATTCGGCGCTCCAGATCCACATCCGATCTCACACGGGCGAGCGTCCCTTCAAGTGCAACGTCTGCGGCAGTCGCTTCACCACCAAGGGCAACCTGAAGGTGCACTTCCAGCGCCACGCCCAAAAGTTTCCGCACGTGCCGATGAATGCGACACCGATACCCGAACACATGGACAAGTTTCATCCGCCGCTGCTGGATCAAATGTCCCCAGACAGTTCGCCTACCCAATCGCCAGCGCCGGCAGCTGGTCAGGCGCCGACCAGCTCTACGTCCGCTCAGCCGTCAGCGATGTCGTTCCCGGGCCTGCAGGGCCTCTATCGTCCGCCCATGGAACTGCTGAAGTCCCTGGGAGCGGCGGCTGGCAGCACGGCCGGTCTGCCGCATCCCTTCTTCCCCCAGATGCCGGGCCTGGGTGCGGCTCTCAAacacagccaacaacagcagcagcagcagcatcaacagcagcagcaggttaGTCAGGATTTGCCTACTGATTTGCGCAAATCCTCTGGTCCCAGTTCACCCCACGACGAGGAAgaagatgacgatgatgacatGACTGCTGTACACTTGCCCGTCAAAGCGGAACTGCTCGAGGAGGAGAAGACGGAGCCGGAGATGGCAGCGACTTCCGCCGAGTGCGCCGACATGgaaccagagccagagccgCTGCCACTAGAGGTGCGCATCAAGGAGGAGCGCGTCgatgaggagcaggaggaggagcagcagcagcgggagcagcaggagcagcaacacgAAACACCTGCCAATCGCCGAACACCAACAGCCTCGCCCACAAACCCAGTGTCTGCGACTCCGCCACTAATGCAGCGAcatcaacagcatcatcaacatcttcaccagcatcatcaacatcttcagcatcatcatcatcagcatcatcccTCCCATATGCCCGGCTATCCACCGGTGGTGCAACCGATCCAACCACCAGGAATTATGCACGCCCAGTGCTCGCCCGGCTCCCATTCGCATCTGGATCAGTTGCCGACGCCTGGACAATTGCCGCCAACGATGCCGCATCGCGAGGATTTCTTTGCCGAGCGATTCCCTCTCAACTTCACCACAAAGACACTCTCCCCCGAGCACCACTCGCCCATCCGCTCGCCAGCTGGACATGCTCACGCCCACATTCCGCGGTCGCCCTTCTTTAATCCGATCAAGCACGAGATGGCGGCgctgctgccacgcccccacagCAACGACAACTCGTGGGAGAACTTCATCGAGGTGTCGAACACCTCGGAGACGATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATCAGCGATCCCAACCAGTGCGTCGTCTGCGATCGCGTCCTCTCCTGCAAGAGTGCTCTACAGATGCACTACCGCACCCATACGGGGGAGCGACCCTTTAAGTGTCGCATCTGCGGACGCGCCTTCACCACCAAGGGCAACCTGAAGACGCACATGGCTGTGCACAAGATTCGTCCGCCGATGCGCAACTTCCATCAGTGTCCCGTCTGCCACAAAAAGTACTCGAATGCGCTGGTGCTCCAGCAGCACATCCGGCTGCACACCGGCGAGCCAACGGATCTGACCCCCGAGCAGATTCAGGCTGCCGAGATTCGTGATCCGCCGCCCTCAATGATGCCAGGTCACTTCATGAATCCCTTTGCAGCGGCTGCTTTCCATTTTGGCGCCATGCCGGGCGGTGGTCCGGGCAGTCATCAACCGGGTGCAGGAGCTGCTGGCATGTCGGGTGCTCCGCACAATGGCGCCTTGGGATCGGAGTCCTCGCAGGGTGATCTGGACGATAATATGGACTGCGGCGATGGCGATGATTTCGATGATGCCTCCTCGGACCATCTCTCCAACGATCCGACGATGGGCGACGAACGCCCGCGCTCCGGCGACGACTTCAAGTCGCTGCTGTTCGAGCAGAAGCTGCGCATCGATGCCACCGGTGTGgtcaacatcaacaatcaTCATCCCCACTCGCATCAGTCGTCCCATCATCAGCATTCGCGTCCTCGCTCCGCGGCCAGCAATCCCAATTCGATTGGCTCCGCTTCCGCATCGCCCTCCGCCCCCGGCAGTCCCAGTTCGCAGCCCAAGGCGAGCTGTTCGCCGGTTCGATCCGTCTCGGAGGCATCGCAGGGCGCACTCGACTTGACGCCACGCGCCGTTGCCCCCGCCCCCTCGCAACCAATCGCCTCCGCCTCGCGATCCCCGCCTCCGCCCAAGGAGAAGACAGTGAGTCCGCTCAGCCAGCAGTCGACCCCGGCACGCAGTccctccgcctccgcctgtGCCTCCGTCTCCGCATCAGTTTCTGCCTCGCAGCTGCTCTCCTCGCAACTGGCACCATCTGTGGGCATTGATTGCCTGCCGCCCGGTTTGCAGcatcatctgcagcagcagcatcagcatctcATGCAGCAACAggcggcggtggcagcagcagcggctgcccAACATCATCACCATCAGATGCAGCAACATGCCGCCGCCCTGCATCAGCATCAGGAGCAACTGCGTCGCGAGGCACAGGAGGTGCAACAGaaagcggcagctgctgctgcagctgcggcgGCTGCCCAGCGTCAGACATCGCCACAGCCGCCAACACGTGCCGGCGAATCACCTGGCGGTCCACCCGGTGGTCAGCCCAATCCGTTGATCGGCGCCCGACCACCCTTCGGCATGTTCCCCAATCTACCCATCTTCCCGCCGGCCACCACACAGAATATGTGCAATGCCATGAATCAGATTGCCCAATCCGTGATGCCAGCGGCTCCATTCAACCCACTGGCATTGAGTGGGGTGCGGGGCAGCACCACCTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATCCACTACAGGAGTCACACCAAGGAGCGCCCCTTCAAGTGCAACATCTGCGATCGCGGCTTCACAACTAAGgGCAACCTCAAGCAGCACATGCTGACACACAAGATCCGCGACATGGAGCAGGAGACCTTCAGGAACCGAGCTGTAAAGTATATGAACGAATGGAGCGATGAACGCGAATAA
Protein Sequence: MKNHLQNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATPASASAGNSPCPSRSPRRHSDDDDELAGERELLQVAIKDQEDKQDKPDKLKECGESVEQIDNQTDANIEDHNHNNSSSNNHNNNNDSDNDNDSDNKKVKVMTKPPEEHETNANANSNSSLPNSPTAATSSMEERHKQLDVDVDVDVEMPQAEHEKSPVSNATAAAANVAASAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGASGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKQSNEDDADEDAEPEEREDGETDTYEEEERIADMELRLKAEARMAESKARQHLINAGVPLRERSRSHSRSATPSPSPSAAASPAVSLKRKRSEDAGAKSAGAGGAKAFGQPLESAQDALSKLKEMENMPLPFGTDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKCGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPAAGQAPTSSTSAQPSAMSFPGLQGLYRPPMELLKSLGAAAGSTAGLPHPFFPQMPGLGAALKHSQQQQQQQHQQQQQVSQDLPTDLRKSSGPSSPHDEEEDDDDDMTAVHLPVKAELLEEEKTEPEMAATSAECADMEPEPEPLPLEVRIKEERVDEEQEEEQQQREQQEQQHETPANRRTPTASPTNPVSATPPLMQRHQQHHQHLHQHHQHLQHHHHQHHPSHMPGYPPVVQPIQPPGIMHAQCSPGSHSHLDQLPTPGQLPPTMPHREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGSHQPGAGAAGMSGAPHNGALGSESSQGDLDDNMDCGDGDDFDDASSDHLSNDPTMGDERPRSGDDFKSLLFEQKLRIDATGVVNINNHHPHSHQSSHHQHSRPRSAASNPNSIGSASASPSAPGSPSSQPKASCSPVRSVSEASQGALDLTPRAVAPAPSQPIASASRSPPPPKEKTVSPLSQQSTPARSPSASACASVSASVSASQLLSSQLAPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAAQRQTSPQPPTRAGESPGGPPGGQPNPLIGARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDERE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499142;
90% Identity: iTF_00528350;
80% Identity: -