Basic Information

Insect: Drosophila kambysellisi
Gene Symbol: -
Assembly: GCA_035042185.1
Location: JAWNLS010000938.1:137303-140044[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.98 68 4.3 0.5 1 23 216 239 216 239 0.95

2 9 0.072 5 7.8 0.1 3 23 294 315 293 315 0.94

3 9 0.0028 0.2 12.2 4.2 1 23 556 578 556 578 0.97

4 9 0.01 0.72 10.5 1.1 1 23 584 606 584 606 0.97

5 9 0.00056 0.039 14.5 0.8 1 23 612 634 612 634 0.98

6 9 3.4e-07 2.4e-05 24.6 0.1 1 23 640 662 640 662 0.99

7 9 1.4e-06 0.0001 22.6 0.4 1 23 668 690 668 690 0.99

8 9 8.5e-07 6e-05 23.3 1.2 2 23 697 718 696 718 0.97

9 9 0.00011 0.008 16.6 0.7 1 23 724 747 724 747 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.98	68	4.3	0.5	1	23	216	239	216	239	0.95
2	9	0.072	5	7.8	0.1	3	23	294	315	293	315	0.94
3	9	0.0028	0.2	12.2	4.2	1	23	556	578	556	578	0.97
4	9	0.01	0.72	10.5	1.1	1	23	584	606	584	606	0.97
5	9	0.00056	0.039	14.5	0.8	1	23	612	634	612	634	0.98
6	9	3.4e-07	2.4e-05	24.6	0.1	1	23	640	662	640	662	0.99
7	9	1.4e-06	0.0001	22.6	0.4	1	23	668	690	668	690	0.99
8	9	8.5e-07	6e-05	23.3	1.2	2	23	697	718	696	718	0.97
9	9	0.00011	0.008	16.6	0.7	1	23	724	747	724	747	0.96

Sequence Information

Coding Sequence: ATGCTAAAAATGACAAATGTGCCGTTGCCgaaaatgcttaaattcagcagcagcagcagcagcggcaaaaacagcgcagcagcagcgaaaaagACTCGGCATAATGGATTAGCAGCCGTCGCAGCTGCGTCGCTGCGCTGCGCAGTCGACGACACGGACGAATCCGATGAGGATTCTGAATCAGAACTAGATATCGAAGAGGTTCACGATcccgatgacgatgacgatgatgatgatgatgatgatgacgatgaggtTGTGCTACAGATCGACAGCGAGGACGAAGCTGAGCTGGAGGCGCAACGTATACGCTTAGATGATataaaagcagcagcggctgctgctgccgccgcagcAGAGACGCAGGTCAGTAACGGTAAAGTGACGACGGCGTCGCGCAAGCCGCGTGGGCGTCCGCCGggcagcacaaacaaaaacaacaatacaaacaaaaacaacaacacaaacaacaacaacaacaagaatcagaaccagaaccagcgaaacaaaaacaaacgcaaataCTCAAAGAGCAGCTGCGCAagcgtcgctgccgctgcttctcCAGCTCCCCTTTCCGCCCCCGCTCCCTCatcgattgttgttgccaaaataCATGCGGATGAGAAAACACATCGTCTGATTTACAGTTGCGTTGAGTGCTCCCTGCTCTATGGCGATGCTCAAGCGCTCGCCCATCATTGGCACAAGGAGCACCAGTCACGGTTGAGGCAAACGTCAGTTAAACTGGAGCCGCCAATAGAGCTGAGCGAGGGCCTCAAACTAAGCGACTTGAAATGCTGTGCGCAACTTTTGTTGCTGAGGCGCAGTGCGGATGAGGATAAGGATCAGGGAGAgagggagcagcagcagctgctgtgctCCACTTGCGATGCACAATTTGAGCAAGGCGAGGAGTTGCAGGCGCATCTTAGCGAGCAGCATGGCATCTTCAAGCTGTTGGTGCCCAAGCGGGAGCCCAGCGAACCCATGGTCAGCATACCATGTGATGTGGCCAGCAGTAAGTTAATGCCAGTGCCGGCTTCGGAGCTGCCAGAGACGCCGCCGCCGGAGAAGGAGACTGCGGATAAAGATGATCTCGCAATGATTAGTGCTATGGTGGCGGAAATAACAGCCGAACGTAGTCCCAAGGTCAATAAGATGGTTATCAAGCTGCCAGTGGGTAAGCGTGGAGGACGCAAGCGCAAGAAGAAGGAGCAGAAACCAAAGCAAGAGCAGGTGCAGGAGCTGGTGCAGTCAAAGCAAGAGCAACAGGCGAGTCAAAATGCCAAACGCAAGCGAACACGCAAAGCACAAAAGCCAGTCGAAGAGGAGGAAAAGGAGGAGAAGCAACAGGAGGAGCAGAAAAAGGAGCTGCAGGAGAAGATCGATAAACCGGAGGAGAAGCAGGAAATCAAGGAGGAAACAGAGCAGAGACGCATGCGCAAAGCACGCAACTTTGTGGACTACGTGGTCGATGTGAAAgatgaggatgatgacgatgacgacgacgatgaagATAAGGACACGGAGGCCGAGTGCACAACGCCACACAATAGCTCCACAGATGACAGCATTGCGGATCCACAGATCAAGCGTGAATCCTCCGAGGAATCGCAGCGCAATGCCAATGGCAACgccaacagccgcagcagcagcggccagCACACGTGCAACTTTTGCAGCAAACCCTTTCAGCGTTTCTCCCGGTTGCAGGATCATCTGCGTTTGCACACTGGCGAGAAGCCGCATGTATGTGGCCAGTGCGGACGAGCGTTCCGCCTGAAGATGCGCATGGTGGAGCACCAAATGCGCCATCGCACCGAGAAGGCATTCAAGTGCGAGCTGTGCGGTCTGCCGCTGGCCACCAAACAGGACATGACGCTGCACATGCGGCACCACAAGAACGATCGCCGCTACAAGTGCGATCGGTGTGGCAAGGGATTTGTGCGCAGCTCCGATTTGGCCATACACGTGCGCGTCCATACCGGCGAGAAGCCGTACAGCTGTGACCTGTGCGGCAAGGCGTTCCGTGCCCGCCAGAATCTCATCGTGCATCGGCGCACGCATCTCGGCGACAAGCCCATTCAGTGCGAGATGTGCGACAAGCGTTTCTCCCGCAAAATCGATATGCGTGTCCACATGCGCCGGCACACGGgtgaGAAGCCGTTTATCTGCACTGCCTGTCAGCGTGGCTACTCCTCCCGAGTCAACTTGCAACGGCATCAGCAGCGGGAACATGGCGGCGATTTAACCGTAGTGCCGCAAACGGAGAAGCCGGCTCCAGCGAAGCCTGCAACACGTCGTCCGCGTCGCGAGAAGCTGCAGGAGAAGATTGCTGCGCAGGAGAAGCTGCTGAATGAGCTGAAGCGTAGCCTCAGCACGCTCACCGACATCGCCGAGGAGGCAACGCCGGCAGCTGTCGAGGAGGAGAAGCACAACATAACGGAACTGGCCGCGGCGGATGCAGGCGCTGGCACTGTGGCGCAGGTATCGGTTACCGTCTCGATGCACGTGGAGCCGGCGAAGGGGGACGACGATGAGGAGATCACTCCGGAGAAGGAGAATGCGCTTTCGAGCGGCTCGGCAGCGGATGCCGCGTCCGGCAATGGCAAGACGAAGGCAAATCGCAAGATAACCAGCTACTTCACCGTTGTTGGGCAGCAGGCAGAAATCTAA
Protein Sequence: MLKMTNVPLPKMLKFSSSSSSGKNSAAAAKKTRHNGLAAVAAASLRCAVDDTDESDEDSESELDIEEVHDPDDDDDDDDDDDDDEVVLQIDSEDEAELEAQRIRLDDIKAAAAAAAAAAETQVSNGKVTTASRKPRGRPPGSTNKNNNTNKNNNTNNNNNKNQNQNQRNKNKRKYSKSSCASVAAAASPAPLSAPAPSSIVVAKIHADEKTHRLIYSCVECSLLYGDAQALAHHWHKEHQSRLRQTSVKLEPPIELSEGLKLSDLKCCAQLLLLRRSADEDKDQGEREQQQLLCSTCDAQFEQGEELQAHLSEQHGIFKLLVPKREPSEPMVSIPCDVASSKLMPVPASELPETPPPEKETADKDDLAMISAMVAEITAERSPKVNKMVIKLPVGKRGGRKRKKKEQKPKQEQVQELVQSKQEQQASQNAKRKRTRKAQKPVEEEEKEEKQQEEQKKELQEKIDKPEEKQEIKEETEQRRMRKARNFVDYVVDVKDEDDDDDDDDEDKDTEAECTTPHNSSTDDSIADPQIKRESSEESQRNANGNANSRSSSGQHTCNFCSKPFQRFSRLQDHLRLHTGEKPHVCGQCGRAFRLKMRMVEHQMRHRTEKAFKCELCGLPLATKQDMTLHMRHHKNDRRYKCDRCGKGFVRSSDLAIHVRVHTGEKPYSCDLCGKAFRARQNLIVHRRTHLGDKPIQCEMCDKRFSRKIDMRVHMRRHTGEKPFICTACQRGYSSRVNLQRHQQREHGGDLTVVPQTEKPAPAKPATRRPRREKLQEKIAAQEKLLNELKRSLSTLTDIAEEATPAAVEEEKHNITELAAADAGAGTVAQVSVTVSMHVEPAKGDDDEEITPEKENALSSGSAADAASGNGKTKANRKITSYFTVVGQQAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00517159;
90% Identity: iTF_00498326;
80% Identity: -