Basic Information

Gene Symbol
onecut
Assembly
GCA_035042185.1
Location
JAWNLS010000467.1:302402-307881[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-37 1.4e-33 114.7 0.3 3 78 720 795 718 796 0.97

Sequence Information

Coding Sequence
ATGGAATCGATGAACGAGATTATTGATGCACAAACCTTCGGCCAGCAGCTGGTTGTGGAAACGAGTGATTTCATAGGGCAACCCGGCAGCCCTGAAAGCGAATCCGAATGCGAACCGAGTGAATTGCACGAGACgggcattaaatatttgaaagccTCTGCGATGCAAACTCTAATTGGGAACACAAATCGTAGTCGCAGCAATCGATTAATCGAAGATGATGAAGAGCAGGAcgagctggaggaggaggaggaggaggatcagGAGCTGGAAGAGGAGGAGCATGAGTTGGAGGAGCAGCAAGAGTCACGATCTGTGGTGATGGTCATCGATGAATTGGGTCACAGCAATTATCAACTGATGCAACAACAGGCAGGTAGTAGAACAATACCAACAATGTCCTCGCTGCTACCCTCCATGCATCAGCGCAACAGTCCCGTCGATTTTGTGGGCTCCGAACTCAGTTTGGATGGCTTAACCAATACTCAGATCATAGCCGTCAAACAGGAGCACAAATTGGTCATTGTGGAGCGAGGAAATAATCGCAGAGGCTTATCGAATTTGAATGTGATCGATGAGTTGTCCGAGGATGCAGGGGGAATCGcccgaggaggaggagtgaGAGTTGAGGAGGTTACTCTGaatcagcatcatcaacagcTGCTACAGGAACAatcacaacatcaacatcatcatcatcatcatcatcagcagcagcagcaggcgcagcatcaacagcaataTGGAACGGAATTActtaatcatcatcataatcaaaGCCAGGCTCATCACAATCCTACCACTACCGCTACAAACTCGCGTCGCTTGCACCTGCTCAATCAGCGCGAAGAACTATCGGTTATTGTCCCCACGCTCCCCGATGATGaggataacgataacgatatcgatgacgatgacgacgaagATGAGCGCGATGCCGGCGCACATTTGCTTAGTCCCACTGAGCAGAGCACCTATCAAACGCTTACAGccgtcaacaacaataacaacaacaacagcagtacaCACAGCACtaccagcaacaccaacaacaataacaatcgcATATCAGAACCGATTTATAGCCCCACATCGTATGCGACCTTAACGCCAATCCAACCTTTACCGCCCATCTCAACAATGTCCGATAAATTTGCGTATACGGGTCACATTTCCAACTCCAGCTCAAATATAGCCGGTAGTGttaatagcagcagcagcactgtAGTAGCAGCGACGGGTCGTCTCAATAATTCAACGGATGTTGCTAGCAATGATTGTGGTACCTTTGCCAATTTACCGCTACCCATTGAAACgggacatcatcatcatcatcagcatcatcatcaacagcatcagcatcagcatcatcaacatcatcacgGTTTGAGTTTGGGCGGACTGCCTTATGCCAGCTATGATAAGCTCCCTTCACTCATCTCAACGCCACCGCATAATTATGCCAGCAGTACCTCGCCCACACATGGAATGTCTGGCTTGGTTGTAGGTGCTTGTGATTTACATGGACACAATTCAACGGTGGTCTCTTCATCATCACCGGTTGCTGGTACGGCAATATCACCGCAGAAACAAGTGCTTTGCCTCTCGCCTGGTAGTGGTCTACCCGATGGCGTTGTTGTCAGCGACTATGAATCCTCTTATGGCCCGCCTCAACATGAACACGAGCTAATTAATGCGACAGGCGGTCGCAGCAGTTCCCAGTTGCGTTTGCAACACAGCCCTACACTGAGTCCACATTCAGCAGGCTCGGTAGTGTCAATGTCCCTGCATTCACCGGCCTCTGTCGTCACATTGCCGCACATAAATGGTTCGGTGACCAATTTAGCTGTGGATCTACCAGTTGTGGTCTCCTTAACGCCGacacctcctcctccacctccccTACCGTCCGGAGAGTGTGCCAGCAGCTCGTTGGCTGTCAGCTTGGATGAGATGTgtcagcgacaacaacatcagtcAAATGATTGCCTGCCCACAAATAGTAATCCCAATCTCTGCAATTTAAATCAGTCCCAGCATCATCAACAAAATGGCTTTAACCAGGAGCAACACTCTCAGCAACTCAAGCTGTCCCCCAAGTCAGCAGTACCGCCTCTAAACTCAACTAGTTCCGCTTCGAATCGTTCCTCTGACCTCGAGGAGATAAATACCAAGGAACTGGCTCAACGCATATCGGCGGAACTGAAGCGTTATAGCATTCCACAGGCCATCTTCGCACAGCGAGTACTCTGTCGGTCGCAGGGCACGCTCTCGGATCTGTTACGCAACCCTAAGCCCTGGTCGAAACTTAAGTCCGGCCGTGAAACGTTCCGGCGCATGTTCAAATGGCTCCAGGAACCCGAATTTCAACGCATGTCAGCGTTGCGCATGGCTGCCGCTCAGATTCCACAACGGCCAGCGAATGGCATCAGTGTCGGTGTCGGTAGTGCTGCTGGCGGTGCTATGACCAGTGTTGGTTATGCAACGGCTGCTGCGACAGGTGCGACGGCCACTGCTGCGATAGTGCTGAGCAACAGCTCAACAAATGCGGATGGTGCTCACGTCTCGAGTCTTGCTGATAATGACATGCTGAGTGCATCTGGTGGCTCTGTTGTTGGAGTTGTCGCCGCCTCCAATTGTCGTCGCAAGGAGGAGCCGCAAATGGAACAAATGCCGCAGCCGAAAAAGCCACGATTAGTCTTCACCGATCTGCAGCGAAGGACATTACAGGCTATTTTTAAGGAGACAAAGCGACCCTCGAAGGAGATGCAGGTGACAATTGCCCGCCAGTTGGGCCTCGAGCCTACCACAGTGGGTAACTTCTTTATGAATGCACGTCGACGATCGATGGACAAATGGCGTGATGATGACACCAAAAATACCCAGCATCATGCACACAATCGCCAGGAGCACCCACTGGACGAACAGGATGAGAgggaaagagatagagatagagagagcaaTAGTGGCCAACATGGACAGCATTATGTAAGCAGTTTGCATACGACGGCAATGTCCCCATTGGGGAattttgatgatgatggcgataTGGATTTGGAACTGGAGCATCATGATTTCCTTGTGGATGGCGATGAGCATGATGATATGTTGTGA
Protein Sequence
MESMNEIIDAQTFGQQLVVETSDFIGQPGSPESESECEPSELHETGIKYLKASAMQTLIGNTNRSRSNRLIEDDEEQDELEEEEEEDQELEEEEHELEEQQESRSVVMVIDELGHSNYQLMQQQAGSRTIPTMSSLLPSMHQRNSPVDFVGSELSLDGLTNTQIIAVKQEHKLVIVERGNNRRGLSNLNVIDELSEDAGGIARGGGVRVEEVTLNQHHQQLLQEQSQHQHHHHHHHQQQQQAQHQQQYGTELLNHHHNQSQAHHNPTTTATNSRRLHLLNQREELSVIVPTLPDDEDNDNDIDDDDDEDERDAGAHLLSPTEQSTYQTLTAVNNNNNNNSSTHSTTSNTNNNNNRISEPIYSPTSYATLTPIQPLPPISTMSDKFAYTGHISNSSSNIAGSVNSSSSTVVAATGRLNNSTDVASNDCGTFANLPLPIETGHHHHHQHHHQQHQHQHHQHHHGLSLGGLPYASYDKLPSLISTPPHNYASSTSPTHGMSGLVVGACDLHGHNSTVVSSSSPVAGTAISPQKQVLCLSPGSGLPDGVVVSDYESSYGPPQHEHELINATGGRSSSQLRLQHSPTLSPHSAGSVVSMSLHSPASVVTLPHINGSVTNLAVDLPVVVSLTPTPPPPPPLPSGECASSSLAVSLDEMCQRQQHQSNDCLPTNSNPNLCNLNQSQHHQQNGFNQEQHSQQLKLSPKSAVPPLNSTSSASNRSSDLEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQIPQRPANGISVGVGSAAGGAMTSVGYATAAATGATATAAIVLSNSSTNADGAHVSSLADNDMLSASGGSVVGVVAASNCRRKEEPQMEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDTKNTQHHAHNRQEHPLDEQDERERDRDRESNSGQHGQHYVSSLHTTAMSPLGNFDDDGDMDLELEHHDFLVDGDEHDDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00501592;
90% Identity
iTF_00609782;
80% Identity
iTF_00525030;