Basic Information

Insect: Drosophila jambulina
Gene Symbol: -
Assembly: GCA_018152175.1
Location: JAECXH010000006.1:1814292-1820321[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.28 20 5.8 0.1 2 23 333 355 332 355 0.89

2 6 0.00056 0.041 14.3 0.9 1 23 366 389 366 389 0.92

3 6 0.00025 0.018 15.4 2.7 1 23 399 421 399 421 0.97

4 6 2.8e-06 0.00021 21.5 2.1 1 23 724 746 724 746 0.97

5 6 3.5e-06 0.00026 21.2 0.2 1 23 752 774 752 774 0.98

6 6 1.6e-05 0.0012 19.1 4.2 1 23 780 802 780 802 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.28	20	5.8	0.1	2	23	333	355	332	355	0.89
2	6	0.00056	0.041	14.3	0.9	1	23	366	389	366	389	0.92
3	6	0.00025	0.018	15.4	2.7	1	23	399	421	399	421	0.97
4	6	2.8e-06	0.00021	21.5	2.1	1	23	724	746	724	746	0.97
5	6	3.5e-06	0.00026	21.2	0.2	1	23	752	774	752	774	0.98
6	6	1.6e-05	0.0012	19.1	4.2	1	23	780	802	780	802	0.98

Sequence Information

Coding Sequence: ATGCTGCTCCGGAACTTCAGCTCCCCGATGAGCGCCATGGCCGCCAGTCGCTGCCCCACCCCCTTCGCCTTTCCCTTCACGCCCCTGGGCCTGAGCCTCTTCGACATCGATCCGTCCAGAATCCTAAGCCTGCTGCACCATCAGACCTGGCTGGCAGAGGAGGCACTCAGGACACGTGGTCTGCTGGCGGCGCCCAAGGACTTTCCCCATCGCTTCACCACGCTGAGCGACCTGCTGACCAAGGACTACCAGCCAGGAGCGCCGACGGCCACCGCCACGGCAACGGCTACCACCGCCTCCTCCTCGTCATCCTCCTCCCTATCCTCCTCCTCAGCCGCGGCCGCCGCCTCAAAGGACACGCCGGCACAGTACAAACAGCAGCAGCAGGGAGCGGCCGCCACCTTCAACCTGCGCTACCCCACGCCCACGGCCTTCTACCAGCAACAGCAGCAGGCCAAGGTGGCCAAGTCCTCGCCATCGCCCCAACAGATGGCCACCAGCACCAGCACGGCCATGTCCAATGACTCCGGCGAGGACAGCTGCAAGCGCAGCTCCGCCGACAGCGACGAGGTGACCATCGTGGAGCTGCCCAGTGAGCGCAGTGCCCAACTCTACAAGGAATCGCTGGAGCAGCTCCTGCAGCGCCAGCGACGCACACCCATCCTGGGCGGAGGCGTTGCCACCGGCCTGGGCAGCGGCGGCGTCATCGTGGACGCCACCGGACTGAGGCAGTACACCCAGCTGCTGCTGGCCAGCGCCGGCAATCCGGATGCCTGCAAGGAGAAGAGCTCCTCCTCGTCCACCTCGTCCACACCACCGCTGCTCAGCCAGCAGCAGCTGAGCCAGATGTTGAAGAGTCCCTCGGACACCTGCTCCTCGCTGTTCAGCTCTACAGGCGGTGGCGGTGGAGCCGGTTCCGGCTCGAACTCTGGCATCATGGCACCCGGCACCGGCACCGGCCCTGGCGCCACCATGGAGACGATCGAGGAGGAGACTCGTTGCGTGGTCTGTAATGCCCACTTCCCCAATGTCTGGCTGCTGGAGCAGCACGCCGCCCTGCAGCATCCGCACGTGGGTCCCGGCGAGGAGAAGCCCTTCATTTGCGAGCAGTGCGGCCAGTCCTATCGCTACCGCAGCGCCTATGCCAAGCACAAGGAGCAGAATCATCGGGCCCGCCTTCCAGCGGACAAGCTCTTCACCTGCGACGTCTGCGGGATGCAGTTCCGCTACCTGAAGAGCTTCAAGAAGCATCGCCTCAACCATGCCCTGGAGCGGCTGCACGGCAAGAAGAGTGTGGGCGTGGGCGTTGGTGTCGGTGTGGGAGTTGGAGTGGGACGCCTCGGGTCCTCCTCCGCCTCCTCCTCCATTTCCATGCCAGTGGCCACGCCCACCTCAGTCTCTGCCGCCGGTTCGGTGACATCGGTGGACCAGGATGTGGTCACCAGCTCCCAGGAACCGATGCTGGCCGACGAGGGCGAGGATTTGCGGGTCAATGTCAAGCGGGAGGAGCAGCCGGAACACCACTCAGGTGGGGGCGGGGCGGATGGCGAGGAGCACGAGCAGGACAACACCGTGGACTCGGCGGGCATTACGATGCTCTACCAGGACAACAACTCATCGGCCTCGGCCTCCACAAGCGCCACCGAGCCGAACATAAGCAGCTCCGACGGCATTCATAGTACAAACAAGAGGTCGCGCATGCACCACTTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCTGGGCCACGTCTCACTGCCACTGGTGGCCACCTCGGCCGCTGGCTCCTCGTCCTCGGCGGCTGCTGCTGCCGCTGCCGCTGCCACCGCCGGAAGTTCTGGCGTGGCAGGAAGTTCCTCGGCAACCGGAAGTGGCGGAGGCGGCGGCTCCAGCTCGGGTGGCAACGGAGGAAGCGGAGGAATTAGCTCCCTCAGCTCGCTGACCTCGCTGATCAACGTCGAGCGGATACCGAATGAGCAGTTTCTGGGTCTCAATCCGCAGGAGGCCTCCATACTCAACTTCTTGCGCGTGGATGCCGCCGAGCGTCAGAGGGATAAGAGGCCTGCCACCTCGCGCTTCGCCTGCCCCTTCTGTGGCAAGTGTGTGCGCTCCAAGGAGAACCTCAAGCTGCACGTGCGCAAGCATACCGGCGAGCGGCCCTTCGTGTGCCTCTTCTGCGGCCGGGCCTTTGGCGGTAAGTCGGATCTCACCCGCCATTTGAGGATCCACACCGGGGAGAGGCCCTATCACTGCGAGTCCTGCGGCAAGTGCTTCGCCCGGGCGGACTACCTGTCCAAGCACCTCACCACCCACATCCATAACGCGCCGCGCTGA
Protein Sequence: MLLRNFSSPMSAMAASRCPTPFAFPFTPLGLSLFDIDPSRILSLLHHQTWLAEEALRTRGLLAAPKDFPHRFTTLSDLLTKDYQPGAPTATATATATTASSSSSSSLSSSSAAAAASKDTPAQYKQQQQGAAATFNLRYPTPTAFYQQQQQAKVAKSSPSPQQMATSTSTAMSNDSGEDSCKRSSADSDEVTIVELPSERSAQLYKESLEQLLQRQRRTPILGGGVATGLGSGGVIVDATGLRQYTQLLLASAGNPDACKEKSSSSSTSSTPPLLSQQQLSQMLKSPSDTCSSLFSSTGGGGGAGSGSNSGIMAPGTGTGPGATMETIEEETRCVVCNAHFPNVWLLEQHAALQHPHVGPGEEKPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDVCGMQFRYLKSFKKHRLNHALERLHGKKSVGVGVGVGVGVGVGRLGSSSASSSISMPVATPTSVSAAGSVTSVDQDVVTSSQEPMLADEGEDLRVNVKREEQPEHHSGGGGADGEEHEQDNTVDSAGITMLYQDNNSSASASTSATEPNISSSDGIHSTNKRSRMHHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGHVSLPLVATSAAGSSSSAAAAAAAAATAGSSGVAGSSSATGSGGGGGSSSGGNGGSGGISSLSSLTSLINVERIPNEQFLGLNPQEASILNFLRVDAAERQRDKRPATSRFACPFCGKCVRSKENLKLHVRKHTGERPFVCLFCGRAFGGKSDLTRHLRIHTGERPYHCESCGKCFARADYLSKHLTTHIHNAPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489658;
90% Identity: iTF_00492538;
80% Identity: -