Djam015049.1
Basic Information
- Insect
- Drosophila jambulina
- Gene Symbol
- hang
- Assembly
- GCA_018152175.1
- Location
- JAECXH010000006.1:7730108-7737388[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.18 13 6.4 1.0 3 23 236 257 235 257 0.93 2 15 0.57 41 4.8 3.1 3 22 365 384 363 384 0.89 3 15 0.00038 0.028 14.8 3.3 1 22 504 525 504 527 0.90 4 15 0.044 3.2 8.3 0.1 2 21 539 558 538 559 0.93 5 15 0.00044 0.032 14.6 0.2 2 23 692 714 691 714 0.95 6 15 0.0013 0.092 13.1 0.1 1 23 722 745 722 745 0.96 7 15 1e-05 0.00075 19.7 0.1 2 23 832 853 831 853 0.97 8 15 0.00018 0.013 15.8 2.9 2 23 937 959 936 959 0.97 9 15 0.014 1 9.8 0.2 2 23 968 990 967 990 0.95 10 15 0.00031 0.022 15.1 0.2 1 23 1003 1026 1003 1026 0.97 11 15 7.9e-05 0.0057 16.9 1.1 1 23 1091 1113 1091 1113 0.99 12 15 0.0012 0.089 13.2 0.9 1 23 1121 1144 1121 1144 0.96 13 15 0.48 35 5.0 0.3 2 19 1152 1169 1152 1170 0.93 14 15 2e-05 0.0015 18.8 1.4 3 23 1260 1280 1259 1280 0.98 15 15 0.0032 0.23 11.9 0.1 1 23 1315 1337 1315 1337 0.97
Sequence Information
- Coding Sequence
- ATGTCGGAGTACATAAGCTCCATCACCTCACAGGATCGACTGTCGCTGCATATATGCCACGCCTGCATCAGCTACCTGAACTCGTGGCAGAGCTTCAAGAACCGCTGCCTCAGCTCACAGACAAAGCAGCGCCAGTGGCTGGATACCAGCAACAAGAGCAAGCTCTTAAACTACCTGGACCTGAACAGTGCCGAAAACGGTGGTGGAATGGAGAGCTTGTCGTTGTCGCTGCCACTTGATTTCAGCCAAAGCTGCAGCAGCGGTCACGTCCAACAGTCGGGTCTGCTGCCCCTGGCCACGGCCACGGCCACAGCCACGGCTACGGCAACGTCCACAGCGACGTCCACGTCCAATCCTACGGGCATCGCGTCAGCCACTGCCACTTCTGGCTCTGGCTCTGCACCTGCATCAGCATCCGTGTCCACGGCTCCGCTGCTCATGCCGCCGGTGCCAGCGTTGCCCATCAAAGATGAGCCCATTGACACGGACGATGACTACCAGATGAAGATGATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATATGCCGTTAATGGGCTCGGACTATGACTACACGGCCCAGCATGGCGTTAATGCCCATTCTCTGGCTGCCGGACTGCCACCGAATGCGGTGGCCAATGTGGCCGCCGCCGGGGATTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCCTGCAGTTCTCCACCCGAGCCAATGCCCGTCGGCATGAACGCAATCTGCATCCGAACCTCTTCCAGCTCTCCACGGACTCTCTGCACAACACGTCAGTGACGAAGCCAACGCCAGCTCTGGCCGCAGCATTGGAAATCCAGCGGGCGGCAGCGGCAGCGGCCACCGCAGAGGCGAACCGTGCTGTGGGCGCTGCTGGCGGAAATATCACTCCCCAGAAATACCGTCAGGTGGTGATGAACGCGTTCATCAAGTGCGAGGGCGGCGGCTATGACTATGACAATCCGGAGCAGTACCGTCCACTGCTCACCCACGACAAGGTGGAGTTCATCGAACAGAACGAGGAGTTCCTCGAGCAGTACCAGACGATGACCTGCCGCTGCTGCAGCAAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCTCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTCAAGAAGCGCAACTGCATAAATCTCTACAGGGTTTTGAATACGCTGCGCGGCAAGACACCAGTGCTTCCCATCTCCGCCACGGACGCTGACGCGGATGCGGATGCAGCGGCGGTGGCTGATGATGGAGCCACAGCTGTAGCAGTGGCAGATGCCGGTGCAGGCGTTGTCACGATGGCCAGTCCCACTGTGACCATTAGCGGAGAGACCACCGGCACTCCCAGCGGCGGTGAACGCCCAGAGAAGCTGCGCGCCAAGGAACTGCTGGTGAACAAGCTATACGAATGCAAGCTCTGCCCCAAGGGTTTCCGCACCAAGCATGAGTTCCGCACCCATGTCTACGACAAGCATGCTGATGTGCAGCGCAAGGACAATAACTCGATACAGTGCAGCTTCTGCGGCTTGGACTTTGCCGATCCGGTGGACAGGCGTCGCCACTACAACAACATGGACTGCATTGTGCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCACCAGCGCTTCCTCGATCACGTCTACCAGGATCATCTGGGCGGCGTGGGTGGTGGCGGCGGTGCCAGCAGTGATAATGCCTCCACGACAGGCAGCGGCCTGGCAAGGAGCAACAGTATGGAGCATTCGCCGGGCAAGAGGAGTTTGCTCGGTGCCCTGGGCATTGGCGTTGGCTCATCGGCGGAAGAGTCGCGCAGCAGCAGTGTGGCTCCCACACTGACATCCACGCCCAAGCCAGCGGGAGGCGCGGCCACAACGGCGTCCTCTGCCTCCGCGCCCAGTTCGACGAATCGTGCTGATGCGGCCGCACCCAAGTCCCAGTACTTTTCGCGAATGCCGCAGGTTTGTCCCATTTGCGGACAGCAGTACAATAACTACAACAACGTGCTGCGTCACATGGAATCGAAGCATCCAAACAAGCTGCCAGAGACATACAAGTGCGTGCGCTGCGGCCTGGGCTATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGGCACTCTGGCGGCTTCGAGTATATCGTGAACGCTGATGCCGTGAAGCTGGCGGACGGCAGCACGCCGAATGTGTACACGGGTCGCTACGACTACGTGATGAAGGACTTGATGTCGATAACAAATGGTGGGACCCTCGACGAAGACGAGGAGGAGGCGGCAGGCAGCGTGGCCAAGAAGATCCGGCTGGACGACAGCAGCAACAACAGCAGCTTGGCGGGCGTCGCCAGCCAGCAGCAGAAGGAGTGCCCCATCTGCAATGCAGTGTTCAGCAACAACATTGGCCTCTCCAATCACATGCGCTCCCATTACACAGCCGCCAGCGTGGTGACCGCAGCTCTGGCGGCCGCCAATCGCATGACACCCAAATCACTGACCATAACAGCAACTCCAGCGACAGCGGACGCAAGTCCAGAGGCGGCGGCATATACAGCATCTACCCCGGCAATAGCCAGCAGCAATGTTGTGCCGCCGGCAATGGCCAATCAAACGCCCCAGGAGCAGGCCGTATTTCGACGTAGTTTGGATCAGGCGGCCGACCGTCGCTTCCGGCGAATGCGATGCCGGATTTGCCAGCGGCGCTTCAGCTCAAAGAAGTCCTATCGCTACCACATGCTGACGGACCATCAGGTGCAGAATGTACAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTCGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCACGGTCGAGCGATCAAGGACGAGATGATCATCAAGCAGTTCGAGTGCGAGGTCTGCTCGATTGTATACAGCTCGGAGCAGGAGCTGCAGCAGCACAAGCGCAGTGTCCACAAGCTGACATCTGCCTCGGCCTCTGCTTCTGCTTCTGCCTCAGCATCGGCGTCCGCCTCCACTTCCTCGAAGATGGAGGACGATGTTTTGATGGACGATGAGGGCAAGCCAACAGCTGCAGGCGATCAAGCCGATCTGTCCACCCTTTCCGCCAACGCGTCGGGACTGGGAGTGGGTACGCCGCTGTACTGGTACCAGTGCAAGTACTGCCCCTCTAACTTCAACACCAACAAGAAGCTGGCCATCCACATTAACTCGCACGACGAGTTTGACTCGAATGATTACTCCTGCAAGGATTGTGGCAACGTCTACAGCGGACGCAAGAGTCTATGGGTGCACCGCTACAAGAAGCATCCACAGGTGCCAGATCCGGCCGAGTGCTCGCTGTGCCGCAAGATCTTCTTCGATCGCCAGATGCTGGACAACCACACGCCCACCTGCAACCGCAAGCCAATCACCTCGACGGGTGCCCACCAGCAGCAGGATTCGCTGCACCAACAGCAGGCGGCACTGCAACGCGCTGTTTTCCGGCACAAGACGGGTGACGACGACGAGGAGGATGATGATGGCCACCAACAGCAGCAGCTGGAGGAGGGCGATAGCAACGGAGGCGCAACCGCGTCGGCATCGGGAAGCGCCGCTGTGGCAGCGGCAGCTTCTGCCCAGGCTGCACTGAAGATCCGCATACCGGAGGTGGCCTGCACCATTTGCGGGGCCCGGTTCACCGATCAGGAGCACTTTAGCAAGCACATCCAGAAGCACGAACAGGAGCTGTACGTGGACAATCCGCTGGCGGCGATGTTCGACGATGGGCCGGCGGATGCCGGTCAGTTCCAGGTTGAGCGGCAGAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGGTGAGCGTTTTTCGGCTTGTGCAGCGAGGAGGACGAGCGACGATGGACGATGGGCGAGTAGTGTCGTCTGTCGCGCCACCCACTAACTAA
- Protein Sequence
- MSEYISSITSQDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTSNKSKLLNYLDLNSAENGGGMESLSLSLPLDFSQSCSSGHVQQSGLLPLATATATATATATSTATSTSNPTGIASATATSGSGSAPASASVSTAPLLMPPVPALPIKDEPIDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMGSDYDYTAQHGVNAHSLAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSLHNTSVTKPTPALAAALEIQRAAAAAATAEANRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLTHDKVEFIEQNEEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNTLRGKTPVLPISATDADADADAAAVADDGATAVAVADAGAGVVTMASPTVTISGETTGTPSGGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSVAPTLTSTPKPAGGAATTASSASAPSSTNRADAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDEEEAAGSVAKKIRLDDSSNNSSLAGVASQQQKECPICNAVFSNNIGLSNHMRSHYTAASVVTAALAAANRMTPKSLTITATPATADASPEAAAYTASTPAIASSNVVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSEQELQQHKRSVHKLTSASASASASASASASASTSSKMEDDVLMDDEGKPTAAGDQADLSTLSANASGLGVGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQDSLHQQQAALQRAVFRHKTGDDDEEDDDGHQQQQLEEGDSNGGATASASGSAAVAAAASAQAALKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQVSVFRLVQRGGRATMDDGRVVSSVAPPTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00488813;
- 80% Identity
- -