Basic Information

Insect: Drosophila jambulina
Gene Symbol: -
Assembly: GCA_018152175.1
Location: JAECXH010000027.1:11533284-11535091[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 9.3 6.8e+02 1.0 0.1 4 16 75 87 75 89 0.87

2 13 0.0009 0.065 13.6 4.3 3 23 239 259 238 259 0.98

3 13 6.2e-06 0.00045 20.4 2.3 3 23 271 291 269 291 0.96

4 13 1.2e-05 0.00086 19.5 1.1 1 23 297 319 297 319 0.99

5 13 4.9e-06 0.00035 20.7 2.0 1 23 325 347 325 347 0.98

6 13 1e-07 7.4e-06 26.0 0.6 1 23 353 375 353 375 0.99

7 13 1.3e-05 0.00091 19.5 5.2 1 23 381 403 381 403 0.99

8 13 3.4e-08 2.4e-06 27.5 3.2 1 23 409 431 409 431 0.99

9 13 4.9e-07 3.5e-05 23.9 5.9 1 23 437 459 437 459 0.99

10 13 2.2e-05 0.0016 18.7 1.8 1 23 465 487 465 487 0.98

11 13 0.0055 0.4 11.1 3.0 1 23 495 517 495 517 0.98

12 13 0.00072 0.053 13.9 1.1 1 23 527 549 527 549 0.97

13 13 2.4e-05 0.0018 18.5 0.9 1 23 554 576 554 576 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	9.3	6.8e+02	1.0	0.1	4	16	75	87	75	89	0.87
2	13	0.0009	0.065	13.6	4.3	3	23	239	259	238	259	0.98
3	13	6.2e-06	0.00045	20.4	2.3	3	23	271	291	269	291	0.96
4	13	1.2e-05	0.00086	19.5	1.1	1	23	297	319	297	319	0.99
5	13	4.9e-06	0.00035	20.7	2.0	1	23	325	347	325	347	0.98
6	13	1e-07	7.4e-06	26.0	0.6	1	23	353	375	353	375	0.99
7	13	1.3e-05	0.00091	19.5	5.2	1	23	381	403	381	403	0.99
8	13	3.4e-08	2.4e-06	27.5	3.2	1	23	409	431	409	431	0.99
9	13	4.9e-07	3.5e-05	23.9	5.9	1	23	437	459	437	459	0.99
10	13	2.2e-05	0.0016	18.7	1.8	1	23	465	487	465	487	0.98
11	13	0.0055	0.4	11.1	3.0	1	23	495	517	495	517	0.98
12	13	0.00072	0.053	13.9	1.1	1	23	527	549	527	549	0.97
13	13	2.4e-05	0.0018	18.5	0.9	1	23	554	576	554	576	0.98

Sequence Information

Coding Sequence: ATGGAAAGATTGGACGGCGCCAGCATGGAGAAGAACTGCAGGGTCTGTGCTGGCCACTCGACGGTACTGGTGGATCCCTTCTCCACGGAAATCTCTGATCCGCCGATTTCGGAAATGCTTAACTCGATTCTGGCCGAGAACTGCCGCGTCAATAGGGATGGCCTGCCCCAGAAAATCTGTCCAGCCTGCCTGGTGGCCGCACAGCAAGCGTTCCACTTCAAGCACAAGTGCGAGAGAAGCTATCGTTACTTTTACCACCTCGTCACTGCGGCAAACTCCAAAGGCGAGATTCTGGATAAGAGGCGAGGCAGGAGTGCTGTAAAGGAACCGACCATTGCCTTTGAGGTGGTCGGCTGTGAGGACCCGCTGGACACCACAGAGCTGCCGAAAAGCGAAGGGGAAGATGGTGAACTTGTTGTGAAGGATGATAACGATTCCAAACCGGCGGAGGTCGCTGCAGACTTGCACGTAGTTTTCAAATTGGATATGAATAATGACATAAAGTTGGAGAAAGAGCAGATGCCCTACAGGGCTGCAACCGACGGAGCGGATGAACACGCCGAAGAAGAGGACGCGGAGGATGAGGACGAGAACGAGGATGACGACGAGAGAGATGATTGGTCCGATGGGTGGTCCGAAGACCAAGAGGAGCCCAGTACGGCTCGCGATTCAGAGACCAAGCCACGGGCTGTCGAGAAGGATCTATCGCTGCTGTGCACCGAGTGCGGATTGACCTGCAAGTCGCATAAGTTGCTGACCAGGCACATTGCGCGCCACAAGGAGAATGAGGATCCGCAGCGACCGCACTTGTGCGACACCTGTGGCCGGGGCTTCAGGACAAAGGCGCAGCTTACAATCCACACCCGAAGGCACACGGGAGAGCGACCCTTTAAATGTACCATCTGCCCGAAGGCGTACACGCACGGTCCGACGCTCAGGATGCACATGCTGACCCACGACGAGACGAAGGCCCACAAGTGCTTGGATTGCGAGAAATCCTTCTACAGCATCTCCAGTCTGAGGGCTCATCAGCGGTGGCATTCGGGCGACCGACCGTACCAGTGTCCCGACTGTCCGCAGACCTTCACCAAGAACTCCGGACTGAAGCTCCACCAGCGCCTTCACACGGGTGAGCGTCCCTACAAGTGTCACTTGTGTGACCAAGGGTTCGTCCAGAACCACCATCTCGTCACCCACCTACGCGTCCACAACAAGGATCGGCAGTTCAAGTGTCCCGACTGCGACAAGTCCTTCTTCGAGAAGTCCAACATGAAGAAGCATCAGCGCACCCATTCGGATGTAAAGCCGTTTCAGTGCGAGGAGTGCGGCCGCGGCTTCTCGCATAATCACCACCTAAAGAACCATCTCCGCGTGCACACCGGCGAGAAGCCCTATAAGTGCGACAGGTGCGGCAAGCGGTTCTGTGCGAATCAGTCGCTCGCGAAGCACATTCTCTGGCACGCAGAGAACCAGGATCGCGCCTACAATTGCTTCAAATGTCACAAGGGCTTCGACAAAATCCAGGGGTTACGAGCGCACGAGAAAAAGCACCGGAGACAAGACGAGCCGAATCAGCTGTACCAGTGTCCGCACTGCGACGTCAAATTCGCCCTGAAGAAGACCATGGACAAACACATTGGCAGTCATAAAATTAGGCCCTATCCGTGTTCAGAATGTCCGGAGGGCTTCTTCTCCCAAAAGAGCTACAAGAAGCACCTGCGACTGCATAATCCCAAGAACTGGTAG
Protein Sequence: MERLDGASMEKNCRVCAGHSTVLVDPFSTEISDPPISEMLNSILAENCRVNRDGLPQKICPACLVAAQQAFHFKHKCERSYRYFYHLVTAANSKGEILDKRRGRSAVKEPTIAFEVVGCEDPLDTTELPKSEGEDGELVVKDDNDSKPAEVAADLHVVFKLDMNNDIKLEKEQMPYRAATDGADEHAEEEDAEDEDENEDDDERDDWSDGWSEDQEEPSTARDSETKPRAVEKDLSLLCTECGLTCKSHKLLTRHIARHKENEDPQRPHLCDTCGRGFRTKAQLTIHTRRHTGERPFKCTICPKAYTHGPTLRMHMLTHDETKAHKCLDCEKSFYSISSLRAHQRWHSGDRPYQCPDCPQTFTKNSGLKLHQRLHTGERPYKCHLCDQGFVQNHHLVTHLRVHNKDRQFKCPDCDKSFFEKSNMKKHQRTHSDVKPFQCEECGRGFSHNHHLKNHLRVHTGEKPYKCDRCGKRFCANQSLAKHILWHAENQDRAYNCFKCHKGFDKIQGLRAHEKKHRRQDEPNQLYQCPHCDVKFALKKTMDKHIGSHKIRPYPCSECPEGFFSQKSYKKHLRLHNPKNW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527456;
90% Identity: iTF_00593961;
80% Identity: -