Basic Information

Gene Symbol
ncor1
Assembly
GCA_018152175.1
Location
JAECXH010000006.1:459734-471240[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-08 9.5e-05 22.3 0.0 3 43 368 408 367 410 0.97

Sequence Information

Coding Sequence
ATGAGCGAAGAGAAGAACTGCAATATTCAACACAAGGCGTGGCTGAAGAAGAAGAGGAGGCAGAAGCAAAAGCAAAAGCAGAAGCCGGAGAAGAGGCAGAAGATGATGATGATGATGATAAAGTGGGCGGGAAAACTGTGGGGAAAAGTGGAGGCCATCTCGCCAACGCTGCCCAGCGATAATGCCATCGAGGAGCGTGGTCGGACCAGCGCCAAGGAGGAACTGCTCATGAAGATCCAAAAGGTGGACAATGACATCAAGTCCGCCGAGACAACCATGGAGACGTTGCGTAAGAAGGAGAAGAGCCTCATGGAGGAGGCGGCCCTGGCCAAGCAGCAAAAGGCCGCCAAGGATGTGGTGGCTAATAACAACAATAATAACAACAATAACAACAACAACAACAATAACGAACAGAATGAAGTTGTGGAGCTGGCCTGGCGCGGCCAAATGCTAGCGGAGAAGATCTATGCGGCCAATAGGAAGACGGCCCATGACCAACATTCCAAACTGCTGCAGATTGCAGTGGCGACGACGTCAACGACGACCACGACCACGACGAACCAGCCCAGCGATGCCCTGAGCATACGACCCTGGCTGCCGCTGTATAACCAACCCGTGGATGTGGAGGCCCTAACCGTGCTTATACGCCAGCATCAGAGTCAGGTCCGTGCGCCCCTACTGCTGCACATCCAAAAGCTAAAGGCCGAACGCTGGCTGCACAACCAGGGGCTCGTGGAGAAGTACACCAAGGAGCAGGCCGACTGGCAGCGGCGCTGCGAGCGGATGGAGGGCAGTGCCAAGCGGAAGGCGCGCGAGGCCAAGAACCGCGAGTCCTTTGAGAAAGTATTCACGGAGCTGCGCAAGCAGCGCGAGGATAAAGAGCGCTTTAATCGCGTCGGCTCCCGCATCAAGTCCGAAGCGGATCTCGAAGAGATCATGGACGGACTGCAGGAGCAGGCCCTCGAGGACAAGAAGATGCGTTCGTATGCCGTCATACCGCCCCTGATGTACGATGCCCGCCAGCGGCGATGCGTCTACCACAACGAGAACGGACGCATCGAGGACATGATGGCAGAGCATCAGCAGCGCAAGGCCCTCAATATGTGGACAGCGGGCGAGAAGGAGACCTTCAAGGAGAAGTATCTGCAGCATCCGAAGAACTTTGGGGCCATTGCCGCCAGCTTGGATCGCAAGTCGCCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAGCTGCTGCGCAAGTCCCGCCAGCGCACGCGCAGCTCCCGCAATCCGGCCAAGGCCCAGGCCGCTCAGCCGCAGTGCATCATTGATTCGATGACCACGGGCGTCATGACGCGCCTCCAGCGCGAACAGCAACAGAAGTCCGGCAATCGATCCTCGGCCGTTGCCGAACGTGAGCGGGCGGAACGGGCCGCCGAACGGGAACGTGTGGCGGAGAAGGCTGCCGCGGATGCGGCCAAGGCGGCGGAGAGTGCCGCGGAGAAGGCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGGCAGCAGGAGCGGGAACGGTGGCCACAACAGCCGTTGCTCCAACGGGCGGCACCACACCTGCATCCACAAACGCCTCAGCAGCAGCACCCACACCATCAGAGATCTCAACGAGCGGCGGCAGCGAGGCTGCTGCCAAGAGTAGCAAGGCCGCCGATGACGAGGCAGCAGCAGGAGGAACGACATCCGGAGGAGCAGCAGCCACAGTGGCAGCCACGGCTGGCCATACACCAGCCAGTGCAACGGCAGCCAGTGCCACCAATCTGGCATCCGAGGGCAGCACAGGCACGACAACGGGTGCCACGGCCACCGGCGTCGGCGTCAAGGGATCTGGCAAGCCAGAGACGGCCGCCGAGTCGGCGGCGGGAACAGCGGCCAAAGGTGCCGATGCGGGCACAGAAGCTAACACAGATCCTCTGGCCAAAACGCTAGGTGCTCCCAGCAAAGAGAATGCTACCGGCGGCACCACATCAGCTGCCCCAACGCCGGCACAGGGCGTAACCTTAAATGGCTTCAAGACCGGCTACCAGACCGTGGTCATGGCCAATGTGAAGGCGTCGGCGCCAGGAGCAGGCGAAGATTCGGCCTCCAGTGGCGGAGCAGCAGGAGCAGCAACGGGAGCAGCGAAGAATGCGGCAACGGCAACTGGTGTTGGCGGCGGCAACAGCAACGATAAAATCGTCAAGACAACGCCAACATCGGGCGCTGTTACGAATTCAACAAGTACTCCCTCAGAGAGTGGTGGAGGAGGAGCACCGGGTGTCCCCACTTTGACCACTGCCACAACGGCGGGCAATTATCTTGGCCAGAAACTGAAGGCGGCACAAGTGGAGGGACTCGGGGCGGGCAATGATCTGCATGCGGATGTTAGTGACTCCAAGCGGAAGCGCTTCGAAATGAATGCTGGCGGCGAGGGCCAGCAAGTGGGTGGAGCAAATGCCACCAATAGCCACAACAGCAATAACAACCTGAAGGCCAATGCCAAGGATGTGTCGATGGTCAAGGCCTCTGCCGCTGGCCCCGCTTCGGTATCATCATCCTCATCATCCGGATCAGCGGCATCCTCTGTGGTTACCTCCACGGCGGCATCTTCGTCCGGCTCCATTCTACTGATCAGTGCCGCCTCCATAATGTCCACCGCATCTGGTTCGGGATCTACAGGATCAACGGCGGCCACTGCTCCGGCGATCTCAATGCCCCTGCTATCGGATGGTAGCGAGATTATAGCTTTGGATGGGAAAGATCGATTTGTCTCAAAAAAGATACAAGGATAG
Protein Sequence
MSEEKNCNIQHKAWLKKKRRQKQKQKQKPEKRQKMMMMMIKWAGKLWGKVEAISPTLPSDNAIEERGRTSAKEELLMKIQKVDNDIKSAETTMETLRKKEKSLMEEAALAKQQKAAKDVVANNNNNNNNNNNNNNNEQNEVVELAWRGQMLAEKIYAANRKTAHDQHSKLLQIAVATTSTTTTTTTNQPSDALSIRPWLPLYNQPVDVEALTVLIRQHQSQVRAPLLLHIQKLKAERWLHNQGLVEKYTKEQADWQRRCERMEGSAKRKAREAKNRESFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMYDARQRRCVYHNENGRIEDMMAEHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSMTTGVMTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAESAAEKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGAGTVATTAVAPTGGTTPASTNASAAAPTPSEISTSGGSEAAAKSSKAADDEAAAGGTTSGGAAATVAATAGHTPASATAASATNLASEGSTGTTTGATATGVGVKGSGKPETAAESAAGTAAKGADAGTEANTDPLAKTLGAPSKENATGGTTSAAPTPAQGVTLNGFKTGYQTVVMANVKASAPGAGEDSASSGGAAGAATGAAKNAATATGVGGGNSNDKIVKTTPTSGAVTNSTSTPSESGGGGAPGVPTLTTATTAGNYLGQKLKAAQVEGLGAGNDLHADVSDSKRKRFEMNAGGEGQQVGGANATNSHNSNNNLKANAKDVSMVKASAAGPASVSSSSSSGSAASSVVTSTAASSSGSILLISAASIMSTASGSGSTGSTAATAPAISMPLLSDGSEIIALDGKDRFVSKKIQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00617584;
90% Identity
-
80% Identity
-