Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_018152175.1
Location
JAECXH010000012.1:15674977-15679546[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-14 1.3e-11 44.3 0.2 3 44 658 699 656 701 0.95

Sequence Information

Coding Sequence
ATGAACACACTGGGTCCTAAGAAGGACGGAAGTCCGAATATTGACTTTTTCCAGTCCCCGGAGACGCTGCAGGGCTTCGAATCCATCCGACAGTGGCTGCAAAAAAACTGCAAGAAGTATCTGGCCCACAGCTCGGAGCCCATCACGAAGGAGTCTCTGGCCCAGCTGCTGATCCACTTTCTGCAGTATGTGGAGGCGAAGCTCGGCAAGAATTCGGCGGAGCCGCCGGCGACTAGAATTCCGATGCGCTGCTTTCTGGACTTCAAGAGCGGCGGTGGCCTATGCATAATTTTCTCGACGATGTTCCGCTTCCGGGCGGAGCAGCGCGGCAAGAAGTTCGACTTTTCCATCGGAAAGAACCCCACGCGCAAGGATCCCAATATCCAACTGCTGATCGAGATCGAGCAGGCCCTGGTAGAGGCGGACCTCTACCGCATTCCGTACATTTACATCCGGCCTGAGATCGAGAAGAGCTTCGAGGGGCGGCTGCGAGAGATCCTTGACAACCGGCGGGTGGAGATCGTTTCGGACGAGGAGGAATCCACCCATATTGTCTACCCCATCGTGGATCCCCATCCCGACGAGTACGCACGGCCAATCTTCAAGCGCGGGGGCCATGTAATGCTGCACTGGTACTACTTCCCAGAGTCCTACGATTCCTGGGCCGTGAACAGCTTTGACTTGCCGGATCACATTCCGGAGAATCCCGAGTCGCCGGCGGAGCGCTGGCGCGTTTCTGCCTCCTGGATCTTGGACCTGGAGCAGTACAACGAGTGGATGGCTGAGGAGGATTACGAGGTTGACGAGCATGGCAAGAAAAAGACGCACAAGCAGCGCATGTCCATCGACGACATCATGTCCTTTGGCGACGAGAAAAAGAAGCCTGCTACCAGTTCTGGTGGCGGCAAGCAGAAGCGACGCCGTTCGCCATCGCCAGCCACGTCCGCATCCACCTCTTCCTCGAAGCCGGGCAAGCGTAAGCGATCCCCTGCCGTTGTACACAAAAAGTCCCGCAATGAGGATGACGACGAAGACCTTACCCGTGACCTGGACGATCCGCCGGCCGAGCCCAATGTTCAGGAGGTGCACAAAGCTAACGCCGCGCTGCAGTCAACGGCCAGCCCGGCTCCGGGTGGCAAATCTCGTGCGGACAACGATATGATGCCTATTAAGGGTGGCACAATGACCGACCTGGACGACGAAATGACTGGAGGAAGTGCTGCCCAAGCCATGTCCACTGGAGATGGGGACAACTCGCAGACGGGCAAGACGAGCGACAACAGCAACACACAGGAGTTCTCCTCGTCGGCCAAGGAGGACATGGAGGATAATGTCACCGAGCAGACGCACCACATCATTGTGCCCTCGTACTCGGCCTGGTTTGACTACAACTCCATTCACGTTATCGAAAAGCGGGCTATGCCGGAGTTCTTCAACAGCAAGAACAAGTCCAAGACGCCGGAGATTTACATGGCGTACAGGAACTTTATGATCGATACCTACAGGCTCAATCCGACGGAGTACTTGACCAGCACCGCCTGTCGGCGCAATTTGGCTGGAGATGTGTGTGCTATTATGCGGGTCCACGCATTCCTTGAGCAATGGGGACTGATCAACTACCAGATCGATGCGGATCTACGTCCGACGCCAATGGGTCCGCCTCCGACCTCCCATTTCCACATTCTTTCGGATACACCATCGGGTCTGCAGGCTATTAACCCACAAAAGACTCAACAGCCGTCGGCGGCCAAGACTCTGCTCGATCTTGACAAGAAGCCACTGGGCAAGGATGGCGGTTTGGAACTGGGCGACAAGGGAGGCCTGGCTGGCATTAAGACAGAGGCTCTCGAGAACGGAAGCGCCGGAGCAGGAGGATTGAGTTCAGGAGTCAGCCAGTTTGGCCTCAAGCTGGATCAGTATGCAAAGAAGCCGGCGGCCATGAGGAATCGCACAGCGGCCAGCATGGCGCGGGAGTGGACCGACCAGGAAACGCTGTTGTTGCTTGAGGGGCTTGAGATGCACAAGGACGACTGGAATAAAGTGTGCGAGCACGTCGGCTCGCGAACCCAGGATGAGTGCATCCTTCACTTCCTGCGGTTGCCAATTGAGGATCCGTATCTAGAGGATGATGGTGGCTTCTTGGGTCCATTGGGCTGCCAGCCGATTCCGTTTAGCAAGAGCGGCAACCCCATCATGTCCACCGTGGCCTTCTTGGCATCTGTGGTCGATCCTCGTGTCGCTGCAGCTGCCGCCAAGGCTGCCATGGAAGAGTTTGCTGCAATTAAGGACGAGGTGCCCGCCACCATTATGGACAACCACATGAAGAATGTGGAGAAAGCCTCCGCGGCCGGAAAATTCAATCCCAACTTTGGTCTTGCCAACAGTGGAATAGCCGGAACAGGCAACGATAAGGAGGACGAAGAAGGCAAGGAGGGAGCCTCTGCAGCAGCTGCTGGCGGACCTGATGAAGACATGAAGGATCTAAGCAAAAAAGACGACGATGCCAAGTCCAAAGACAAAACGAAATCGGATAAGACCAACACGAACACAGACTCGAGTTCCACATCATCATCGTCAGCGTCAGGCAACACCAACAACACCGACAAGAAACTAAAGGAGTCGTCCGCCTCCTCGCCTTCGGGCGACAAGTCGGCCAGCAAGTCAGACAAATCAACAAACAAATCCTCACCCACAGACCCAACCGCCTCAGCCGGTGGAGCCGCCGATGTGGACATCAAGACGGAGGACAGCAGCGGAGATGGCGAGACCAAGGACGGCGGCAGCGATGGCAAGGAGGGATCAGGTACAGGCGCCAGTACAGGGGCCGCGACCAAGGAAGGAGCCTTCAGTGAAAACAACATGCAAACAGCGGCGGCGGCAGCTCTGGCATCCGCAGCAGTCAAGGCCAAACACTTGGCTGCTTTGGAGGAGCGCAAGATCAAATCCCTGGTGGCGCTGCTCGTCGAGACCCAAATGAAGAAGCTGGAGATTAAATTGCGGCACTTTGAAGAGCTGGAGGCCACCATGGAGAGGGAGCGCGAAGGCCTAGAGTACCAGCGCCAGCAGCTTATCACGGAGCGCCAGCAGTTCCACTTGGAGCAGCTAAAGGCGGCTGAATTCCGGGCCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGCCGGATCCGTAGCTCCGCCGCCCAACGGCGCTACCTTTCCAGCACCACCAGCTGTGGCCGCAGGTGGACCCCCACCACCTGGAGCACCCTCGGCCTTAGCCGCGACACCCAACGAGCAGGGAGGGGTAGCAGCAACAGCAGCGCAATCTCAGGGACCCACACCAATGGATACCACACCAGCAAGCAGCGTCCCAGTTGCAGAGGCCAGCGGCGCCCCCCCGGGATCAGTGCCCCCCGCAGCCGCCGTCAGCATTCCTCCCGCAAGCACTGTTCCAGTCGCCGGAACCGCTCCTCCTTCTTAA
Protein Sequence
MNTLGPKKDGSPNIDFFQSPETLQGFESIRQWLQKNCKKYLAHSSEPITKESLAQLLIHFLQYVEAKLGKNSAEPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSIGKNPTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEGRLREILDNRRVEIVSDEEESTHIVYPIVDPHPDEYARPIFKRGGHVMLHWYYFPESYDSWAVNSFDLPDHIPENPESPAERWRVSASWILDLEQYNEWMAEEDYEVDEHGKKKTHKQRMSIDDIMSFGDEKKKPATSSGGGKQKRRRSPSPATSASTSSSKPGKRKRSPAVVHKKSRNEDDDEDLTRDLDDPPAEPNVQEVHKANAALQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQAMSTGDGDNSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKDGGLELGDKGGLAGIKTEALENGSAGAGGLSSGVSQFGLKLDQYAKKPAAMRNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAAGKFNPNFGLANSGIAGTGNDKEDEEGKEGASAAAAGGPDEDMKDLSKKDDDAKSKDKTKSDKTNTNTDSSSTSSSSASGNTNNTDKKLKESSASSPSGDKSASKSDKSTNKSSPTDPTASAGGAADVDIKTEDSSGDGETKDGGSDGKEGSGTGASTGAATKEGAFSENNMQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAGSVAPPPNGATFPAPPAVAAGGPPPPGAPSALAATPNEQGGVAATAAQSQGPTPMDTTPASSVPVAEASGAPPGSVPPAAAVSIPPASTVPVAGTAPPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2