Dins006999.1
Basic Information
- Insect
- Drosophila insularis
- Gene Symbol
- -
- Assembly
- GCA_018903935.1
- Location
- JAEIFP010002295.1:2660951-2664930[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.2e-05 0.0025 18.2 0.1 1 23 172 195 172 195 0.96 2 13 0.0045 0.35 11.4 3.2 2 23 244 266 240 266 0.89 3 13 0.007 0.55 10.8 0.8 1 23 369 392 369 392 0.93 4 13 0.054 4.3 8.0 6.6 2 23 441 462 440 463 0.94 5 13 0.0038 0.3 11.7 0.7 1 23 520 543 520 543 0.88 6 13 6.8 5.4e+02 1.4 0.0 2 13 562 573 561 578 0.81 7 13 0.00076 0.06 13.9 3.5 2 23 594 616 594 616 0.96 8 13 0.037 2.9 8.5 0.9 1 23 698 721 698 721 0.96 9 13 0.00063 0.05 14.1 0.2 1 23 772 795 772 795 0.93 10 13 0.0011 0.083 13.4 2.2 2 23 845 867 844 867 0.97 11 13 0.0073 0.57 10.8 1.7 1 23 959 982 959 982 0.92 12 13 0.048 3.8 8.2 1.5 1 21 1034 1054 1034 1055 0.95 13 13 6.8 5.4e+02 1.4 0.6 1 12 1145 1156 1145 1169 0.66
Sequence Information
- Coding Sequence
- ATGGAAGGCATGGACCTGTGGACGTCAATGTTCTCCAATGATTTTGAGGAGGGTGAGGAGAGCGAACAATATGGCAATGGAACGGGAACGGGTGTAAAGTCTTCGGCGGACACAGACGATATTATGGCCGAGGCTTACGATGGCGATGAAGGTGTTGATGATGACGATGACGACCTTATGGAAATGGAGGATAATGGCGAAATGGAGACCACCGAGGAGGGAGGTAGAAATGGCAAGCAAAAGGGACCTGAACCTGACGATGATGCCATATTTGATTTCGAGCTGGAACCGATTGTAAGCATAGCAGAGCATTCATCACCCCCATTAGGGCCAGCTGGCCCTACTTCAACTCCAGTGCGTCCCATGCATCGAAATTCATTGCCAGCAGGTAGTTCGATATCGGGACGGCCGAAGGAAACGCGTTTATCTAGCGTTCAAATGCGCCCAACCACCTCCCAAATAAATGCCACCGACGAGCATGGTGTTCCCATTAATTACGAACTGGGTGTAATCTACATTTGTCCAGCATGTGGAGCGGAATTTCGGCAACAGGACCAATGGAAGCGTCACATGAACCAAATGCATCAATTCAACACGCGCCGTGGTCTCAATTTCGTGGCCATGGATAAGCTATATCAACGATGTCTGGAGTGTAACAAACGCATTGCTATGCACAGTCGTGAGAATCTTTTAAAGCACAAGTTCACCCATTTGCCATATCGTTGCACAAAGTGCTACTTATGCAAAAGGGAGTACAAATATAGACAAGATTTGATGGTTCACCTGCGAATGGTGCATTGTGAGGAGATAGTGAACATGATGCGGGGTGGCTACTCGGCAGCGGGACGTAAGACACGTGTTAGAGAGCCACGCACTGAGCGAAAGGAGTTCTGTCCCGACGATGACGATGCTATTGAAGTGAGGAATGAAGTGCTCGAACCTGATCTGGATGACTCTAGTTTCGGTGTGTCGTCCACTTCATTTATGGAAGAAGATCAACAACAAAACTCAACTCCTCAGCCCATGTCAGCCAAGCGAAAGCGCAGTCATCCTTCGGGAAACGGTAGTGGTGGGGCCACTGAACTGTGTGAGGATTATATACATTATATGTGTCCGGATTGTGGAACAGAGTGCGAAAATCATGCCCAATGGAGCCAGCACATTGAGTTTGTGCATGATTATGTCAGTCGTCGGGGACTCAACTTTAGGAGCGTTGACATGCAGATGCAGTGCTTGGAATGCAAGCAGATTGTTACTCCTAACACGATTAAAACTCTGAGAGCTCACAAATTCAGTCATCTTCCGCAGCCAGAGTGGCTGCGTTGCAAGCTGTGCTACAAGAGCTATACGGAGCATCATGAGTTGGTCACTCATTTATTGAAACATCACAATCTGGAGACACTGATACCAGCCGATGGATCAGAGGACCAATTGCTGAATAGTGCAGCAGATGAGGACGGAGGAGATGGCAGTGAAATGATCTTCGATGATGCCGATGATGTACGTAGACGTGGTGGAAGGATAAGTAGCGATGATATCTATGAGCCGCACATCGATTACCTTTGTCCGCAGTGCGGCAAAGAGTTTATGGAGAAGAAACATTGGCGCACCCATGTGGTCCAAGTGCATGGCATGAATGATATAACAAAGCTGAACTTTGAGATTATATCCGAGCGGCAGTTGAAGTGCACGGAATGCGAGAAGATCATCACGAATGCCTATGGGATACAGAATGCCCAACAGCATAGGATAACGCATTTACCATTTAAGGCCTATGCCAGGTGTCGCAAGTGCCACAAGACGTATACGGATCGCAAGGGATTGGTCAAACATTTGGCCACATATCATCGTGTAGGCTGGGAGACTGGACGAAAGTCTGGCGTAAGTGGCGATGCTCCTCTGGCGTCAAAGCAACCGCGTAAACAAATTGTTACAGTGGCTAATGAAACATATGAGATTATATATTTGGATGAGGAGCCGAGCAATGTGGAGGAGAATGACTTTGGTGAACAAATGCAGGCGGATGACGATGAGTATGCGCCTGCTCCACCTCCTCCGCCAGTCCCACCACCTAATCCTCCTCCCAATCGCTTCAAGTGTTCGGATTGTGGTTCGATACACACTACACAAATGGCTCTCAAGATGCACATCAAAGAGGAGCATGGGTTAAAGGAATCCAAGCATATTTCAAAGAAATACGCCGAATCTAAGGAGGAAAAGAAAAGGAACAGTGCTGCTTCAGCTTCTTCCACACACACTTCAAACGCCACCTCCATGCGTTCTCCAGGCACTACAATTGAGCAGAATTATATTTTCTTATGCCCATCCTGCGGTGAGGAGTACAAGACGCAATTTGAGTGGCGTCGCCACATCAACGAAGCCCACAACTTCGATAAAAGAGAGTACTTGAATATGCGGCAATTGGACAAATATCGATATCAGTGTACCCAGTGCAAGGACATTGTCTGCAACTCGAAATTAAAGGGACTACAAGACCATCACTTCCGGCATTTGCCCTACCGTTTGTATCTGAAGTGCTTAGTCTGTGGCACTTGCTACAATCACAAGCCGAATATAGCAGCTCATCTCCGGACACGTCATAATATCTTTGAGCGGGAGACGCCTTGGAGAGAGCAACGCAATAAACCGCAATATGCATACGTTCAATCGAAGGATTCGACAGAATCAAAGGAAAAGAGAAGCCACCGGCCCGAGTCACCAGTTGCTTCTTCATCGTCGTCATCGGTTTCGGCTATGGGCAGCAGCCGCACGCTGAAGCCCCAACCAGGCGGATTACCCACTCGGCCCGCTGGACTAAACACGCTGGAGGATAGCATTTCGTATCACAATGCTGTCGATCTGGATTTCATCACATATTACTGCCCAAAATGTAATCAGAACTTTGATTCGCATGCATTCTGGCGCAAACACATTGTGGAGCAGCATAATTTCAATTGCCGGGAGGGCCTTAACTTTAGGCAGATTGACAACCATCATTACTTATGCCTGGAGTGTTATAAGCGGGTTACGGTCACCCACACTAAGGGCGCGATTGGCCAGCTTCAGTCGCACAAATTCCGTCATCTGCCGTATCGCTCTTTCAAGTGCTTGACCTGCAATGGCGAATTTGTGCGCAAGCAAATGTTCTTTAAGCATTTGAACAGGGATACCAATAGATGCGATAACCGACCCAGCGGACCAGATGCTGCAGTCATCGATGATGATGATCAGGATGCGGCAAATACCGCAGGTGGCGATGTGGTGACTGTGGAAGATGAGGAAGTGGATCCTTCCGCCTATCGTTTAATGTGCCCGCAATGTGGTGACAATATCGACACAAGCAGCAAAGCAGTTTGGCGGGAGCACATTAACATCTACCATGGCCTGGGCAAGAAGGAACTCTTACATATGCGAAAAATTGGCGATGATCTCTATCGATGCTATGACTGCGATGAGGAGCTGCAGACGAAGAAGCTTCGTGTGCTTCAGCAGCATCGTTTCCGACATCTGCCTTATGCCGCGTACATACGATGCTTGCTCTGCGAAAATCAAGAGGGCGATGATGCCATTGATGCTGCAGCCGGTCTGCACAGTATGCGGGAATTGCAGCAGCATATACGGGAACATCACCCGGCGATCGAGGACAGCGATGAGCAAATGCAGAATGTGCGTCAACAGGCCGCCGAAGAGGAGGCTGACGAGGACAGTCGCTTGGAGAACGAGACGGCAGCCAGTTCGGGTTCGGGTAATGGTCCATACATGCCTCTGCCACCGCATTTGTTGGATGATACCGATGATTTCGAGGAACAATATTTACTTGGATAG
- Protein Sequence
- MEGMDLWTSMFSNDFEEGEESEQYGNGTGTGVKSSADTDDIMAEAYDGDEGVDDDDDDLMEMEDNGEMETTEEGGRNGKQKGPEPDDDAIFDFELEPIVSIAEHSSPPLGPAGPTSTPVRPMHRNSLPAGSSISGRPKETRLSSVQMRPTTSQINATDEHGVPINYELGVIYICPACGAEFRQQDQWKRHMNQMHQFNTRRGLNFVAMDKLYQRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYLCKREYKYRQDLMVHLRMVHCEEIVNMMRGGYSAAGRKTRVREPRTERKEFCPDDDDAIEVRNEVLEPDLDDSSFGVSSTSFMEEDQQQNSTPQPMSAKRKRSHPSGNGSGGATELCEDYIHYMCPDCGTECENHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKQIVTPNTIKTLRAHKFSHLPQPEWLRCKLCYKSYTEHHELVTHLLKHHNLETLIPADGSEDQLLNSAADEDGGDGSEMIFDDADDVRRRGGRISSDDIYEPHIDYLCPQCGKEFMEKKHWRTHVVQVHGMNDITKLNFEIISERQLKCTECEKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKTYTDRKGLVKHLATYHRVGWETGRKSGVSGDAPLASKQPRKQIVTVANETYEIIYLDEEPSNVEENDFGEQMQADDDEYAPAPPPPPVPPPNPPPNRFKCSDCGSIHTTQMALKMHIKEEHGLKESKHISKKYAESKEEKKRNSAASASSTHTSNATSMRSPGTTIEQNYIFLCPSCGEEYKTQFEWRRHINEAHNFDKREYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIFERETPWREQRNKPQYAYVQSKDSTESKEKRSHRPESPVASSSSSSVSAMGSSRTLKPQPGGLPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNQNFDSHAFWRKHIVEQHNFNCREGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNRPSGPDAAVIDDDDQDAANTAGGDVVTVEDEEVDPSAYRLMCPQCGDNIDTSSKAVWREHINIYHGLGKKELLHMRKIGDDLYRCYDCDEELQTKKLRVLQQHRFRHLPYAAYIRCLLCENQEGDDAIDAAAGLHSMRELQQHIREHHPAIEDSDEQMQNVRQQAAEEEADEDSRLENETAASSGSGNGPYMPLPPHLLDDTDDFEEQYLLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00503590;
- 90% Identity
- -
- 80% Identity
- -