Dins011526.1
Basic Information
- Insect
- Drosophila insularis
- Gene Symbol
- -
- Assembly
- GCA_018903935.1
- Location
- JAEIFP010001763.1:7071684-7077513[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0003 0.024 15.1 2.0 1 23 158 180 158 180 0.97 2 13 0.64 50 4.7 1.6 3 23 188 209 187 209 0.93 3 13 0.00033 0.026 15.0 2.1 1 23 366 388 366 388 0.98 4 13 0.00097 0.077 13.5 1.9 3 23 742 762 741 762 0.92 5 13 0.039 3.1 8.5 1.4 1 23 768 791 768 791 0.98 6 13 1.2 95 3.8 1.6 2 23 828 849 827 850 0.92 7 13 0.0034 0.27 11.8 0.8 1 23 871 894 871 894 0.97 8 13 0.00089 0.07 13.7 0.9 1 23 1027 1050 1027 1050 0.90 9 13 0.051 4 8.1 7.4 1 23 1062 1084 1062 1084 0.98 10 13 1.1e-05 0.00086 19.7 2.2 1 23 1089 1112 1089 1112 0.97 11 13 0.00053 0.042 14.4 4.1 1 23 1125 1150 1125 1150 0.95 12 13 2e-06 0.00016 22.0 0.1 1 23 1155 1177 1155 1177 0.98 13 13 1.2e-05 0.00095 19.5 0.3 1 23 1184 1207 1184 1207 0.97
Sequence Information
- Coding Sequence
- ATGCCAATGCCAAGTCAAATCGAGAGAAGGAGCAATGAAAAGGCGAAAGCGGAGCTTCAGTCCATCAAGTCCAATGTAAATTACGAATACGTTTGTCGCTGCTGTCTCAAATCGGACGCGGATTTCGTTCAACTGGATACGTTAATGGTATCGCGAAATCTGGAGGCAAATGATGAATCTGATAAAATCCCTTTATTGCGTTGCTTACTCTTTTGCATACGCACAGATAACAAACCCGATTTGCCCCAAATAATCTGCACGGAGTGTAGCAAGACTTTGCAAATCTCTTACTACTTTCTGCAAAATGCTTTGCGTGCCCATGAGATTCTTTGCCGTAAATTATTTTCAGATAAGCCAACACATTCGCGTTTTGGAGTGCAGCTTAATGGCAATTTTAGACATGAGACGGCGCCAAAGGAAGTTATTTCACCTGACAGCAAGACAAGATCGCTCAAGTCGGGCAATATTCGCCATGAATGCAAAATTTGTGGCACCGTGGTCCACAATCGCATGGAACTTAAGCAGCACATACGCCTGCACAGAGATACAATCATTCAGAATTGCTCACTGTGCATTTTTAGTACGATTAAGCAGAGCCATCTGATGGAACATTATCGAGTGATGCACAACCTAACAACTGCCCAGGCCGAAGATCGCATTAATTTGGAACAACTTGAACAAAAACTACAAGAAGGTCCTAAAGTTTGCACTCTGGAGGATATTGAAATGCTTATACCGACTGTATTAACACCCGAGGATTATGCTCAGCCGAAAAGTGAATACAATATTGAGCCACATTCGATGCCCAATAAGGATACGACTCTAAATAACGTTAGCATTGGCACGGAATTCCTTGTCTTGCCTGATGGATCACTACAACAAGTTAATGGCGGCGGAGTTCTCTTTGAATATATCGATGACAGCAAAAGTAATGCAGCACCCACGGGCAATTTAAATTTACAAACTCTTCTTGGAAATGACAACATTTCCCTCGATCCCATGGATATAGATATTAATGAGCTTATTGTGGAGGAAAATATACCGCAAATAAAAACCAAGCCAAGATCTGCAAAATTGGCAGCTGCTACATTCAAGCATAAGTGCACACTTTGTGCAAAATCATTTCCCACTTTGGCCCGCTTAAAATCTCATCAATTAACCCACAGTAATTTACCCAAATTTCATTGCGATCAGTGTAATTTCTTTACACTGTTTAGTTCTGATCTCGCATATCATCATAGAGTAATGCATCCAGAGACACCGACCCCAGCTCCACCTCCACCTCCACCTCCAGCTCCGGCTGTAGAACAGGGTGAAGGCTTATCATGCGATCTCTGCCTTTTCGAGACACGGATACCAAATGAGCTGTATGACCATTATACTGACAAACACATGGTCCGTCCCACAGAGGTGCAATTGCGCCCTTGTTGGTCTAATGAAATGGCCACAGTGGTAAACCAGGCAGTCCCTCAATTGCCCGCTGATCAAGGGCAAAATATTGTTAATCCTTATGCAGCGGCTGCAGAGCCAATTCTTCCAGAAACCGCCACAGATATTATAATGCATCAGCCGGCACAGGTGAATACAACAGCAACCATAACACCAATGGGGAATATTAGTGTGGTTGTTGATGCAACGCCATTATTTTTTCCCAATGGCACACAAACAGCTGTGACTACAGTTGCCTCACTACCACCACCACCACCACAACTGCAAGCTTCCACAGTTCCAGTTTTTGTGGAAAACAACAATATCAATAGTACCAACAGCACTAGCACCACGACGAACAGCAACACATTTGTTCCAGCCTTTCCAGAAATCTCTGCCAACGATAATCTTGTGGAGACAACTGAGCCAACTATTCCGCCAATCCCGAATCCAAATTTACCATCAACTTTTGGCGATATGCAAGATTTCATCGATAATACAGATGTCGCAGCCATATGCACCATACCAGCGGATGGTATGCCCGTTGTCGACGGCGATGACATAGTTATTGATAATAATAATATAAGCTTAGACTTTGATGCCGAAAATCTCTTTGGTGAATTCGAAGACGAAGAAGAGGGTGAGGGGGAGGAGGAGGAAGAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGTCGAGACATTTGCAAAAACCATATTGCATCTATTGCAACAAAAAGTTTACCAGCCAATACAAATTCGAGAATCACATGTTTGTTCATAGGGGTCTGGCTCCCTATCGATGTGAATTGTGCACAAATCTGTACAATATGAAACGTCTACTTATACGCCATTACAAGACCGTACACAAACGCATGCCCACCCGCGACATGGTCCAGGCAAAGGGAGATAAAATAACCGTAGCTCGTTCAAATAAGGAAACCGTTCAGGCCGATGTCAATAAAAATCCAATGCTTATGTGCGCCAAATGTCCATTTGAGTGTGAGTCGGATGGGGAAATGAAAAAGCATTTAAATGCTCATCATGGCATAAATGATGGTGTTTCCGTACATGCCAATGAAGTGTTCATTATACGCAAATTACCATTTGAGTGCCCACGTTGTATACGTTCGTTTGCTGCCAAACGCACACTAACACGTCATTTGCAACGTAGTCACCTGGTGGACACTATAATTGAGCTAACAATGGCGACGGCCACAGCACCAGCTTCACCAACAGTAACCGCTGCTTCTACATCTTCAACAATTTTCAATACACCGACACACTTCGATTTTGATTATGATTTTATGGGTGATAGTACATCTACGCCCAATGGTAACATCAATACCCCAAATCCTGAATCCAACAATACCAATCCCAGCAGTACTACCACTACTACAAGCAATAACAATAATAATAACAACAACAACACTACTGAAACAGATGGTTATACACCAGCAGCCGAAGGGCTTCCCAGTCATGTACTCAATGGAAGTGACAAATTATTAACAACCGCCACCATGGAGCCATCACCCATTAAGGATGGACGAACGCGTCTTCCACGCACCCCAATCTTTGTGTGCAAATTGTGCAATAAGACATTCGACGAATTGAGTAAACTTGTTAAACATGAAACTGAAACACATTCTGGCGGAGAACCTCGACGTGTTGTCTTTCAGCACAAGTGTTCTACATGTCATGCAACATTTCGTACCCTGACATTGTTGAAATTTCACATGAAACGACATTTGGCACGCCGATTTCAATGCAACCGCTGTCCCAAGTGCTTCATTAAAAAGCCGGAATTGGAGCGACATATTTTAATGAAGCACCCAGAGAAACATGACATGAGCAGCAAAGATAAAGCTTTCAGATGCTCACTGGATGGATGTACGAAAACATTTAATTTTAAACATCATTTGGTTCGCCATCAAAATGCCGTGCATCTGAAGGTTCATTATATCTGCAATGTTTGTGGAAAAGATTTGGTAAATAGTTTTAATTTGAGAGCTCATATGCGGATTCACAGTGGCAATGGACAGTCGTACAAGTGTCCGAATTGTGATAAAACATACGTGCGACGCGGGCCACTCCGACAACATGCTCGACAAGCACATCAACTTGAGCTAACCGAAAGCGATTGGGCCGGAATGTTATGCAATAATGTTCGCTCCAACAATTTGCACATAAAAAAGACTTCGCGTAAGAAGAAAACTGCAGAGGCACCAGAAGCCGGCCATTAA
- Protein Sequence
- MPMPSQIERRSNEKAKAELQSIKSNVNYEYVCRCCLKSDADFVQLDTLMVSRNLEANDESDKIPLLRCLLFCIRTDNKPDLPQIICTECSKTLQISYYFLQNALRAHEILCRKLFSDKPTHSRFGVQLNGNFRHETAPKEVISPDSKTRSLKSGNIRHECKICGTVVHNRMELKQHIRLHRDTIIQNCSLCIFSTIKQSHLMEHYRVMHNLTTAQAEDRINLEQLEQKLQEGPKVCTLEDIEMLIPTVLTPEDYAQPKSEYNIEPHSMPNKDTTLNNVSIGTEFLVLPDGSLQQVNGGGVLFEYIDDSKSNAAPTGNLNLQTLLGNDNISLDPMDIDINELIVEENIPQIKTKPRSAKLAAATFKHKCTLCAKSFPTLARLKSHQLTHSNLPKFHCDQCNFFTLFSSDLAYHHRVMHPETPTPAPPPPPPPAPAVEQGEGLSCDLCLFETRIPNELYDHYTDKHMVRPTEVQLRPCWSNEMATVVNQAVPQLPADQGQNIVNPYAAAAEPILPETATDIIMHQPAQVNTTATITPMGNISVVVDATPLFFPNGTQTAVTTVASLPPPPPQLQASTVPVFVENNNINSTNSTSTTTNSNTFVPAFPEISANDNLVETTEPTIPPIPNPNLPSTFGDMQDFIDNTDVAAICTIPADGMPVVDGDDIVIDNNNISLDFDAENLFGEFEDEEEGEGEEEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKITVARSNKETVQADVNKNPMLMCAKCPFECESDGEMKKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKRTLTRHLQRSHLVDTIIELTMATATAPASPTVTAASTSSTIFNTPTHFDFDYDFMGDSTSTPNGNINTPNPESNNTNPSSTTTTTSNNNNNNNNNTTETDGYTPAAEGLPSHVLNGSDKLLTTATMEPSPIKDGRTRLPRTPIFVCKLCNKTFDELSKLVKHETETHSGGEPRRVVFQHKCSTCHATFRTLTLLKFHMKRHLARRFQCNRCPKCFIKKPELERHILMKHPEKHDMSSKDKAFRCSLDGCTKTFNFKHHLVRHQNAVHLKVHYICNVCGKDLVNSFNLRAHMRIHSGNGQSYKCPNCDKTYVRRGPLRQHARQAHQLELTESDWAGMLCNNVRSNNLHIKKTSRKKKTAEAPEAGH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -