Basic Information

Gene Symbol
-
Assembly
GCA_018903935.1
Location
JAEIFP010000612.1:4498839-4499407[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-08 3.7e-05 24.1 0.2 28 87 45 95 18 97 0.78
2 2 6.2 8.1e+03 -2.7 0.0 72 84 130 142 117 145 0.63

Sequence Information

Coding Sequence
ATGTCGCCATATTTCGAGCAGCAATTCCGGGTGCAATACCTAAGTGAGGCTCAAAGAAACGCCTACTTAAGGGAGAAGGCGGCTTTCCTTCGGCGTCTTATAGCAATGAAGGATCATGACAAAATGCTTCTTACTTATCCTATAGGCCTCTATACCATGCACGAAGCTGTCAAATGGCAGGGCGGTTATAATCGTGTAACCGACTGGCAAGTGGTGGCTCAAATTTGTGAGGTCCAGTACGCCAGCGAGGTTCTGGACGACCTATATGTGAAATTTTTGTTGGAAGCAGAGGACCCAGACATAAACATTCCGTCTTGGTGGGATAACGGGGACTACATTACGTCCGAGAACTGCCAGTTCACCTTCACAGAATATATTGTCAAGGCCACTGTAGACTCAGTGTTAGTCAAAATATACCAGATGTATTACATTTCGAACCCAGGCCCAGGGTTTCGAATAAAAAACTCAAAAAATAATCGCCGCAATGCTGACTATTAA
Protein Sequence
MSPYFEQQFRVQYLSEAQRNAYLREKAAFLRRLIAMKDHDKMLLTYPIGLYTMHEAVKWQGGYNRVTDWQVVAQICEVQYASEVLDDLYVKFLLEAEDPDINIPSWWDNGDYITSENCQFTFTEYIVKATVDSVLVKIYQMYYISNPGPGFRIKNSKNNRRNADY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-