Basic Information

Gene Symbol
-
Assembly
GCA_018903935.1
Location
JAEIFP010000612.1:4217161-4217866[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.8 8.9e+03 -2.8 0.0 74 85 10 21 4 23 0.75
2 3 8.3e-10 1.1e-06 29.0 0.0 20 89 66 128 52 128 0.81
3 3 0.76 9.9e+02 0.2 0.1 70 86 168 185 151 186 0.68

Sequence Information

Coding Sequence
ATGTTTAAATGCAAAACTTGTGGATTTCAAACAAATATACGAAAAATTTTCAAACGCCACTTGTCGACGCACACCATCGAGTCGGAGATTGAGGACTCAGAACACCCACTGACCATCGAGCCAGAGTCAGCTGAGGAATTGGAGCTCCAATGTGGACTCAAGTGGCAGAGCTTGGCTGGCCAAAAAAAATACTTTTTTAAATCCATACCGCCAGTCGAGGATGACATTGGTGTGGATTTATTCAGTCTCTTTATTTCCGTGGAGGCTCGGGGCGGCTTTGGCAACTCACCCAATTGGGATAACGTGGCTCTCAATTGCAATTTAATGGCGTACCCCTCCAACAAGCTGTCAGGAATTTATAAAAAATTCCTTCTGCAATACGAGGAACAAGAAAGGATCCGACTGCGGGACCTCAAAAAGCGCAATATACCGTTTTGGTGGGACTACGGAGAGTATGTGTGTAAGAGATACCAGCCAGTCCCTCACAAACGAAAGCCCTACGAGAAAGAGACCGTAGAAAACACGCTGTATGAAATTTACTACAAACATTTCATTCCAAGCATTGGAACACGCTTCTGCGTAAAAGACTCCTGGCTCTACGTCGTGGGGATGGACCCGCAGGATTTGGTAGAGTTCATGCGTAGCTTTAAGTAG
Protein Sequence
MFKCKTCGFQTNIRKIFKRHLSTHTIESEIEDSEHPLTIEPESAEELELQCGLKWQSLAGQKKYFFKSIPPVEDDIGVDLFSLFISVEARGGFGNSPNWDNVALNCNLMAYPSNKLSGIYKKFLLQYEEQERIRLRDLKKRNIPFWWDYGEYVCKRYQPVPHKRKPYEKETVENTLYEIYYKHFIPSIGTRFCVKDSWLYVVGMDPQDLVEFMRSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-