Basic Information

Gene Symbol
-
Assembly
GCA_018903935.1
Location
JAEIFP010000150.1:9923297-9923734[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-10 6.5e-07 29.7 0.0 28 89 3 56 1 56 0.88
2 2 0.32 4.2e+02 1.4 0.1 71 86 97 113 79 114 0.73

Sequence Information

Coding Sequence
ATGAATTCAGCTAATGTGTATCTTTTTAGTCTCTTTAATTCCGTGGCGGCTCGTGGAGGCTTTGACAACTCACCCAATTGGGATAACGTGGCTCTAAATTGCAATTTAATGGCGGACCACTCCAAGAAGCTGTCAGGAATTTATAAAAAATTCCTTCTGCAATACGAGGACCAAGAAAAGATCCGACTGCGGGACCTTAAAAGGCGCAATATACCGTTTTGGTGGGACTACGGAGAGTATGTGTGTAAGAGATACCAGCCAGTCCCCTACAGACGAAAGCCCTACGATAAAGAGACCGTAGAAAATACGCTGTATCAAATTTACTACAAACATTTCATTCCAAGCATTGGAACAAGCTTCTGCGTAAAAGACTCCTGGCTCTACGTCGTGAGGATGGACCCGCAGGATTTGGTAGAGTTCATGCGTAGCTTTAAGTAA
Protein Sequence
MNSANVYLFSLFNSVAARGGFDNSPNWDNVALNCNLMADHSKKLSGIYKKFLLQYEDQEKIRLRDLKRRNIPFWWDYGEYVCKRYQPVPYRRKPYDKETVENTLYQIYYKHFIPSIGTSFCVKDSWLYVVRMDPQDLVEFMRSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-